Special Issue "Polyphasic Identification of Fungi 3.0"

A special issue of Journal of Fungi (ISSN 2309-608X).

Deadline for manuscript submissions: 15 September 2023 | Viewed by 552

Special Issue Editors

Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing 655011, China
Interests: fungal taxonomy; fungal phylogeny; Basidiomycota; Ascomycota; fungal pathogens
Special Issues, Collections and Topics in MDPI journals
Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing 655011, China
Interests: fungal taxonomy; fungal phylogeny; fungal pathogens; fungal endophytes; Ascomycota
Special Issues, Collections and Topics in MDPI journals

Special Issue Information

Dear Colleagues,

Fungi are the second-most species-rich group after insects. Thus, it is more challenging to estimate the total number of extant fungi species than that of plants and animals. Fungi play key roles in ecosystems as decomposers, endophytes, mutualists, and pathogens. However, in most cases, the roles of individual fungi in nature are still unknown. Describing and understanding the natural roles of fungal species can help humankind to overcome fungal diseases and better utilize fungal resources. Identification can be a long and seemingly never-ending process, with frequent revisions of the taxonomic schemes, and it is gradually becoming clearer that fungal identification and authentication require a multiple-step approach in order to generate accurate and useful data. This means that it is necessary to combine more traditional phenotypic and physiological approaches with modern molecular biology. Restriction fragment length polymorphism (RFPL), random amplification of polymorphic DNA (RAPD), amplified fragment length polymorphism-PCR (AFLP-PCR), next-generation sequencing (NGS), DNA barcoding, and whole genome sequencing have all been used to distinguish fungal taxa that are difficult to identify using traditional morphological methods. It is assumed that the genotype of a fungal species is only an indirect indication of its phenotype and ecological adaptations. In other words, a fungal species can be defined as the smallest aggregation of populations with a common lineage that share unique diagnosable phenotypic features.

Recently, a so-called polyphasic approach has been developed for the consistent identification and characterization of fungi. The polyphasic approach consists of the use of different techniques based on the systematization of scientific knowledge. Different methodologies used in this approach include micro- and macro-morphology, biochemical analyses, and molecular biology. These methods assist taxonomists in establishing a consolidated species concept.

This Special Issue will focus on the polyphasic identification of fungi. Studies covering the taxonomy, ecology, physiology, and phylogeny of fungi and fungal biodiversity estimates are welcome.

Prof. Dr. Samantha C. Karunarathna
Prof. Dr. Saowaluck Tibpromma
Guest Editors

Manuscript Submission Information

Manuscripts should be submitted online at www.mdpi.com by registering and logging in to this website. Once you are registered, click here to go to the submission form. Manuscripts can be submitted until the deadline. All submissions that pass pre-check are peer-reviewed. Accepted papers will be published continuously in the journal (as soon as accepted) and will be listed together on the special issue website. Research articles, review articles as well as short communications are invited. For planned papers, a title and short abstract (about 100 words) can be sent to the Editorial Office for announcement on this website.

Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Journal of Fungi is an international peer-reviewed open access monthly journal published by MDPI.

Please visit the Instructions for Authors page before submitting a manuscript. The Article Processing Charge (APC) for publication in this open access journal is 2200 CHF (Swiss Francs). Submitted papers should be well formatted and use good English. Authors may use MDPI's English editing service prior to publication or during author revisions.

Keywords

  • epitypification
  • fungal diversity
  • fungal taxonomy
  • fungal phylogeny
  • fungal ecology
  • fungal physiology

Published Papers (1 paper)

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Research

Article
Morphological and Phylogenetic Characterisations Reveal Four New Species in Leptosphaeriaceae (Pleosporales, Dothideomycetes)
J. Fungi 2023, 9(6), 612; https://doi.org/10.3390/jof9060612 - 26 May 2023
Viewed by 373
Abstract
Leptosphaeriaceae is a widely distributed fungal family with diverse lifestyles. The family includes several genera that can be distinguished by morphology and molecular phylogenetic analysis. During our investigation of saprobic fungi on grasslands in Yunnan Province, China, four fungal taxa belonging to Leptosphaeriaceae [...] Read more.
Leptosphaeriaceae is a widely distributed fungal family with diverse lifestyles. The family includes several genera that can be distinguished by morphology and molecular phylogenetic analysis. During our investigation of saprobic fungi on grasslands in Yunnan Province, China, four fungal taxa belonging to Leptosphaeriaceae associated with grasses were collected. Morphological observations and phylogenetic analyses of the combined SSU, LSU, ITS, tub2, and rpb2 loci based on maximum likelihood and Bayesian inference were used to reveal the taxonomic placement of these fungal taxa. This study introduces four new taxa, viz. Leptosphaeria yunnanensis, L. zhaotongensis, Paraleptosphaeria kunmingensis, and Plenodomus zhaotongensis. Colour photo plates, full descriptions, and a phylogenetic tree to show the placement of the new taxa are provided. Full article
(This article belongs to the Special Issue Polyphasic Identification of Fungi 3.0)
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