Phylogeny and Taxonomy of Lichen Symbionts

A special issue of Plants (ISSN 2223-7747). This special issue belongs to the section "Plant Systematics, Taxonomy, Nomenclature and Classification".

Deadline for manuscript submissions: closed (31 January 2024) | Viewed by 2674

Special Issue Editors


E-Mail Website
Guest Editor
Faculty of Biology, Altai State University, Barnaul 656049, Russia
Interests: lichen systematics and phylogeny; Umbilicariaceae; epilithic lichens of Asian mountains; protection of lichens

E-Mail Website
Guest Editor
Institute of Natural Sciences and Mathematics, Ural Federal University, Yekaterinburg 620000, Russia
Interests: lichen systematics and phylogeny; Megasporaceae; biodiversity and ecology of lichens

E-Mail Website
Guest Editor
School of Agriculture, Forestry, Food and Environment, University of Basilicata, 85100 Potenza, Italy
Interests: lichen; environmental monitoring; habitat; biodiversity
Special Issues, Collections and Topics in MDPI journals

Special Issue Information

Dear Colleagues,

We are pleased to announce a new Special Issue, “Phylogeny and Taxonomy of Lichen Symbionts”, in Plants (Q1 in Plant Science and Q1 in Ecology, Evolution, Behavior and Systematics).

Lichens represent symbioses between specialized fungi (mycobionts), namely, green algae or cyanobacteria (photobionts). Since molecular phylogenetics has become widely used in systematics, the knowledge on the taxonomy of fungal and algal associates in lichen thalli has changed significantly. Over the past 10–15 years, many lichen-forming families, and especially genera, have been found to be polyphyletic, and their concepts have subsequently been emended.

The implementation of the phylogenomic methodology into the taxonomical investigations has resulted in a re-evaluation of the taxonomical significance of traditional (anatomical, morphological, and biochemical) characters, as well as the improvement in the distinction of species. However, biologically important traditional characters still remain relevant for taxonomists, as a molecular phylogenetic tree seems not to be the final result of the phylogenetic reconstructions, but a valuable material for interpretations, the biological context of which should be understood using “phylogenetic thinking”.

Despite the fact that our knowledge of the phylogeny and taxonomy of lichenized fungi and algae is developing rapidly, there is still a mountain of open questions and challenges in this exciting field. Phylogenetic affinities and taxonomic placements of a large number of taxa are still awaiting clarification, and species complexes need to be resolved using the molecular techniques and the phylogenetic approach. Species-rich genera, cryptic species, taxa from biodiversity-rich areas, insufficiently resolved taxa of both mycobionts and photobionts, and the dating of evolutionary events are within the scope of interest of lichen taxonomists.

In this Special Issue, articles (original research papers, perspectives, hypotheses, opinions, reviews, and modeling approaches and methods) that focus on the phylogeny, trait evolution, and taxonomy of lichenized fungi, lichenicolous fungi, endolichenic fungi, algae, and cyanobacteria are most welcome.

Dr. Evgeny Davydov
Dr. Alexander G. Paukov
Dr. Giovanna Potenza
Guest Editors

Manuscript Submission Information

Manuscripts should be submitted online at www.mdpi.com by registering and logging in to this website. Once you are registered, click here to go to the submission form. Manuscripts can be submitted until the deadline. All submissions that pass pre-check are peer-reviewed. Accepted papers will be published continuously in the journal (as soon as accepted) and will be listed together on the special issue website. Research articles, review articles as well as short communications are invited. For planned papers, a title and short abstract (about 100 words) can be sent to the Editorial Office for announcement on this website.

Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Plants is an international peer-reviewed open access semimonthly journal published by MDPI.

Please visit the Instructions for Authors page before submitting a manuscript. The Article Processing Charge (APC) for publication in this open access journal is 2700 CHF (Swiss Francs). Submitted papers should be well formatted and use good English. Authors may use MDPI's English editing service prior to publication or during author revisions.

Keywords

  • lichens
  • lichenized genus
  • lichen-forming fungi
  • lichen algae
  • lichen photobionts
  • lichenicolous fungi
  • endolichenic fungi
  • taxonomy
  • systematics
  • phylogeny
  • evolution
  • photobionts
  • symbiotic
  • associations
  • ecological roles

Published Papers (2 papers)

Order results
Result details
Select all
Export citation of selected articles as:

Research

23 pages, 9623 KiB  
Article
Multilocus Molecular Phylogeny of the Umbilicaria aprina Group (Umbilicariaceae, Lichenized Ascomycota) Supports Species Level and Neo-Endemic Status of Umbilicaria krascheninnikovii
by Evgeny A. Davydov, Dmitry E. Himelbrant, Ekaterina S. Kuznetsova, Irina S. Stepanchikova and Lidia S. Yakovchenko
Plants 2024, 13(5), 729; https://doi.org/10.3390/plants13050729 - 4 Mar 2024
Viewed by 704
Abstract
The Northeast Asian endemic species of lichen-forming fungus Umbilicaria krascheninnikovii is herein discussed in the global context of biogeography and phylogeny of the U. aprina group. The name U. krascheninnikovii has been erroneously used by lichenologists for Umbilicaria spp. from high latitudes or [...] Read more.
The Northeast Asian endemic species of lichen-forming fungus Umbilicaria krascheninnikovii is herein discussed in the global context of biogeography and phylogeny of the U. aprina group. The name U. krascheninnikovii has been erroneously used by lichenologists for Umbilicaria spp. from high latitudes or altitudes worldwide, as there are omphalodisc apothecia and rough “crystals” of a necral layer on the upper surface. To test the monophyly and phylogenetic relationships within the U. aprina group, four independent DNA regions (nrITS/5.8S, RPB2, mtLSU, and mtSSU) were used for six rare species, including a dozen specimens of U. krascheninnikovii from its locus classicus in Kamchatka. The study is based on the phylograms obtained using maximum likelihood and a Bayesian phylogenetic inference framework. As a result of phylogenetic and biogeographic analyses, it was shown that U. krascheninnikovii is a neo-endemic of the areas of modern volcanism in Kamchatka, Japan, as well as in the Kurile Islands, where this species was recorded for the first time. The morphology of U. krascheninnikovii is herein described and illustrated. Increasing the role of the sexual process and reducing asexual thalloconidiogenesis are shown to be apomorphic traits in the U. aprina group. The combination of sexual and asexual reproduction provides adaptive advantages in changing environmental conditions. Full article
(This article belongs to the Special Issue Phylogeny and Taxonomy of Lichen Symbionts)
Show Figures

Figure 1

17 pages, 2173 KiB  
Article
Fungal–Algal Association Drives Lichens’ Mutualistic Symbiosis: A Case Study with Trebouxia-Related Lichens
by Ya-Bo Zuo, Da-Yong Han, Yan-Yan Wang, Qiu-Xia Yang, Qiang Ren, Xin-Zhan Liu and Xin-Li Wei
Plants 2023, 12(17), 3172; https://doi.org/10.3390/plants12173172 - 4 Sep 2023
Viewed by 1539
Abstract
Biotic and abiotic factors influence the formation of fungal–algal pairings in lichen symbiosis. However, the specific determinants of these associations, particularly when distantly related fungi are involved, remain poorly understood. In this study, we investigated the impact of different drivers on the association [...] Read more.
Biotic and abiotic factors influence the formation of fungal–algal pairings in lichen symbiosis. However, the specific determinants of these associations, particularly when distantly related fungi are involved, remain poorly understood. In this study, we investigated the impact of different drivers on the association patterns between taxonomically diverse lichenized fungi and their trebouxioid symbiotic partners. We collected 200 samples from four biomes and identified 41 species of lichenized fungi, associating them with 16 species of trebouxioid green algae, of which 62% were previously unreported. The species identity of both the fungal and algal partners had the most significant effect on the outcome of the symbiosis, compared to abiotic factors like climatic variables and geographic distance. Some obviously specific associations were observed in the temperate zone; however, the nestedness value was lower in arid regions than in cold, polar, and temperate regions according to interaction network analysis. Cophylogenetic analyses revealed congruent phylogenies between trebouxioid algae and associated fungi, indicating a tendency to reject random associations. The main evolutionary mechanisms contributing to the observed phylogenetic patterns were “loss” and “failure to diverge” of the algal partners. This study broadens our knowledge of fungal–algal symbiotic patterns in view of Trebouxia-associated fungi. Full article
(This article belongs to the Special Issue Phylogeny and Taxonomy of Lichen Symbionts)
Show Figures

Figure 1

Back to TopTop