Telomere and Subtelomeric Chromatin Structure and Organization in Yeasts and Filamentous Fungi

A special issue of Microorganisms (ISSN 2076-2607). This special issue belongs to the section "Molecular Microbiology and Immunology".

Deadline for manuscript submissions: closed (31 May 2021) | Viewed by 6303

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School of Medicine, Tulane University, New Orleans, LA, USA
Interests: telomeres; chromatin; recombination
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Dear Colleagues,

The ends of eukaryotic chromosomes, or telomeres, are essential for chromosomal replication and protection against DNA damage and genome instability. The loss of the telomeric sequence leads to senescence and cell death through multiple rounds of replication. This loss is compensated by the ribonucleoprotein telomerase that uses its RNA component as a template for the addition of guanine and thymine-rich (G+T-rich) DNA sequences of telomeres. This G+T-rich DNA is packaged with specific proteins that maintain the telomere and confers its protective properties against genome instability. In yeast, the telomere chromatin structure is unique from the nucleosomal packaging in the genome. As a protein complex, the stability of the chromatin is dependent on the affinities of proteins for binding to one another and binding to telomeric DNA. Defects in components of this structure are manifested in differing lengths of the telomeric DNA and the stability of the telosome as assayed in vitro. How the structural components of telomere chromatin are integrated into a packaged unit is poorly understood.

Subtelomeric regions in yeast and fungi are often, but not exclusively, heterochromatic areas that are often responsible for telomere-initiation epigenetic silencing of gene activity (telomere position effect). Although the organization of subtelomeric regions is well understood in Saccharomyces cerevisiae, the organization and nucleosome structure appear to differ among different classes of fungi.

The aim of this Special Issue of Microorganisms is to present a collection of articles that reflect the current state of our understanding of fungal telomere chromatin structure and subtelomeric organization and structure.  Manuscripts covering all aspects of research relating to this topic are welcome, from different fungal systems (both reviews are original research) are encouraged.

Prof. Arthur J. Lustig
Guest Editor

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Keywords

  • Telomeres
  • subtelomeres
  • heterochromatin
  • yeasts
  • fungi
  • chromatin

Published Papers (2 papers)

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Review

16 pages, 1761 KiB  
Review
Subtelomeric Chromatin in the Fission Yeast S. pombe
by Rajesh K. Yadav, Atsushi Matsuda, Brandon R. Lowe, Yasushi Hiraoka and Janet F. Partridge
Microorganisms 2021, 9(9), 1977; https://doi.org/10.3390/microorganisms9091977 - 17 Sep 2021
Cited by 3 | Viewed by 3186
Abstract
Telomeres play important roles in safeguarding the genome. The specialized repressive chromatin that assembles at telomeres and subtelomeric domains is key to this protective role. However, in many organisms, the repetitive nature of telomeric and subtelomeric sequences has hindered research efforts. The fission [...] Read more.
Telomeres play important roles in safeguarding the genome. The specialized repressive chromatin that assembles at telomeres and subtelomeric domains is key to this protective role. However, in many organisms, the repetitive nature of telomeric and subtelomeric sequences has hindered research efforts. The fission yeast S. pombe has provided an important model system for dissection of chromatin biology due to the relative ease of genetic manipulation and strong conservation of important regulatory proteins with higher eukaryotes. Telomeres and the telomere-binding shelterin complex are highly conserved with mammals, as is the assembly of constitutive heterochromatin at subtelomeres. In this review, we seek to summarize recent work detailing the assembly of distinct chromatin structures within subtelomeric domains in fission yeast. These include the heterochromatic SH subtelomeric domains, the telomere-associated sequences (TAS), and ST chromatin domains that assemble highly condensed chromatin clusters called knobs. Specifically, we review new insights into the sequence of subtelomeric domains, the distinct types of chromatin that assemble on these sequences and how histone H3 K36 modifications influence these chromatin structures. We address the interplay between the subdomains of chromatin structure and how subtelomeric chromatin is influenced by both the telomere-bound shelterin complexes and by euchromatic chromatin regulators internal to the subtelomeric domain. Finally, we demonstrate that telomere clustering, which is mediated via the condensed ST chromatin knob domains, does not depend on knob assembly within these domains but on Set2, which mediates H3K36 methylation. Full article
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19 pages, 873 KiB  
Review
Telomeric and Sub-Telomeric Structure and Implications in Fungal Opportunistic Pathogens
by Raffaella Diotti, Michelle Esposito and Chang Hui Shen
Microorganisms 2021, 9(7), 1405; https://doi.org/10.3390/microorganisms9071405 - 29 Jun 2021
Cited by 5 | Viewed by 2583
Abstract
Telomeres are long non-coding regions found at the ends of eukaryotic linear chromosomes. Although they have traditionally been associated with the protection of linear DNA ends to avoid gene losses during each round of DNA replication, recent studies have demonstrated that the role [...] Read more.
Telomeres are long non-coding regions found at the ends of eukaryotic linear chromosomes. Although they have traditionally been associated with the protection of linear DNA ends to avoid gene losses during each round of DNA replication, recent studies have demonstrated that the role of these sequences and their adjacent regions go beyond just protecting chromosomal ends. Regions nearby to telomeric sequences have now been identified as having increased variability in the form of duplications and rearrangements that result in new functional abilities and biodiversity. Furthermore, unique fungal telomeric and chromatin structures have now extended clinical capabilities and understanding of pathogenicity levels. In this review, telomere structure, as well as functional implications, will be examined in opportunistic fungal pathogens, including Aspergillus fumigatus, Candida albicans, Candida glabrata, and Pneumocystis jirovecii. Full article
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