Host Membranes and the Viral Infection Cycle

A special issue of Viruses (ISSN 1999-4915). This special issue belongs to the section "Animal Viruses".

Deadline for manuscript submissions: closed (31 December 2015) | Viewed by 71397

Special Issue Editor

Department of Internal Medicine, Division of Gastroenterology Department of Microbiology & Immunology University of Michigan 6520 MSRB I SPC 5682 1150 W Medical Center Dr Ann Arbor, MI 48109, USA
Interests: hepatitis C virus, host-pathogen relationships, phosphatidylinositol 4-kinase

Special Issue Information

Dear Colleagues,

All viruses must be able to interact with host membranes at several steps along the infection cycle. In addition to the requirement for viruses to interact with and penetrate cellular membranes for entry, many RNA and some DNA viruses, including all known positive-sense RNA viruses, replicate their genomes in the cytoplasm of their host cell. This is often accompanied by the rearrangement of cellular membranes to form specialized membrane compartments dedicated to viral replication. These viral replication organelles are thought to serve as scaffolds for viral and host replication components and to shield them from innate immune recognition. Finally, many viruses interact with cellular membranes for their assembly and exit from the cell.

The goal of this Special Issue is to highlight advances in our understanding of the various interactions between viruses and host cell membranes.

Andrew W. Tai
Guest Editor

Manuscript Submission Information

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Keywords

  • Viral replication
  • Cellular membranes
  • Lipids
  • Cholesterol
  • Membrane trafficking
  • Viral entry
  • Virus budding
  • Virus secretion

Published Papers (8 papers)

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Research

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3974 KiB  
Article
Glutamic Acid Residues in HIV-1 p6 Regulate Virus Budding and Membrane Association of Gag
by Melanie Friedrich, Christian Setz, Friedrich Hahn, Alina Matthaei, Kirsten Fraedrich, Pia Rauch, Petra Henklein, Maximilian Traxdorf, Torgils Fossen and Ulrich Schubert
Viruses 2016, 8(4), 117; https://doi.org/10.3390/v8040117 - 25 Apr 2016
Cited by 10 | Viewed by 7384
Abstract
The HIV-1 Gag p6 protein regulates the final abscission step of nascent virions from the cell membrane by the action of its two late (l-) domains, which recruit Tsg101 and ALIX, components of the ESCRT system. Even though p6 consists of [...] Read more.
The HIV-1 Gag p6 protein regulates the final abscission step of nascent virions from the cell membrane by the action of its two late (l-) domains, which recruit Tsg101 and ALIX, components of the ESCRT system. Even though p6 consists of only 52 amino acids, it is encoded by one of the most polymorphic regions of the HIV-1 gag gene and undergoes various posttranslational modifications including sumoylation, ubiquitination, and phosphorylation. In addition, it mediates the incorporation of the HIV-1 accessory protein Vpr into budding virions. Despite its small size, p6 exhibits an unusually high charge density. In this study, we show that mutation of the conserved glutamic acids within p6 increases the membrane association of Pr55 Gag followed by enhanced polyubiquitination and MHC-I antigen presentation of Gag-derived epitopes, possibly due to prolonged exposure to membrane bound E3 ligases. The replication capacity of the total glutamic acid mutant E0A was almost completely impaired, which was accompanied by defective virus release that could not be rescued by ALIX overexpression. Altogether, our data indicate that the glutamic acids within p6 contribute to the late steps of viral replication and may contribute to the interaction of Gag with the plasma membrane. Full article
(This article belongs to the Special Issue Host Membranes and the Viral Infection Cycle)
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4395 KiB  
Article
A KDEL Retrieval System for ER-Golgi Transport of Japanese Encephalitis Viral Particles
by Robert YL Wang, Yu-Jen Wu, Han-Shan Chen and Chih-Jung Chen
Viruses 2016, 8(2), 44; https://doi.org/10.3390/v8020044 - 05 Feb 2016
Cited by 8 | Viewed by 6860
Abstract
Evidence has emerged that RNA viruses utilize the host secretory pathway for processing and trafficking mature viral particles and for exiting the infected cells. Upon completing the complex assembly process, the viral particles take advantage of the cellular secretory trafficking machinery for their [...] Read more.
Evidence has emerged that RNA viruses utilize the host secretory pathway for processing and trafficking mature viral particles and for exiting the infected cells. Upon completing the complex assembly process, the viral particles take advantage of the cellular secretory trafficking machinery for their intracellular trafficking toward the Golgi organelle and budding or export of virions. In this study, we showed that Japanese encephalitis virus (JEV)-induced extracellular GRP78 contains no KDEL motif using an anti-KDEL-specific antibody. Overexpression of the KDEL-truncated GRP78 in the GPR78 knocked down cells significantly reduced JEV infectivity, suggesting that the KDEL motif is required for GRP78 function in the release of JE viral particles. In addition, we demonstrated the KDELR protein, an ER-Golgi retrieval system component, is associated with viral envelope proteins and is engaged in the subcellular localization of viral particles in Golgi. More importantly, accumulation of intracellular virions was observed in the KDELR knocked down cells, indicating that the KDELR protein mediated the intracellular trafficking of JE viral particles. Altogether, we demonstrated that intracellular trafficking of JE assembled viral particles was mediated by the host ER-Golgi retrieval system prior to exit by the secretory pathway. Full article
(This article belongs to the Special Issue Host Membranes and the Viral Infection Cycle)
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Review

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4080 KiB  
Review
Endoplasmic Reticulum: The Favorite Intracellular Niche for Viral Replication and Assembly
by Inés Romero-Brey and Ralf Bartenschlager
Viruses 2016, 8(6), 160; https://doi.org/10.3390/v8060160 - 07 Jun 2016
Cited by 124 | Viewed by 14834
Abstract
The endoplasmic reticulum (ER) is the largest intracellular organelle. It forms a complex network of continuous sheets and tubules, extending from the nuclear envelope (NE) to the plasma membrane. This network is frequently perturbed by positive-strand RNA viruses utilizing the ER to create [...] Read more.
The endoplasmic reticulum (ER) is the largest intracellular organelle. It forms a complex network of continuous sheets and tubules, extending from the nuclear envelope (NE) to the plasma membrane. This network is frequently perturbed by positive-strand RNA viruses utilizing the ER to create membranous replication factories (RFs), where amplification of their genomes occurs. In addition, many enveloped viruses assemble progeny virions in association with ER membranes, and viruses replicating in the nucleus need to overcome the NE barrier, requiring transient changes of the NE morphology. This review first summarizes some key aspects of ER morphology and then focuses on the exploitation of the ER by viruses for the sake of promoting the different steps of their replication cycles. Full article
(This article belongs to the Special Issue Host Membranes and the Viral Infection Cycle)
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1645 KiB  
Review
Mechanisms of Cellular Membrane Reorganization to Support Hepatitis C Virus Replication
by Hongliang Wang and Andrew W. Tai
Viruses 2016, 8(5), 142; https://doi.org/10.3390/v8050142 - 20 May 2016
Cited by 22 | Viewed by 6154
Abstract
Like all positive-sense RNA viruses, hepatitis C virus (HCV) induces host membrane alterations for its replication termed the membranous web (MW). Assembling replication factors at a membranous structure might facilitate the processes necessary for genome replication and packaging and shield viral components from [...] Read more.
Like all positive-sense RNA viruses, hepatitis C virus (HCV) induces host membrane alterations for its replication termed the membranous web (MW). Assembling replication factors at a membranous structure might facilitate the processes necessary for genome replication and packaging and shield viral components from host innate immune defenses. The biogenesis of the HCV MW is a complex process involving a concerted effort of HCV nonstructural proteins with a growing list of host factors. Although a comprehensive understanding of MW formation is still missing, a number of important viral and host determinants have been identified. This review will summarize the recent studies that have led to our current knowledge of the role of viral and host factors in the biogenesis of the MWs and discuss how HCV uses this specialized membrane structure for its replication. Full article
(This article belongs to the Special Issue Host Membranes and the Viral Infection Cycle)
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528 KiB  
Review
Determinants of the Bovine Leukemia Virus Envelope Glycoproteins Involved in Infectivity, Replication and Pathogenesis
by Alix De Brogniez, Jan Mast and Luc Willems
Viruses 2016, 8(4), 88; https://doi.org/10.3390/v8040088 - 24 Mar 2016
Cited by 14 | Viewed by 5454
Abstract
Interaction of viral envelope proteins with host cell membranes has been extensively investigated in a number of systems. However, the biological relevance of these interactions in vivo has been hampered by the absence of adequate animal models. Reverse genetics using the bovine leukemia [...] Read more.
Interaction of viral envelope proteins with host cell membranes has been extensively investigated in a number of systems. However, the biological relevance of these interactions in vivo has been hampered by the absence of adequate animal models. Reverse genetics using the bovine leukemia virus (BLV) genome highlighted important functional domains of the envelope protein involved in the viral life cycle. For example, immunoreceptor tyrosine-based activation motifs (ITAM) of the envelope transmembrane protein (TM) are essential determinants of infection. Although cell fusion directed by the aminoterminal end of TM is postulated to be essential, some proviruses expressing fusion-deficient envelope proteins unexpectedly replicate at wild-type levels. Surprisingly also, a conserved N-linked glycosylation site of the extracellular envelope protein (SU) inhibits cell-to-cell transmission suggesting that infectious potential has been limited during evolution. In this review, we summarize the knowledge pertaining to the BLV envelope protein in the context of viral infection, replication and pathogenesis. Full article
(This article belongs to the Special Issue Host Membranes and the Viral Infection Cycle)
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2456 KiB  
Review
Recycling Endosomes and Viral Infection
by Sílvia Vale-Costa and Maria João Amorim
Viruses 2016, 8(3), 64; https://doi.org/10.3390/v8030064 - 08 Mar 2016
Cited by 46 | Viewed by 11187
Abstract
Many viruses exploit specific arms of the endomembrane system. The unique composition of each arm prompts the development of remarkably specific interactions between viruses and sub-organelles. This review focuses on the viral–host interactions occurring on the endocytic recycling compartment (ERC), and mediated by [...] Read more.
Many viruses exploit specific arms of the endomembrane system. The unique composition of each arm prompts the development of remarkably specific interactions between viruses and sub-organelles. This review focuses on the viral–host interactions occurring on the endocytic recycling compartment (ERC), and mediated by its regulatory Ras-related in brain (Rab) GTPase Rab11. This protein regulates trafficking from the ERC and the trans-Golgi network to the plasma membrane. Such transport comprises intricate networks of proteins/lipids operating sequentially from the membrane of origin up to the cell surface. Rab11 is also emerging as a critical factor in an increasing number of infections by major animal viruses, including pathogens that provoke human disease. Understanding the interplay between the ERC and viruses is a milestone in human health. Rab11 has been associated with several steps of the viral lifecycles by unclear processes that use sophisticated diversified host machinery. For this reason, we first explore the state-of-the-art on processes regulating membrane composition and trafficking. Subsequently, this review outlines viral interactions with the ERC, highlighting current knowledge on viral-host binding partners. Finally, using examples from the few mechanistic studies available we emphasize how ERC functions are adjusted during infection to remodel cytoskeleton dynamics, innate immunity and membrane composition. Full article
(This article belongs to the Special Issue Host Membranes and the Viral Infection Cycle)
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1080 KiB  
Review
Cell-Free and Cell-Based Approaches to Explore the Roles of Host Membranes and Lipids in the Formation of Viral Replication Compartment Induced by Tombusviruses
by Peter D. Nagy, Judit Pogany and Kai Xu
Viruses 2016, 8(3), 68; https://doi.org/10.3390/v8030068 - 03 Mar 2016
Cited by 21 | Viewed by 6979
Abstract
Plant positive strand RNA viruses are intracellular infectious agents that take advantage of cellular lipids and membranes to support replication and protect viral RNA from degradation by host antiviral responses. In this review, we discuss how Tomato bushy stunt virus (TBSV) co-opts lipid [...] Read more.
Plant positive strand RNA viruses are intracellular infectious agents that take advantage of cellular lipids and membranes to support replication and protect viral RNA from degradation by host antiviral responses. In this review, we discuss how Tomato bushy stunt virus (TBSV) co-opts lipid transfer proteins and modulates lipid metabolism and transport to facilitate the assembly of the membrane-bound viral replicase complexes within intricate replication compartments. Identification and characterization of the proviral roles of specific lipids and proteins involved in lipid metabolism based on results from yeast (Saccharomyces cerevisiae) model host and cell-free approaches are discussed. The review also highlights the advantage of using liposomes with chemically defined composition to identify specific lipids required for TBSV replication. Remarkably, all the known steps in TBSV replication are dependent on cellular lipids and co-opted membranes. Full article
(This article belongs to the Special Issue Host Membranes and the Viral Infection Cycle)
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1266 KiB  
Review
Remodeling of the Host Cell Plasma Membrane by HIV-1 Nef and Vpu: A Strategy to Ensure Viral Fitness and Persistence
by Scott M. Sugden, Mariana G. Bego, Tram N.Q. Pham and Éric A. Cohen
Viruses 2016, 8(3), 67; https://doi.org/10.3390/v8030067 - 03 Mar 2016
Cited by 40 | Viewed by 11602
Abstract
The plasma membrane protects the cell from its surroundings and regulates cellular communication, homing, and metabolism. Not surprisingly, the composition of this membrane is highly controlled through the vesicular trafficking of proteins to and from the cell surface. As intracellular pathogens, most viruses [...] Read more.
The plasma membrane protects the cell from its surroundings and regulates cellular communication, homing, and metabolism. Not surprisingly, the composition of this membrane is highly controlled through the vesicular trafficking of proteins to and from the cell surface. As intracellular pathogens, most viruses exploit the host plasma membrane to promote viral replication while avoiding immune detection. This is particularly true for the enveloped human immunodeficiency virus (HIV), which assembles and obtains its lipid shell directly at the plasma membrane. HIV-1 encodes two proteins, negative factor (Nef) and viral protein U (Vpu), which function primarily by altering the quantity and localization of cell surface molecules to increase virus fitness despite host antiviral immune responses. These proteins are expressed at different stages in the HIV-1 life cycle and employ a variety of mechanisms to target both unique and redundant surface proteins, including the viral receptor CD4, host restriction factors, immunoreceptors, homing molecules, tetraspanins and membrane transporters. In this review, we discuss recent progress in the study of the Nef and Vpu targeting of host membrane proteins with an emphasis on how remodeling of the cell membrane allows HIV-1 to avoid host antiviral immune responses leading to the establishment of systemic and persistent infection. Full article
(This article belongs to the Special Issue Host Membranes and the Viral Infection Cycle)
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