Agrobiodiversity and Plant Genetic Resources for Sustainable Agriculture and Healthy Food Systems

A special issue of Plants (ISSN 2223-7747). This special issue belongs to the section "Plant Genetics, Genomics and Biotechnology".

Deadline for manuscript submissions: closed (31 January 2024) | Viewed by 4433

Special Issue Editors


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Guest Editor
Dipartimento di Scienze Agrarie, Alimentari e Ambientali—D3A, Università Politecnica delle Marche (UNIVPM), 60131 Ancona, Italy
Interests: plant breeding; evolutionary genetics; genomics; domestication and crop evolution; agrobiodiversity and plant genetic resources conservation; adaptation; agroecology, food legumes; cereal
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Guest Editor
Council for Agricultural Research and Economics (CREA), Research Centre for Cereal and Industrial Crops, S.S. 673, 71122 Foggia, Italy
Interests: metabolomics, primary and secondary metabolites, evolutionary metabolomics, biodiversity and plant genetic resources, genotype by environment interaction, cereals
Special Issues, Collections and Topics in MDPI journals

Special Issue Information

Dear Colleagues,

Biodiversity loss and the climate crisis represent major current challenges for humankind, which also negatively impact agriculture and food systems. Considering agriculture and other related activities, this dramatic scenario alongside the erosion of crop biodiversity has led us to a watershed in terms of preserving the available genetic diversity of plant species and agroecosystems. The efficient conservation and management of plant genetic resources has become even more crucial than before, since genetically diverse plant species, including their wild relatives, represent a valuable resource that should be utilized. Indeed, the preservation and valorization of genetic resources are the key elements that will guarantee healthy and sustainable food systems, and will aid in identifying genetic materials with improved adaptation and desirable interactions in different environments. Finally, the identification of suitable resources for food production in light of different agroecosystems, sustainable agricultural management practices, consumer preferences, and transformation processes must be considered, especially in regard to new plant-based products and agroecological approaches. Currently, only a few species make up most of the calories in the human diet worldwide; for many of these species, only limited varieties are accessible on the food market, while millions of accessions are stored in gene banks, on farms, or are preserved, but without the characterization that is required for their utilization.

Thus, this Special Issue in Plants will highlight relevant research papers, as well as methodological and review articles that are focused on the following:

  • The identification and evaluation of the best strategies and tools for the conservation, management, valorization, and utilization of plant genetic resources for food and agriculture, including citizen science and participatory approaches.
  • The assessment of agrobiodiversity and the genetic diversity of PGR for their potential value in agriculture and for sustainable and healthy food systems using any available and appropriate approaches that exploit various disciplines, including (but not limited to) genetics, population genetics, plant breeding, agroecology, ecology, nutrition, and various omics approaches.
  • Additionally, considering the previously mentioned aspects, works aimed at addressing normative and legal issues related to plant property rights will be also most welcome.

Dr. Roberto Papa
Dr. Beleggia Romina
Guest Editors

Manuscript Submission Information

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Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Plants is an international peer-reviewed open access semimonthly journal published by MDPI.

Please visit the Instructions for Authors page before submitting a manuscript. The Article Processing Charge (APC) for publication in this open access journal is 2700 CHF (Swiss Francs). Submitted papers should be well formatted and use good English. Authors may use MDPI's English editing service prior to publication or during author revisions.

Keywords

  • plant biodiversity
  • genetic resources
  • genetic variability
  • plant evolution

Published Papers (1 paper)

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Review

16 pages, 1866 KiB  
Review
Challenges and Opportunities behind the Use of Herbaria in Paleogenomics Studies
by Simone Papalini, Valerio Di Vittori, Alice Pieri, Marina Allegrezza, Giulia Frascarelli, Laura Nanni, Elena Bitocchi, Elisa Bellucci, Tania Gioia, Luis Guasch Pereira, Karolina Susek, Maud Tenaillon, Kerstin Neumann and Roberto Papa
Plants 2023, 12(19), 3452; https://doi.org/10.3390/plants12193452 - 30 Sep 2023
Cited by 1 | Viewed by 4182
Abstract
Paleogenomics focuses on the recovery, manipulation, and analysis of ancient DNA (aDNA) from historical or long-dead organisms to reconstruct and analyze their genomes. The aDNA is commonly obtained from remains found in paleontological and archaeological sites, conserved in museums, and in other archival [...] Read more.
Paleogenomics focuses on the recovery, manipulation, and analysis of ancient DNA (aDNA) from historical or long-dead organisms to reconstruct and analyze their genomes. The aDNA is commonly obtained from remains found in paleontological and archaeological sites, conserved in museums, and in other archival collections. Herbarium collections represent a great source of phenotypic and genotypic information, and their exploitation has allowed for inference and clarification of previously unsolved taxonomic and systematic relationships. Moreover, herbarium specimens offered a new source for studying phenological traits in plants and for disentangling biogeography and evolutionary scenarios of species. More recently, advances in molecular technologies went in parallel with the decreasing costs of next-generation sequencing (NGS) approaches, which paved the way to the utilization of aDNA for whole-genome studies. Although many studies have been carried out combining modern analytic techniques and ancient samples, such as herbarium specimens, this research field is still relatively unexplored due to the need for improving strategies for aDNA manipulation and exploitation from ancient samples. The higher susceptibility of aDNA to degradation and contamination during herbarium conservation and manipulation and the occurrence of biochemical postmortem damage can result in a more challenging reconstruction of the original DNA sequence. Here, we review the methodological approaches that have been developed for the exploitation of historical herbarium plant materials, such as best practices for aDNA extraction, amplification, and genotyping. We also focus on some strategies to overcome the main problems related to the utilization of herbarium specimens for their exploitation in plant evolutionary studies. Full article
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