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Stresses, Volume 3, Issue 3 (September 2023) – 9 articles

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12 pages, 2558 KiB  
Article
Preserving the Authenticity of ST25 Rice (Oryza sativa) from the Mekong Delta: A Multivariate Geographical Characterization Approach
by Dinh Tri Bui, Ngoc Minh Truong, Viet Anh Le, Hoang Khanh Nguyen, Quang Minh Bui, Van Thinh Pham and Quang Trung Nguyen
Stresses 2023, 3(3), 653-664; https://doi.org/10.3390/stresses3030045 - 18 Sep 2023
Viewed by 960
Abstract
The research centers around ST25, a recently acclaimed rice variety lauded as Vietnam’s premier offering. However, its ability to substantiate its origin is impeded by the rampant proliferation of counterfeit derivatives within the market. A distinctive methodology is posited herein, intertwining the attributes [...] Read more.
The research centers around ST25, a recently acclaimed rice variety lauded as Vietnam’s premier offering. However, its ability to substantiate its origin is impeded by the rampant proliferation of counterfeit derivatives within the market. A distinctive methodology is posited herein, intertwining the attributes of Fourier Transform Infrared Spectroscopy (FTIR) and Inductively Coupled Plasma Mass Spectrometry (ICP-MS) analyses, augmented using Principal Component Analysis (PCA). The primary objective is to meticulously ascertain the unadulterated geographic provenance of the ST25 rice cultivar. The findings unequivocally underscore the emergence of a conspicuous taxonomy within the ST25 rice samples sourced from Soc Trang, underpinned by the utilization of both FTIR and ICP-MS datasets. Remarkably, the discernment of eight elemental constituents (27Al, 59Co, 44Ca, 57Fe, 60Ni, 63Cu, 93Nb, and 98Mo) has been adjudicated as pivotal in ascribing geospatial classification. The ramifications of this proposed modality encompass not only the authentication of the subject rice variety but also extend to the validation of similar grain types. Functioning as a potent deterrent against the omnipresent specter of food counterfeiting within the market milieu, this methodology occupies a pivotal niche. Full article
(This article belongs to the Collection Feature Papers in Plant and Photoautotrophic Stresses)
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24 pages, 2257 KiB  
Article
Regulatory Effects of GPR158 Overexpression in Trabecular Meshwork Cells of the Eye’s Aqueous Outflow Pathways
by Maria Fernanda Suarez, Tatsuo Itakura, Satyabrata Pany, Shinwu Jeong, Shravan K. Chintala, Michael B. Raizman, Steven Riesinger, Tsvetelina Lazarova, José Echenique, Horacio M. Serra, W. Daniel Stamer and M. Elizabeth Fini
Stresses 2023, 3(3), 629-652; https://doi.org/10.3390/stresses3030044 - 01 Sep 2023
Viewed by 977
Abstract
Elevated intraocular pressure (IOP), the major risk factor for glaucoma, is caused by decreased outflow through the trabecular meshwork (TM). The pathophysiology of ocular hypertension has been linked to stress pathways, including fibrosis, calcification and the unfolded protein response (UPR). In a pharmacogenomic [...] Read more.
Elevated intraocular pressure (IOP), the major risk factor for glaucoma, is caused by decreased outflow through the trabecular meshwork (TM). The pathophysiology of ocular hypertension has been linked to stress pathways, including fibrosis, calcification and the unfolded protein response (UPR). In a pharmacogenomic screen, we previously identified the novel G-protein-coupled receptor (GPCR), GPR158, showed that expression is upregulated in TM cells by glucocorticoid stress hormones, and showed that overexpression protects against oxidative stress. We also found that loss of Gpr158 in knockout mice negates IOP reduction due to treatment with the catecholamine stress hormone, epinephrine. An increase in GPR158 would be expected to alter the activity of GPR158-regulated pathways. Here, we profiled gene expression changes due to GPR158 overexpression by microarray, then conducted pathway analysis. We identified five upstream stress regulators relevant to ocular hypertension: dexamethasone and TGFB1 (fibrosis), XBP1 and ATF4 (UPR), and TP53 (cell cycle arrest). Key genes in the first three pathways were downregulated by GPR158 overexpression, but not enough to inhibit dexamethasone-induced fibrosis or calcification in TM cells, and loss of Gpr158 in knockout mice only minimally protected against dexamethasone-induced ocular hypertension. Depending on dose, GPR158 overexpression down- or upregulated the TP53 pathway, suggesting the mechanism for previously observed effects on cell proliferation. A sixth upstream regulator we identified was a GPCR: the beta-adrenergic receptor ADRB1. Adrenergic receptors serve as targets for IOP-lowering drugs, including epinephrine. These data provide new information about pathways regulated by GPR158. Full article
(This article belongs to the Collection Feature Papers in Human and Animal Stresses)
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14 pages, 3366 KiB  
Article
Paradigm of Well-Orchestrated Pharmacokinetic Properties of Curcuminoids Relative to Conventional Drugs for the Inactivation of SARS-CoV-2 Receptors: An In Silico Approach
by Akhileshwar Kumar Srivastava, Divya Singh, Priya Yadav, Monika Singh, Sandeep Kumar Singh and Ajay Kumar
Stresses 2023, 3(3), 615-628; https://doi.org/10.3390/stresses3030043 - 30 Aug 2023
Cited by 1 | Viewed by 899
Abstract
To cure SARS-CoV-2 infection, the repurposing of conventional antiviral drugs is currently advocated by researchers, though their action is not very effective. The present study, based on in silico methods, was intended to increase the therapeutic potential of conventional drugs: hydroxychloroquine (HCQ), favipiravir [...] Read more.
To cure SARS-CoV-2 infection, the repurposing of conventional antiviral drugs is currently advocated by researchers, though their action is not very effective. The present study, based on in silico methods, was intended to increase the therapeutic potential of conventional drugs: hydroxychloroquine (HCQ), favipiravir (FAV), and remdesivir (REM) by using curcuminoids like curcumin (CUR), bisdemethoxycurcumin (BDMC), and demethoxycurcumin (DMC) as adjunct drugs against SARS-CoV-2 receptor proteins, namely main protease (Mpro) and the S1 receptor-binding domain (RBD). The curcuminoids exhibited similar pharmacokinetic properties to the conventional drugs. The webserver (ANCHOR) predicted greater protein stability for both receptors with a disordered score (<0.5). The molecular docking study showed that the binding energy was highest (−27.47 kcal/mol) for BDMC toward Mpro receptors, while the binding energy of CUR (−20.47 kcal/mol) and DMC (−20.58 kcal/mol) was lower than that of HCQ (−24.58 kcal/mol), FAV (−22.87 kcal/mol), and REM (−23.48 kcal/mol). In the case of S1-RBD, CUR had the highest binding energy (−38.84 kcal/mol) and the lowest was in FAV (−23.77 kcal/mol), whereas HCQ (−35.87 kcal/mol) and REM (−38.44 kcal/mol) had greater binding energy than BDMC (−28.07 kcal/mol) and DMC (−30.29 kcal/mol). Hence, this study envisages that these curcuminoids could be employed in combination therapy with conventional drugs to disrupt the stability of SARS-CoV-2 receptor proteins. Full article
(This article belongs to the Collection Feature Papers in Human and Animal Stresses)
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10 pages, 4410 KiB  
Article
Surprising Effects of Rocking Motion on Leishmania tarentolae Behavior in Culture and Implications for Cell Stress
by Linda M. Ferrence, Akshata Gajula and Marjorie A. Jones
Stresses 2023, 3(3), 605-614; https://doi.org/10.3390/stresses3030042 - 28 Aug 2023
Viewed by 832
Abstract
Leishmania are an understudied genus of parasitic protozoans causing significant health problems for people, particularly in tropical climates. To better understand the growth of Leishmania and potential drug sensitivity implications, the effects of motion on cells grown in vitro were probed. Using a [...] Read more.
Leishmania are an understudied genus of parasitic protozoans causing significant health problems for people, particularly in tropical climates. To better understand the growth of Leishmania and potential drug sensitivity implications, the effects of motion on cells grown in vitro were probed. Using a stock Leishmania tarentolae cell culture, cells were placed in 10 mL of a Brain–Heart Infusion medium in either a non-moving (static) environment or on a flat platform of one of two lab rockers (set at a minimal speed) in a dark environment for 13 days. Also, the addition of 0.5 M of L-Proline was evaluated. Microscopy, cell clumping, cell viability, and secreted acid phosphatase (SAP) activity data were collected. Results show that a constant slow rocking motion changed cell growth, clumping behavior, and detectable SAP activity relative to the no-motion cultures, but this change was dependent on which rocker was used, indicating a complexity in the growth of these cells in culture. Thus, continuous motion affects the stresses placed on the cells during a growth curve under some conditions. The implications of this study lead to questions about the effects of motion on the efficacy of pharmaceutical testing in vitro. Further study of the effects of motion on Leishmania is important. Full article
(This article belongs to the Collection Feature Papers in Human and Animal Stresses)
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19 pages, 2603 KiB  
Article
Assessing Combining Abilities of Popcorn Inbred Lines for Agronomic and Root Traits under Contrasting Water Conditions: Towards Developing Drought-Tolerant Genotypes
by Rosimeire Barboza Bispo, Antônio Teixeira do Amaral Junior, Samuel Henrique Kamphorst, Valter Jário de Lima, Guilherme Ferreira Pena, Talles de Oliveira Santos, Jhean Torres Leite, Flávia Nicácio Viana, Divino Rosa dos Santos Júnior, Danielle Leal Lamêgo, Uéliton Alves de Oliveira, Rodrigo Moreira Ribeiro, Telma Nair Santana Pereira and Shahid Khan
Stresses 2023, 3(3), 586-604; https://doi.org/10.3390/stresses3030041 - 10 Aug 2023
Viewed by 963
Abstract
Developing popcorn genotypes that are adapted to water-deficit conditions is crucial due to the significant impact of this abiotic stress on grain yield. This study aimed to assess the combining abilities of preselected popcorn lines for agronomic and root traits under well-watered and [...] Read more.
Developing popcorn genotypes that are adapted to water-deficit conditions is crucial due to the significant impact of this abiotic stress on grain yield. This study aimed to assess the combining abilities of preselected popcorn lines for agronomic and root traits under well-watered and water-stressed conditions. A circulating diallel analysis was conducted to investigate the effects of the general and specific combining abilities of 10 lines and their respective hybrids for various traits, including productivity, popping expansion, expanded popcorn volume, 100-grain weight, ear length, ear width, support root angle, crown root angle, number of support roots, number of crown roots, density of support roots, and density of crown roots. Non-additive action genes predominantly influenced the agronomic traits under both water conditions. In contrast, the root traits displayed a greater proportion of additive action gene expression under both conditions, despite being significantly affected by the environment. Lines L61, L71, and L76 demonstrated positive and high effects for general combining ability. The hybrids L65/L76, L71/L76, and L61/L75, in addition to exhibiting satisfactory effects of their specific combining ability, also displayed the most favorable phenotypic responses for most agronomic and root traits, making them ideal candidates for inclusion in popcorn breeding programs aiming to develop drought-tolerant genotypes. Full article
(This article belongs to the Collection Feature Papers in Plant and Photoautotrophic Stresses)
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16 pages, 1935 KiB  
Review
An Overview of Plant Phenolics and Their Involvement in Abiotic Stress Tolerance
by Krishna Kumar, Pratima Debnath, Sailendra Singh and Navin Kumar
Stresses 2023, 3(3), 570-585; https://doi.org/10.3390/stresses3030040 - 08 Aug 2023
Cited by 15 | Viewed by 3509
Abstract
Secondary metabolites, such as phenols and salicylic, play a crucial role in the regulation of development and tolerance mechanisms against a wide range of stresses. During adverse conditions such as biotic and abiotic stresses, plants induce the biosynthesis of phenolic compounds to provide [...] Read more.
Secondary metabolites, such as phenols and salicylic, play a crucial role in the regulation of development and tolerance mechanisms against a wide range of stresses. During adverse conditions such as biotic and abiotic stresses, plants induce the biosynthesis of phenolic compounds to provide tolerance. Phenolics are secondary aromatic metabolites synthesized through the shikimate/phenylpropanoid pathway or polyketide acetate/malonate pathway, which produce monomeric and polymeric phenolics. Phenolic compounds in plants not only take part in preventing stresses but also in regulating physiological activities. These compounds significantly regulate both below- and above-ground defense mechanisms. Plants synthesize thousands of phenolic compounds throughout their evolution to survive in changing environments. Environmental factors, such as high light, cold, drought, heavy metals, etc., increase the accumulation of phenolics to neutralize any toxic effects. This review focuses on the biosynthesis of phenolic compounds and their updated studies against abiotic stresses. Full article
(This article belongs to the Collection Feature Papers in Plant and Photoautotrophic Stresses)
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15 pages, 3860 KiB  
Review
Algae Polysaccharides (Carrageenan and Alginate)—A Treasure-Trove of Antiviral Compounds: An In Silico Approach to Identify Potential Candidates for Inhibition of S1-RBD Spike Protein of SARS-CoV2
by Dikshansha Rohilla, Akhileshwar Kumar Srivastava, Rahul Prasad Singh, Priya Yadav, Sandeep Kumar Singh, Dharmendra Kumar, Nikunj Bhardwaj, Mahipal Singh Kesawat, Kapil Deo Pandey and Ajay Kumar
Stresses 2023, 3(3), 555-569; https://doi.org/10.3390/stresses3030039 - 31 Jul 2023
Viewed by 1491
Abstract
For the last three years, the world has faced the unexpected spread of the pandemic of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2). The high mortality rate and ever-changing shape of the virus are the challenging factors in the effective management of SARS-CoV-2. [...] Read more.
For the last three years, the world has faced the unexpected spread of the pandemic of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2). The high mortality rate and ever-changing shape of the virus are the challenging factors in the effective management of SARS-CoV-2. However, in last three years, research communities have made significant progress in developing vaccines and controlling the spread of the pandemic to a certain extent. These vaccines contain the attenuated pathogens, which after application did not kill the virus but protected the human by enhancing the immune system response during pandemic exposure. However, the negative side effects and the high cost of the synthetic vaccines are always of concern for researchers, consumers, and the government. Therefore, as an alternative to synthetic drugs, natural medicines or natural plant products have piqued researchers’ interest. Algae are considered as a treasure house of bioactive compounds such as carotenoids, vitamins, polysaccharides, proteins, etc. These bioactive compounds have been well documented for the treatments of various human ailments such as cancer and cardiovascular diseases. Furthermore, sulfated polysaccharides such as alginate and carrageenan have been reported as having antiviral and immunomodulating properties. Therefore, this review addresses algal polysaccharides, especially alginate and carrageenan, and their application in the treatment of COVID-19. In addition, in silico approaches are discussed for the inhibition of the S1-RBD (receptor-binding domain) of SARS-CoV-2, which attaches to the host receptor ACE2 (angiotensin-converting enzyme 2), and the interaction with the network of relative proteins is also explored, which will help in drug discovery and drug design. Full article
(This article belongs to the Special Issue SARS-CoV-2 and Stresses)
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14 pages, 2373 KiB  
Article
Varietal Differences of Yield, Morphological, and Biochemical Parameters of Allium cepa L. under Precipitation Excess in Different Phenological Phases
by Nadezhda Golubkina, Olga Romanova, Valery Romanov, Leonid Krivenkov, Tatiana Shevchenko, Otilia Cristina Murariu, Lorenzo Vecchietti, Silvia Brindusa Hamburda and Gianluca Caruso
Stresses 2023, 3(3), 541-554; https://doi.org/10.3390/stresses3030038 - 21 Jul 2023
Viewed by 799
Abstract
Flooding is an important factor, decreasing Allium cepa bulb yield and quality. A comparison, in terms of biometrical and biochemical parameters, of five Allium cepa cultivars, grown at two different locations, characterized by contrasting conditions of water availability, i.e., precipitation excess at the [...] Read more.
Flooding is an important factor, decreasing Allium cepa bulb yield and quality. A comparison, in terms of biometrical and biochemical parameters, of five Allium cepa cultivars, grown at two different locations, characterized by contrasting conditions of water availability, i.e., precipitation excess at the end (A) or at the beginning (B) of plant growth, revealed a significant decrease in bulb weight, height, and diameter, and an increase in oxidative stress parameters, such as total antioxidant activity and polyphenol content, monosaccharides, proline, malonic dialdehyde in the condition of excessive soil humidity at the end of the vegetation period (A). Among the five cultivars studied (Zolotnichok, Zolotie cupola, Black prince, Globus, and Myachkovsky), the lowest variations of the above parameters under precipitation excess at cycle end or beginning were recorded in Zolotnichok and Zolotie cupola, which was in accordance with their high adaptability. Cultivar Myachkovsky showed the highest differences of the parameters examined between A and B conditions. Outer scale biochemical parameters demonstrated the highest stability in both regions. The participation of proline, monosaccharides, total polyphenols, and total antioxidant activity in plant defense against hypoxia, caused by waterlogging, was proved by high correlation coefficients between inner scale parameters (‘r’ from +0.714 to +0.920) and the latter with bulb yield (‘r’ from −0.745 to −0.924). High adaptability cultivars (Zolotie cupola, Zolotnichok, Black prince) showed significantly lower MDA inner/outer scales ratio and lipids outer/inner scales ratio compared to cultivars with moderate adaptability in (B) conditions. The results provide important information regarding biochemical peculiarities of Allium cepa in diverse soil humidity, which should be considered in future breeding activities of onion genotypes, characterized by high adaptability to different water excess conditions. Full article
(This article belongs to the Collection Feature Papers in Plant and Photoautotrophic Stresses)
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12 pages, 1579 KiB  
Article
Impacts of Maternal Noise Exposure on Risk of Stillbirth and Oxidative Stress-Induced Neurobehavioral Changes in Offspring
by Archana Arjunan, Dhiraj Kumar Sah and Ravindran Rajan
Stresses 2023, 3(3), 529-540; https://doi.org/10.3390/stresses3030037 - 12 Jul 2023
Viewed by 975
Abstract
Life does not start at birth but at conception. Embryonic development is a particularly difficult period in which genetic and environmental factors can interact to contribute to risk. In utero and early neonatal exposure to maternal stress are linked with psychiatric disorders, and [...] Read more.
Life does not start at birth but at conception. Embryonic development is a particularly difficult period in which genetic and environmental factors can interact to contribute to risk. In utero and early neonatal exposure to maternal stress are linked with psychiatric disorders, and the underlying mechanisms are currently being elucidated. This study examined novel relationships between maternal noise exposure causing oxidative-stress-induced neurobehavioral changes in cognition and autism spectrum disorder (ASD) in offspring. Pregnant Wistar albino rats were exposed to noise (100 dBA/4 h). There were three groups of pregnant rats exposed to noise during gestation, as well as a control group: early gestational stress (EGS), which occurs between the 1st and 10th days of pregnancy; late gestational stress (LGS), which occurs between the 11th day and the delivery day; and full-term gestational stress (FGS), which occurs during the entire pregnancy period. Maternal stress effects on the offspring were analyzed. This study observed that noise exposure becomes a psychosocial stressor in the prenatal period of motherhood. In the EGS and LGS groups, female rats showed continuous midterm abortion and stillbirth during noise exposure. The noise-exposed group exhibited significant changes in cognition, obsessive–compulsive behavior, fear, and anxiety. Corticosterone and oxidative stress markers increased, and the antioxidant level was significantly decreased in the noise-exposed group. Therefore, maternal noise exposure causes recurrent abortions and stillbirths, increases oxidative stress, and impairs the offspring’s neurodevelopment. Full article
(This article belongs to the Collection Feature Papers in Human and Animal Stresses)
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