The Role of Plant Organellar Genomes in Plant Development and Responses to Environmental Stimuli

A special issue of Plants (ISSN 2223-7747). This special issue belongs to the section "Plant Genetics, Genomics and Biotechnology".

Deadline for manuscript submissions: closed (10 April 2022) | Viewed by 2961

Special Issue Editor


E-Mail
Guest Editor
Radiation Breeding Research Team, Korea Atomic Energy Research Institute, Jeongeup-si 56212, Republic of Korea
Interests: plant organella genome; cytoplasmic male sterility; mutagenesis; radiation biology; mutation breeding; solanaceae crops

Special Issue Information

Dear Colleagues,

Mitochondria and chloroplast are cellular organelles that have been regarded to have originated by endosymbiosis. Due to their long-lasting symbiotic relationship, these organelles are profoundly involved in the genetic and biochemical function of cells. In plants, mitochondria and chloroplast are not only dedicated to their well-known roles, which are respiration and photosynthesis, respectively, but also take part in other important processes in plant development and responses to environmental stimuli. These functions rely on interactions between nuclear and organellar genomes as well as direct actions of genes coded by organellar genomes. Therefore, understanding of organellar genomes and their interaction with nuclear genome is one of the fundamental issues in plant biology.

In comparison to the relationship between phenotypes and nuclear genomes, the phenotypes caused by organellar genomes or their interaction with the nuclear genome have not been analyzed in depth in plants. Extremely limited segregation of polymorphic sequences by crosses and lack of efficient mutagenesis or transformation technologies have been obstacles of functional genomics study in organelles. In addition, the complicated structure of the plant mitochondrial genome has long hampered reliable sequencing analysis and estimation of the genome composition in vivo. However, recent improvements in sequencing technologies, targeted mutagenesis methodologies, and phenotype analysis systems are providing new opportunities to get answers to problems that have not been solved for a long time in the field of organellar functional genomics.

In this Special Issue, we focus on the role of organellar genomes in plant development and responses to environmental stimuli. We also welcome research on methodologies to enhance the efficiency of functional genomics studies for plant organelles, and on the analysis of interactions between nuclear and organellar genomes.

Dr. Yeong Deuk Jo
Guest Editor

Manuscript Submission Information

Manuscripts should be submitted online at www.mdpi.com by registering and logging in to this website. Once you are registered, click here to go to the submission form. Manuscripts can be submitted until the deadline. All submissions that pass pre-check are peer-reviewed. Accepted papers will be published continuously in the journal (as soon as accepted) and will be listed together on the special issue website. Research articles, review articles as well as short communications are invited. For planned papers, a title and short abstract (about 100 words) can be sent to the Editorial Office for announcement on this website.

Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Plants is an international peer-reviewed open access semimonthly journal published by MDPI.

Please visit the Instructions for Authors page before submitting a manuscript. The Article Processing Charge (APC) for publication in this open access journal is 2700 CHF (Swiss Francs). Submitted papers should be well formatted and use good English. Authors may use MDPI's English editing service prior to publication or during author revisions.

Keywords

  • mitochondria
  • chloroplast
  • nuclear–cytoplasmic interaction
  • organella genome
  • plant phenotype

Published Papers (1 paper)

Order results
Result details
Select all
Export citation of selected articles as:

Research

11 pages, 2154 KiB  
Article
The Insights into Mitochondrial Genomes of Sunflowers
by Maksim S. Makarenko, Denis O. Omelchenko, Alexander V. Usatov and Vera A. Gavrilova
Plants 2021, 10(9), 1774; https://doi.org/10.3390/plants10091774 - 26 Aug 2021
Cited by 7 | Viewed by 2264
Abstract
The significant difference in the mtDNA size and structure with simultaneous slow evolving genes makes the mitochondrial genome paradoxical among all three DNA carriers in the plant cell. Such features make mitochondrial genome investigations of particular interest. The genus Helianthus is a diverse [...] Read more.
The significant difference in the mtDNA size and structure with simultaneous slow evolving genes makes the mitochondrial genome paradoxical among all three DNA carriers in the plant cell. Such features make mitochondrial genome investigations of particular interest. The genus Helianthus is a diverse taxonomic group, including at least two economically valuable species—common sunflower (H. annuus) and Jerusalem artichoke (H. tuberosus). The successful investigation of the sunflower nuclear genome provided insights into some genomics aspects and significantly intensified sunflower genetic studies. However, the investigations of organelles’ genetic information in Helianthus, especially devoted to mitochondrial genomics, are presented by limited studies. Using NGS sequencing, we assembled the complete mitochondrial genomes for H. occidentalis (281,175 bp) and H. tuberosus (281,287 bp) in the current investigation. Besides the master circle chromosome, in the case of H. tuberosus, the 1361 bp circular plasmid was identified. The mitochondrial gene content was found to be identical for both sunflower species, counting 32 protein-coding genes, 3 rRNA, 23 tRNA genes, and 18 ORFs. The comparative analysis between perennial sunflowers revealed common and polymorphic SSR and SNPs. Comparison of perennial sunflowers with H. annuus allowed us to establish similar rearrangements in mitogenomes, which have possibly been inherited from a common ancestor after the divergence of annual and perennial sunflower species. It is notable that H. occidentalis and H. tuberosus mitogenomes are much more similar to H. strumosus than H. grosseserratus. Full article
Show Figures

Figure 1

Back to TopTop