Metabolic Heterogeneity of Cancer Cells: Protein Turnover and Redox Signaling

A special issue of Metabolites (ISSN 2218-1989). This special issue belongs to the section "Cell Metabolism".

Deadline for manuscript submissions: closed (22 December 2022) | Viewed by 4964

Special Issue Editor


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Guest Editor
I.M. Sechenov First Moscow State Medical University (Sechenov University), 8 Trubetskaya street, 119991 Moscow, Russia
Interests: structure-funstion relationships; protein interaction networks; biomarkers; cancer biology; cancer research; computational and structural biology; artificial intelligence; cell signaling; redox biology

Special Issue Information

Dear Colleagues,

Cancer is a very complex and heterogeneous disease. Cancer heterogeneity is dictated by the variable microenvironment and hybrid population of cell types with distinct gene expression and metabolic profiles, as well as distinct proliferative, angiogenic, and metastatic potential. Data obtained over the last several years with the use of experimental, bioinformatics, and computer/mathematical modeling approaches are increasingly evidencing that cancer cells do not fully rely on anaerobic glycolysis as a source of energy and metabolites. Instead, they can preserve oxidative metabolism and there can be multiple switches between glycolysis and oxidative phosphorylation (OXPHOS). This depends on microenvironmental factors, clinicopathological characteristics, and the degree of vascularization.

The metabolic plasticity of cancer cells requires the involvement of numerous genes, oncogenes and tumor suppressors, transcription factors, cell signaling pathways, and oxygen/energy/nutrient sensors. The activities of these protein factors are maintained at the levels of gene expression, post-translational modification, the ubiquitin-proteasomal pathway, and the autophagy-lysosomal degradation pathway. Different stress conditions are key factors imposed on proliferating tumor cells to trigger their malignant transformation. Prolonged hypoxia and dysregulated redox landscape are among these stress factors, and cancer cells can tolerate them at both transcriptional and post-translational levels to overcome or escape antitumor immune surveillance and to avoid cellular senescence and apoptosis. Hypoxia and nutrient starvation can lead to the increased flux of reactive oxidants that cause the oxidative damage of biomolecules and impaired cellular proteostasis. Various types of reactive oxidants can affect the activities of transcription factors, cell signaling pathways, and protein degradation pathways to trigger cancer progression and metastasis.

This special issue of Metabolites will publish original articles and reviews focused on recent advancements in the field covering cancer metabolism and altered redox landscape. This includes metabolic reprogramming; oxidative phosphorylation; mitochondrial metabolism; cell signaling; protein turnover including biosynthesis, post-translational modification, and degradation; amino acid metabolism; dysregulated redox homeostasis; endoplasmic reticulum stress; genomic, epigenomic, and transcriptomic regulation; and other related topics.

Dr. Nurbubu T. Moldogazieva
Guest Editor

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Keywords

  • Cancer metabolism
  • Metabolic reprogramming
  • Mitochondria
  • Cell signaling
  • Protein turnover
  • Redox homeostasis
  • Tumor microenvironment

Published Papers (2 papers)

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Research

24 pages, 4687 KiB  
Article
20-Hydroxyecdysone Confers Antioxidant and Antineoplastic Properties in Human Non-Small Cell Lung Cancer Cells
by Oleg Shuvalov, Yulia Kirdeeva, Elizaveta Fefilova, Sofia Netsvetay, Mark Zorin, Yulia Vlasova, Olga Fedorova, Alexandra Daks, Sergey Parfenyev and Nickolai Barlev
Metabolites 2023, 13(5), 656; https://doi.org/10.3390/metabo13050656 - 15 May 2023
Cited by 4 | Viewed by 1860
Abstract
20-Hydroxyecdysone (20E) is an arthropod hormone which is synthesized by some plants as part of their defense mechanism. In humans, 20E has no hormonal activity but possesses a number of beneficial pharmacological properties including anabolic, adaptogenic, hypoglycemic, and antioxidant properties, as well as [...] Read more.
20-Hydroxyecdysone (20E) is an arthropod hormone which is synthesized by some plants as part of their defense mechanism. In humans, 20E has no hormonal activity but possesses a number of beneficial pharmacological properties including anabolic, adaptogenic, hypoglycemic, and antioxidant properties, as well as cardio-, hepato-, and neuroprotective features. Recent studies have shown that 20E may also possess antineoplastic activity. In the present study, we reveal the anticancer properties of 20E in Non-Small Cell Lung Cancer (NSCLC) cell lines. 20E displayed significant antioxidant capacities and induced the expression of antioxidative stress response genes. The RNA-seq analysis of 20E-treated lung cancer cells revealed the attenuation of genes involved in different metabolic processes. Indeed, 20E suppressed several enzymes of glycolysis and one-carbon metabolism, as well as their key transcriptional regulators—c-Myc and ATF4, respectively. Accordingly, using the SeaHorse energy profiling approach, we observed the inhibition of glycolysis and respiration mediated by 20E treatment. Furthermore, 20E sensibilized lung cancer cells to metabolic inhibitors and markedly suppressed the expression of Cancer Stem Cells (CSCs) markers. Thus, in addition to the known beneficial pharmacological activities of 20E, our data uncovered novel antineoplastic properties of 20E in NSCLC cells. Full article
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24 pages, 5836 KiB  
Article
Short Linear Motifs Orchestrate Functioning of Human Proteins during Embryonic Development, Redox Regulation, and Cancer
by Susanna S. Sologova, Sergey P. Zavadskiy, Innokenty M. Mokhosoev and Nurbubu T. Moldogazieva
Metabolites 2022, 12(5), 464; https://doi.org/10.3390/metabo12050464 - 21 May 2022
Cited by 3 | Viewed by 2332
Abstract
Short linear motifs (SLiMs) are evolutionarily conserved functional modules of proteins that represent amino acid stretches composed of 3 to 10 residues. The biological activities of two short peptide segments of human alpha-fetoprotein (AFP), a major embryo-specific and cancer-related protein, have been confirmed [...] Read more.
Short linear motifs (SLiMs) are evolutionarily conserved functional modules of proteins that represent amino acid stretches composed of 3 to 10 residues. The biological activities of two short peptide segments of human alpha-fetoprotein (AFP), a major embryo-specific and cancer-related protein, have been confirmed experimentally. This is a heptapeptide segment LDSYQCT in domain I designated as AFP14–20 and a nonapeptide segment EMTPVNPGV in domain III designated as GIP-9. In our work, we searched the UniprotKB database for human proteins that contain SLiMs with sequence similarity to the both segments of human AFP and undertook gene ontology (GO)-based functional categorization of retrieved proteins. Gene set enrichment analysis included GO terms for biological process, molecular function, metabolic pathway, KEGG pathway, and protein–protein interaction (PPI) categories. We identified the SLiMs of interest in a variety of non-homologous proteins involved in multiple cellular processes underlying embryonic development, cancer progression, and, unexpectedly, the regulation of redox homeostasis. These included transcription factors, cell adhesion proteins, ubiquitin-activating and conjugating enzymes, cell signaling proteins, and oxidoreductase enzymes. They function by regulating cell proliferation and differentiation, cell cycle, DNA replication/repair/recombination, metabolism, immune/inflammatory response, and apoptosis. In addition to the retrieved genes, new interacting genes were identified. Our data support the hypothesis that conserved SLiMs are incorporated into non-homologous proteins to serve as functional blocks for their orchestrated functioning. Full article
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