Function of Non-coding RNA in Plants

A special issue of Plants (ISSN 2223-7747). This special issue belongs to the section "Plant Molecular Biology".

Deadline for manuscript submissions: closed (25 October 2022) | Viewed by 4978

Special Issue Editors


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Guest Editor

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Guest Editor
CONACYT - Centro de Investigación en Alimentación y Desarrollo, A.C., Coordinación de Tecnología de Alimentos de Origen Vegetal, Carretera Gustavo Enrique Astiazarán Rosas No. 46. Colonia La Victoria, Hermosillo C.P. 83304, Sonora, México
Interests: molecular biology; genomics; transcriptomics; gene expression; plant biology

Special Issue Information

Dear Colleagues,

The discovery and study of non-coding RNA genetic elements is an emerging field in plants. Non-coding RNA genes are transcribed into RNA but not translated because they do not code for a protein. They can show a constitutive expression, such as tRNA and rRNA, or play a regulatory role in the cell. Noncoding RNAs playing a regulatory role are divided into small non-coding RNA (e.g., miRNA, siRNA and piRNA) and long non-coding RNA. Long non-coding RNA genes can be located within introns, intergenic regions as well as in the antisense DNA strand. Although they have the same structural features of the protein-coding genes, they do not share the same sequence, and it seems that rather the secondary structure is conserved. Furthermore, non-coding RNAs can play a role in regulating eukaryotic gene expression at the transcriptional and post-transcriptional levels to control several phenomena in plants. In this regard, it had been found that they can regulate flowering, root and leaf development, cuticle biosynthesis, cell wall synthesis, seed germination, response to biotic and abiotic stress, fruit development and ripening, and potentially fruit shelf life. Although most of the physiological roles mentioned had been found in plant vegetative tissue, it is known that the knowledge developed studying plant tissues usually is found to be similar in fruits tissues. In this Special Issue, the experimental evidence generated to determine the role of these genetic elements in fruit physiology, biochemistry and molecular biology is presented.

Prof. Dr. Martín-Ernesto Tiznado-Hernández
Dr. Miguel Ángel Hernández-Oñate
Guest Editor

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Keywords

  • genes
  • regulation
  • non-coding RNA
  • fruits
  • RNA-seq
  • physiology
  • molecular biology
  • biochemistry

Published Papers (2 papers)

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Review

23 pages, 1918 KiB  
Review
Coordinating Diverse Functions of miRNA and lncRNA in Fleshy Fruit
by Reqing He, Yajun Tang and Dong Wang
Plants 2023, 12(2), 411; https://doi.org/10.3390/plants12020411 - 16 Jan 2023
Cited by 1 | Viewed by 2174
Abstract
Non-coding RNAs play vital roles in the diverse biological processes of plants, and they are becoming key topics in horticulture research. In particular, miRNAs and long non-coding RNAs (lncRNAs) are receiving increased attention in fruit crops. Recent studies in horticulture research provide both [...] Read more.
Non-coding RNAs play vital roles in the diverse biological processes of plants, and they are becoming key topics in horticulture research. In particular, miRNAs and long non-coding RNAs (lncRNAs) are receiving increased attention in fruit crops. Recent studies in horticulture research provide both genetic and molecular evidence that miRNAs and lncRNAs regulate biological function and stress responses during fruit development. Here, we summarize multiple regulatory modules of miRNAs and lncRNAs and their biological roles in fruit sets and stress responses, which would guide the development of molecular breeding techniques on horticultural crops. Full article
(This article belongs to the Special Issue Function of Non-coding RNA in Plants)
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14 pages, 1289 KiB  
Review
Insights into Mobile Small-RNAs Mediated Signaling in Plants
by Yan Yan
Plants 2022, 11(22), 3155; https://doi.org/10.3390/plants11223155 - 18 Nov 2022
Cited by 3 | Viewed by 2156
Abstract
In higher plants, small RNA (sRNA)-mediated RNA interfering (RNAi) is involved in a broad range of biological processes. Growing evidence supports the model that sRNAs are mobile signaling agents that move intercellularly, systemically and cross-species. Recently, considerable progress has been made in terms [...] Read more.
In higher plants, small RNA (sRNA)-mediated RNA interfering (RNAi) is involved in a broad range of biological processes. Growing evidence supports the model that sRNAs are mobile signaling agents that move intercellularly, systemically and cross-species. Recently, considerable progress has been made in terms of characterization of the mobile sRNAs population and their function. In this review, recent progress in identification of new mobile sRNAs is assessed. Here, critical questions related to the function of these mobile sRNAs in coordinating developmental, physiological and defense-related processes is discussed. The forms of mobile sRNAs and the underlying mechanisms mediating sRNA trafficking are discussed next. A concerted effort has been made to integrate these new findings into a comprehensive overview of mobile sRNAs signaling in plants. Finally, potential important areas for both basic science and potential applications are highlighted for future research. Full article
(This article belongs to the Special Issue Function of Non-coding RNA in Plants)
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