Ecologies, Volume 5, Issue 2 (June 2024) – 6 articles

Studying the soils in the periodical flood zone of three reservoirs is of promising importance for their subsequent return to economic activities. Research on the bacterial and archaeal communities of soils that are periodically or continuously flooded by reservoirs is still insufficient. To evaluate the chemical status of soils and their microbiota, the study was conducted in the Yumaguzino, Nugush, and Slak reservoir sites in the South Ural area (Russian Federation). The bacterial and archaeal communities of periodically flooded and non-flooded soils were investigated after a comparative investigation of chemical, hydrological, and climatic factors. It was discovered that flooded soils had anoxic conditions during the whole of the year, with brief drying intervals of limited length and low levels of effective temperatures. In terms of chemistry, flooded soils are distinguished by increased acidity, a fall in organic matter, and an increase in alkali-hydrolysable nitrogen. Compared to their counterparts in non-flooded soils, bacterial and archaeal communities in flooded soils are significantly different. Generally speaking, the biodiversity of flooded soils rises with the duration and depth of floods. Significant variations at the phylum level are mostly caused by a decline in the relative presence of Thaumarchaeota and an increase in Proteobacteria and Chloroflexi representation. It was discovered that the Euryarchaeota phylum was either absent or had a significantly decreased relative prevalence at the sites of intermittently flooding soils. Full article

Globally, work is being undertaken to preserve biodiversity and prevent further species extinctions. Yet, without adequate data about the presence of species within ecosystems, hidden extinctions can occur without our knowledge. Given that poleward range retractions are projected for bull kelp (Durvillaea amatheiae) in southeastern Australia, there is the potential for hidden extinctions to occur in associated macrofaunal species. However, this risk cannot be assessed due to the limited data on the invertebrate macrofauna associated with D. amatheiae. We documented macrofauna within D. amatheiae holdfasts, with the objective of establishing a first analysis of the holdfast fauna for this kelp and identifying, where possible, any host-specific taxa. Holdfasts were collected at six locations, spanning most of the range of D. amatheiae on the southeastern Australian mainland. Macrofauna were removed from holdfasts and identified to the lowest possible taxonomic level. Modelling was applied to determine factors correlated with patterns of assemblages among locations. Holdfast assemblages were found to vary significantly among locations and exhibited a latitudinal gradient in assemblage structure. The northernmost location (Aragunnu), which has the highest risk of D. amatheiae range retractions, was found to have distinct species assemblages and generally higher diversity and abundance than locations further south. However, no host-specific taxa were identified in samples, indicating that there is a low risk of multiple hidden species extinctions occurring in holdfast macrofauna, due to future range retractions of D. amatheiae. Rather, most of the macrofauna taxa in D. amatheiae holdfasts were found to also occur in association with the sympatric golden kelp Ecklonia radiata, which is not expected to undergo range retractions at the latitudes where losses of D. amatheiae are projected. Overall, there is an urgent need to develop strategies to combat projected future range retractions of D. amatheiae to reduce impacts on the species that rely on D. amatheiae for habitat. Full article

The primacy of endozoochory for the maintenance and expansion of many woody plant populations is well known, but seed dispersal is not well understood for most species. This is especially true for rare species, where small population size and low fruit production can limit field- or observation-based experiments. Additionally, the effect of environmental heterogeneity on disperser movement is rarely investigated but has been shown to improve estimates of plant population spatial patterns and dynamics. We used simulation experiments to explore the effects of environmental heterogeneity and disperser movement on Lindera subcoriacea seed dispersal, a rare shrub from the southeastern United States with avian-dispersed seeds. Our experiments incorporated environmental heterogeneity and simulated disperser movement for five bird species, based on either landscape permeability or straight path rules. We anticipated that permeability-based movement would result in greater dispersal distances and seed dispersal effectiveness, which characterizes both quantity and quality. Generally, we did not find differences in seed dispersal between permeability and straight path experiments. However, we did find that permeability-based experiments had greater deposition into suitable habitat during flight (23 vs. 1%). These rare but longer distance depositions may be especially important for plants that are influenced by gap or interpopulation dynamics. We also found consistently greater dispersal into high quality habitats regardless of disperser species in permeability experiments, implying that incorporating species-specific assessments of landscape utilization (occupancy) could influence the effectiveness of seed dispersal. Our study suggests that including environmental heterogeneity in seed dispersal models can provide additional insights not provided by avian parameters (e.g., gut capacity, seed retention time, and flight speed) commonly used to inform dispersal models. Full article

River contamination by microorganisms, or another chemical source, poses a serious threat to both the environment and public health. Taking immediate and appropriate actions is essential to mitigate the contamination and prevent further spread. As such, regular monitoring of these pollution agents is essential to act in time and control its minor extension. However, there is a lack of commitment to this emergent concern and respective actions around the world. This work aims to study the contamination of a Portuguese river (Tinto River) within Porto city (a highly populated urban area) regarding the total aerobic microorganisms, coliforms, and Enterococcus (as colony-forming units (CFUs) using specific solid culture media) and total organic matter (TOC). Different locations were considered along the Tinto River course (i.e., 14 locations within 11 km) and samples were collected on distinct days throughout September 2022. The overall results showed microbial contamination of aerobic microorganisms (up to 2 × 10⁵ CFU/100 mL), total coliforms (up to 7 × 10⁴ CFU/100 mL), Escherichia coli (up to 9 × 10³ CFU/100 mL), and Enterococcus (up to 8 × 10³ CFU/100 mL). The results also surpassed the maximum recommended values (MRVs) described in Portuguese decree-law no. 236/98 for irrigation waters. Moreover, TOC was found in a range of 4.54 mg/L to 57.2 mg/L. This work highlights the dangerous microbial contamination and higher amount of organic matter than would be expected for a surface water resource. Full article

Inshore and offshore bottlenose dolphin, Tursiops truncatus, ecotypes were distinguished through genetics, distribution, diet, morphology, diversity, and social behaviors. Although T. truncatus is a widely studied species, few studies have focused on offshore populations. Offshore biodiversity is frequently neglected due to the difficulty of data collection, and therefore, it is challenging to assess how threatened these populations are. A small, offshore population of dolphins residing around the Saint Peter Saint Paul Archipelago (SPSPA) in the middle of the Atlantic Ocean has been monitored for several years, and a decrease in the number of dolphin sightings has recently been noticed. We analyzed a comprehensive mtDNA control-region sequence dataset for this species to infer the conservation status and better understand the relationships between the SPSPA population and other offshore populations. We assessed the genetic diversity and population structure of the bottlenose dolphin from inshore and offshore populations of the Atlantic Ocean. Offshore populations are more genetically diverse and have less variation between populations than inshore populations. The offshore populations share haplotypes, indicating potential gene flow. However, the SPSPA population presented the lowest levels of genetic diversity between populations. The conservation status of the SPSPA population is concerning, and it is necessary to apply effective management strategies to guarantee its protection. Full article

Globally, suitable freshwater habitats are undergoing alterations and fish population declines, primarily attributed to the swift changes in climate and land use. Developing an effective conservation policy for freshwater fish necessitates careful consideration of the impacts of climatic and spatial factors. This study focuses on the analysis of 64 threatened freshwater fish in Bangladesh to anticipate their current and future climatically suitable habitats, utilizing the bioclim() species distribution model. Additionally, this study examines existing inland hydrographic networks and their corresponding harvest rates. The findings indicate that approximately 75% of the area of occupancy for the studied species is currently climatically suitable, but this is expected to decrease to 13% under future climate scenarios. Notably, 27 threatened species are at risk of lacking climatically suitable habitats in the future within their current area of occupancy. The three components of hydrographic networks—floodplains, rivers, and natural lakes—play varying roles in providing a climatically suitable habitat for the studied species. For instance, only 34% of threatened fish species are projected to find a suitable habitat over flood areas, 23% over rivers, and 16% over lakes. Existing protected areas presently offer limited protection (21% suitable area), expected to decline to 6% in the future, with no dedicated protected areas for freshwater fish. Floodplains are highlighted for providing habitat connectivity and facilitating brood fish dispersal. However, the unregulated and unmonitored annual harvest of freshwater fish from floodwater and rivers poses a potential silent cause for rapid population decline. Prioritizing the management of hydrographic components to maintain habitat connectivity, legal protection for threatened fish species, and establishing permanent protected areas for fish are crucial aspects in developing a conservation policy to mitigate the impact of future climate scenarios on threatened freshwater species. Full article