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Peer-Review Record

Characterization and Homology Modeling of Catalytically Active Recombinant PhaCAp Protein from Arthrospira platensis

Biology 2023, 12(5), 751; https://doi.org/10.3390/biology12050751
by Chanchanok Duangsri 1, Tiina A. Salminen 2, Marion Alix 2, Sarawan Kaewmongkol 1, Nattaphong Akrimajirachoote 3, Wanthanee Khetkorn 4, Sathaporn Jittapalapong 1, Pirkko Mäenpää 5, Aran Incharoensakdi 6,7 and Wuttinun Raksajit 1,*
Reviewer 1: Anonymous
Reviewer 2:
Biology 2023, 12(5), 751; https://doi.org/10.3390/biology12050751
Submission received: 3 April 2023 / Revised: 30 April 2023 / Accepted: 17 May 2023 / Published: 20 May 2023

Round 1

Reviewer 1 Report

The authors gave a very detailed and thorough story about the enzymatic activity of PHaCap. The experimental and discussion is very solid. However, I'd like to make the following suggestions:

1. It is helpful to add a figure for the introduction, especially drawing the biosynthesis pathway of Polyhydroxybutyrate.

2. The Kcat and Km were measured using CoA release. This may be due to 3HB-CoA hydrolysis. It is better to show the direct production of Polyhydroxybutyrate.

Author Response

Please see the attachment

Author Response File: Author Response.pdf

Reviewer 2 Report

In this study, Class III PHA synthase (PhaCAp) from the cyanobacterium Arthrospira platensis was characterized. The Vmax, Km, and kcat values for R-3-hydroxybutyryl coenzyme A (3HB-CoA) of the purified rPhaCAp were 4.5±2 32 umol/min/mg, 31.3±2 μM, and 412.7±2 1/s, respectively. Size exclusion chromatography revealed that rPhaCAp exists as an active dimer. The overall fold was predicted using the 3D structural model for rPhaCAp. This paper covers all the analyzes for PhaC in general and provides useful information as a new PhaC.

 

This PHA synthase seems to show sufficient polymerization activity without the need for a PhaE subunit. Why was it classified as Class III?

The size of the PhaCAp subunit is described as 69 kDa, it is the typical size of a Class I PhaC.

 

Size exclusion chromatography revealed that rPhaCAp exists as an active dimer but still presents monomer PhaC as shown in Fig. 3B. Does the monomer PhaC have polymerization activity? Did you exclude the monomer PhaC when calculating kcat value?

Author Response

Please see the attachment

Author Response File: Author Response.pdf

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