Microbial Community Structure and Metabolic Networks in Polar Areas

A special issue of Life (ISSN 2075-1729). This special issue belongs to the section "Microbiology".

Deadline for manuscript submissions: closed (26 March 2021) | Viewed by 4200

Special Issue Editor


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Guest Editor
Centro de Astrobiologia (CSIC-INTA)
Interests: microbiology in cold environments

Special Issue Information

Dear Colleagues,

Polar regions have attracted the attention of researchers as they are one of the main climate engines of our planet. The arctic and antarctic zones are undergoing drastic changes due to their high sensitivity to global warming. High altitude areas have been successfully colonized by numerous microorganisms specially adapted to extreme environments. The microbial community structure in polar areas is highly vulnerable to changes in climate. These regions are not only rich in biodiversity, but also in new mechanisms of adaptation to the environment since selection acts with a special intensity. These features make them unique for the study and protection of the biological heritage.

The study of the metabolic potential of polar microorganisms has considerably developed due to molecular techniques such as genomics, transcriptomics, and proteomics. Metabolic networks that have been identified in microorganisms from polar regions are of interest for various reasons: (i) these microorganisms are one of the main pillars in polar ecosystems since they are the base of food webs; (ii) the study of their metabolic networks allows the establishment of their relationship with biogeochemical cycles in polar regions; (iii) they are of interest in industry since they contain molecular machines that have been used in disciplines such as biotechnology, clinical research, or food technology; and (iv) the microorganisms of polar regions are able to maintain an active metabolism at below zero temperatures, making them an object of study in many research fields including astrobiology.

This Special Issue focuses on all these aspects in a collection of both reviews and original articles concerning ecology, community structure, and metabolic networks of microorganisms in polar areas and their implication in other areas such as biotechnology and astrobiology.

Dr. Cristina Cid
Guest Editor

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Keywords

  • Microbiology
  • Arctic
  • Antarctic
  • Poles
  • Genomics
  • Proteomics
  • Cell cultures
  • Community structure
  • Metabolic networks
  • Biogeochemical cycles

Published Papers (1 paper)

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Research

20 pages, 1676 KiB  
Article
Assessing Viral Abundance and Community Composition in Four Contrasting Regions of the Southern Ocean
by Ana Sotomayor-Garcia, Maria Montserrat Sala, Isabel Ferrera, Marta Estrada, Evaristo Vázquez-Domínguez, Mikhail Emelianov, Pau Cortés, Cèlia Marrasé, Eva Ortega-Retuerta, Sdena Nunes, Yaiza M. Castillo, Maria Serrano Cuerva, Marta Sebastián, Manuel Dall’Osto, Rafel Simó and Dolors Vaqué
Life 2020, 10(7), 107; https://doi.org/10.3390/life10070107 - 05 Jul 2020
Cited by 10 | Viewed by 3821
Abstract
We explored how changes of viral abundance and community composition among four contrasting regions in the Southern Ocean relied on physicochemical and microbiological traits. During January–February 2015, we visited areas north and south of the South Orkney Islands (NSO and SSO) characterized by [...] Read more.
We explored how changes of viral abundance and community composition among four contrasting regions in the Southern Ocean relied on physicochemical and microbiological traits. During January–February 2015, we visited areas north and south of the South Orkney Islands (NSO and SSO) characterized by low temperature and salinity and high inorganic nutrient concentration, north of South Georgia Island (NSG) and west of Anvers Island (WA), which have relatively higher temperatures and lower inorganic nutrient concentrations. Surface viral abundance (VA) was highest in NSG (21.50 ± 10.70 × 106 viruses mL−1) and lowest in SSO (2.96 ± 1.48 × 106 viruses mL−1). VA was positively correlated with temperature, prokaryote abundance and prokaryotic heterotrophic production, chlorophyll a, diatoms, haptophytes, fluorescent organic matter, and isoprene concentration, and was negatively correlated with inorganic nutrients (NO3−, SiO42−, PO43−), and dimethyl sulfide (DMS) concentrations. Viral communities determined by randomly amplified polymorphic DNA–polymerase chain reaction (RAPD-PCR) were grouped according to the sampling location, being more similar within them than among regions. The first two axes of a canonical correspondence analysis, including physicochemical (temperature, salinity, inorganic nutrients—NO3−, SiO42−, and dimethyl sulfoniopropionate -DMSP- and isoprene concentrations) and microbiological (chlorophyll a, haptophytes and diatom, and prokaryote abundance and prokaryotic heterotrophic production) factors accounted for 62.9% of the variance. The first axis, temperature-related, accounted for 33.8%; the second one, salinity-related, accounted for 29.1%. Thus, different environmental situations likely select different hosts for viruses, leading to distinct viral communities. Full article
(This article belongs to the Special Issue Microbial Community Structure and Metabolic Networks in Polar Areas)
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