Next Article in Journal
SERS Determination of Oxidative Stress Markers in Saliva Using Substrates with Silver Nanoparticle-Decorated Silicon Nanowires
Next Article in Special Issue
Electrochemical Characterization Using Biosensors with the Coagulant Moringa oleifera Seed Lectin (cMoL)
Previous Article in Journal
Multi-Parameter Detection of Urine Based on Electropolymerized PANI: PSS/AuNPs/SPCE
Previous Article in Special Issue
Recent Advances in Electrochemical Biosensors for Monitoring Animal Cell Function and Viability
 
 
Font Type:
Arial Georgia Verdana
Font Size:
Aa Aa Aa
Line Spacing:
Column Width:
Background:
Article

Applicability of a Green Nanocomposite Consisted of Spongin Decorated Cu2WO4(OH)2 and AgNPs as a High-Performance Aptasensing Platform in Staphylococcus aureus Detection

by
Faezeh Shahdost-Fard
1,
Shahin Faridfar
2,
Amir Homayoun Keihan
3,
Mohammad Aghaei
4,
Iaroslav Petrenko
5,
Farhad Ahmadi
6,7,*,
Hermann Ehrlich
5,8,* and
Mehdi Rahimi-Nasrabadi
5,9,*
1
Department of Chemistry, Faculty of Basic Sciences, Farhangian University, Tehran 19396-14464, Iran
2
Department of Chemistry, Faculty of Science, University of Imam Hossein, Tehran 15816-18711, Iran
3
Molecular Biology Research Center, Systems Biology and Poisonings Institute, Baqiyatallah University of Medical Sciences, Tehran 19516-83759, Iran
4
Department of Chemical Engineering, School of Chemical and Petroleum Engineering, Shiraz University, Shiraz 84334-71964, Iran
5
Institute of Electronic and Sensor Materials, TU Bergakademie Freiberg, 09599 Freiberg, Germany
6
Physiology Research Center, Iran University of Medical Sciences, Tehran 14496-14535, Iran
7
Razi Drug Research Center, Iran University of Medical Sciences, Tehran 14496-14535, Iran
8
Center for Advanced Technology, Adam Mickiewicz University, 61-614 Poznan, Poland
9
Center of Excellence in Electrochemistry, School of Chemistry, College of Science, University of Tehran, Tehran 14179-35840, Iran
*
Authors to whom correspondence should be addressed.
Biosensors 2023, 13(2), 271; https://doi.org/10.3390/bios13020271
Submission received: 21 December 2022 / Revised: 6 February 2023 / Accepted: 9 February 2023 / Published: 14 February 2023
(This article belongs to the Special Issue Electrochemical (Bio-) Sensors in Biological Applications)

Abstract

:
This study reports the synthesis of a nanocomposite consisting of spongin and its applicability in the development of an aptasensing platform with high performance. The spongin was carefully extracted from a marine sponge and decorated with copper tungsten oxide hydroxide. The resulting spongin-copper tungsten oxide hydroxide was functionalized by silver nanoparticles and utilized in electrochemical aptasensor fabrication. The nanocomposite covered on a glassy carbon electrode surface amplified the electron transfer and increased active electrochemical sites. The aptasensor was fabricated by loading of thiolated aptamer on the embedded surface via thiol-AgNPs linkage. The applicability of the aptasensor was tested in detecting the Staphylococcus aureus bacterium as one of the five most common causes of nosocomial infectious diseases. The aptasensor measured S. aureus under a linear concentration range of 10–108 colony-forming units per milliliter and a limit of quantification and detection of 12 and 1 colony-forming unit per milliliter, respectively. The highly selective diagnosis of S. aureus in the presence of some common bacterial strains was satisfactorily evaluated. The acceptable results of the human serum analysis as the real sample may be promising in the bacteria tracking in clinical samples underlying the green chemistry principle.

1. Introduction

Sponges are the oldest multicellular organisms in marine and freshwater habitats. Marine spongin is held in a dense network of collagen-like microfibers [1,2,3,4]. This proteinaceous biomaterial has offered many outstanding physicochemical properties in various eco-friend and cost-effective applications [5,6,7,8]. Soft spongins have been initially considered for helmet padding, portable drinking utensils, and municipal water filters [9,10]. With the advancement of technology, their application has been extended. Their combination with carbon-based nanostructures has been drawing focused attention to various fields of applications, such as supercapacitors [11], tissue engineering [12], microbial fuel cells [13], and sensors [14,15,16]. This lightweight, flexible, conductive, and renewable source presents excellent porosity with high internal surface area [16,17], such that its metallization provides rich electrochemical active sites with catalytic properties [18]. Despite the beneficial advantages of spongin, its application in the aptasensor design has rarely been reported. Liu’s group has only reported a nanocomposite based on AuNPs/graphene sponge in the electrochemical aptasensor fabrication to measure homocysteine [19].
Different metal forms, e.g., copper (Cu) and tungsten (W), have been used as a modifier in the sensor generation and boosted various electrochemical properties [20]. It seems that utilizing copper tungsten oxide hydroxide (Cu2WO4(OH)2) and spongin as the beneficial low-cost modifier reduces the costs of the aptasensor fabrication process. Since the attachment of the Apt (aptamer) sequence on the surface needs a linker, the green silver nanoparticles (AgNPs) was candidate [21]. So, a novel and green nanocomposite consisting of spongin, Cu2WO4(OH)2, and AgNPs, denoted as spongin-Cu2WO4(OH)2@AgNPs, was synthesized. Utilizing this biocompatible biomaterial in the aptasensor design may be promised some unparalleled electrochemical properties, namely (1) ensuring the fast electron transfer arising from the conductive network structure of spongin, (2) facilitating the mass transfer among the formed channels with the inherent porous structures, (3) creating rich building blocks because of the embedded available surface areas for more loading Apt sequences, and (4) guaranteed attachment of Apt sequence on the nanocomposite surface by a chemisorption linkage between the thiol group of Apt and AgNPs. In this study, the applicability of the synthesized nanocomposite has been evaluated in the aptasensor fabrication for measuring Staphylococcus aureus (S. aureus) as a target model.
Due to bacterial pathogenicity in humans, bacteria tracking is highly crucial for community health protection. S. aureus, an opportunistic pathogenic bacterium, irreparably threatens human health by causing endocarditis, toxemias of the gastrointestinal and reproductive tracts, pneumonia, and causing some invasive infections [21,22]. Since bacterial infections pose a severe threat to health systems and challenge global sustainability, developing an efficient method for pathogen footprint diagnosis in the body is constantly demanded in medical studies. Up to now, several traditional protocols have been introduced for S. aureus tracking based on bacterial culture and plate counting of the colony [23], polymerase chain reaction (PCR) [24,25], enzyme-linked immunosensor assay (ELISA) [26,27] and biochemical and metabolic tests [28]. Despite their accuracy, most of them make implementation challenging in clinical monitoring due to low sensitivity, interference with other similar bacterium, labor requirements, and time-consuming (3–5 days). So, the development of aptasensing methodology can be promising for the effective diagnosis of S. aureus because of the excellent affinity and selectivity of the Apt toward the target in less time. Although several S. aureus aptasensors have been reported based on various expensive nanostructures [29,30,31], utilizing the conductive and robust spongin-Cu2WO4(OH)2@AgNPs nanocomposite in the aptasensor design is a novel and low-cost sensing interface based on green chemistry principles. To the best of the authors’ knowledge, the nanocomposite synthesis based on green chemistry and its application in aptasensor construction has not been reported up to now.
Herein, the successful formation of the developed nanocomposite has been fully confirmed by various characterization techniques, including field emission scanning electron microscopy (FESEM), energy dispersive X-ray (EDX), X-ray diffraction (XRD), UV-vis, and Fourier-transform infrared (FTIR) spectroscopies. The aptasensor for the electrochemical trapping of S. aureus has been fabricated by the nanocomposite covering on a glassy carbon electrode (GCE) surface and providing a large surface area with rich AgNPs groups to load profitably Apt bioreceptors via self-assembled monolayer (SAM) linking. The S. aureus has been selectively measured by its incubating on the aptasensor surface and further inhibiting the electrochemical signal of the ferro/ferricyanide [Fe(CN)6]3−/4− as the redox probe.

2. Experimental

2.1. Chemical and Reagents

S. aureus, Salmonella (Salmon), Escherichia coli (E. coli), and Shigella flexneri (S. flexneri) bacteria were obtained from Pasteur Institute (Tehran, Iran, https://www.pasteur.ac.ir (accessed on 8 February 2023)). A thiolated-Apt specific to S. aureus with a sequence of 5′-SH-TCG GCA CGT CAG TAG CGC TCG CTG GTC ATC CCA CAG CTA CGT C-3′ [32] was synthesized by Bioneer Company (Daejeon, South Korea, https://www.bioneer.com (accessed on 8 February 2023)). Ammonia (NH3), copper (II) sulfate (CuSO4), silver nitrate (AgNO3), ethanol, sodium hydroxide (NaOH), hydrochloride acid (HCl), potassium chloride (KCl), and sodium tungstate (Na2WO4) were ordered from Emertat Chemistry Company (Tehran, Iran, http://www.ameretatco.com (accessed on 8 February 2023)). A total of 0.1 M sterile phosphate buffer solution (PBS) with a pH of 7.4 was used for washing the enriched bacteria. For evaluating and confirming the attachment of each layer utilizing a probe sensitive to the surface state is necessary. The ferro/ferricyanide [Fe(CN)6]3−/4−, as an available and low-cost redox marker that probes the electrode surface in each step, was selected. A total of 0.1 M PBS containing 0.1 M KCl and 1 Mm [Fe(CN)6]3−/4− as the redox marker was utilized for all the electrochemical studies. A fresh and healthy serum sample from a 31-year-old man was randomly obtained from a local clinical lab by observing ethical principles.

2.2. Instrumentation

Morphology characterization of nanostructures was studied by the FESEM images and EDX spectrum obtained from TESCAN (Kohoutovice, Czech Republic, https://www.tescan.com (accessed on 8 February 2023)). XRD with a Cu Kα radiation source was used to investigate the crystal structure of the component of the nanocomposite. An incubator was used for bacteria cultivation. A UV-vis spectrophotometer (Lambda 25, PerkinElmer, MA, USA, https://www.perkinelmer.com (accessed on 8 February 2023)) was applied for the investigation of optical density (OD) using a glass cell (1 cm) through the estimation of the cultured bacteria. FTIR spectrum was recorded by the Bruker, VERTEX 70 (Heidelberg, Germany, https://www.bruker.com (accessed on 8 February 2023)). A pH adjustment of solutions was carried out with a digital pH/mV/ion meter (Metrohm, 780 model, Herisau, Switzerland, https://www.metrohm.com/en (accessed on 8 February 2023)).
All the electrochemical experiments were performed by the potentiostat/galvanostat analyzer, including µ-Autolab III (with nova software 2.2) and FRA. A conventional three-electrode system containing a GCE with a diameter of 2 mm (Azar electrode, Urmia, Iran), Pt wire counter electrode, and Ag/AgCl (saturated KCl) reference electrode was used. The differential pulse voltammetry (DPV) technique was carried out at a pulse amplitude of 50 mV, a modulation time of 70 ms, with a scan rate of 50 mV s 1 . The electrochemical impedance spectroscopy (EIS) study was performed under a frequency range of 5 Hz–100 kHz at 0.25 V (vs. Ag/AgCl reference electrode) as a formal potential of the redox marker. Based on the result of the EIS investigation, a Randles circuit was modeled by some main components containing a constant phase element (CPE), solution ohmic resistance (Rs), Warburg impedance (W), and charge transfer resistance (Rct).

2.3. Preparation of the Spongin

The 3D scaffold of the spongin was separated from the marine spongin and carefully washed with deionized (DI) water to remove some stone and shell parts. Next, this was immersed in 3 M HCl (two days) for pollution, eliminated and washed with DI water, and finally dried [7].

2.4. Spongin-Cu2WO4(OH)2@AgNPs Nanocomposite Synthesize

A total of 100 mg of the obtained spongin scaffold was stirred in 0.22 M Cu(NO3)2 for 24 h. Then, an aqueous solution of 15 mL Na2WO4 (0.22 M) was slightly added to it under sonication for 15 min. Next, the solution was heated at 120 °C in a stainless-steel autoclave (48 h). After washing and drying the heated mixture, 500 mg of the resulting brown powder containing the spongin-Cu2WO4(OH)2 was dispersed in 20 mL DI water, and 32 mg AgNO3 was added to them under stirring for 30 min. Then, 20 mL NaBH4 (13.2 mM) was droply added to them for 30 min. The resulting spongin-Cu2WO4(OH)2@AgNPs nanocomposite was sonicated and used for further experiments.

2.5. Cultivation of Bacterial Strains

S. aureus, Salmon, E. coli, and S. flexneri were separately cultivated in a Luria Bertani (LB) broth culture media under shaking (170 rpm, 37 °C) in an incubator (12 h). OD values of the cultured bacteria were measured by a UV-vis spectrophotometer at 600 nm. All the enriched bacteria were separately centrifuged at 6000 rpm for 20 min (25 °C), and the resulting precipitates were washed with sterile PBS (0.1 M, pH = 7.4) three times. The concentration of the bacteria was evaluated by the McFarland Turbidity Standard protocol based on a colony-forming unit per milliliter (CFU) [33]. The cultured bacteria solution was diluted by PBS under sterile conditions for further experiments.

2.6. Preparation of Real Samples

The human serum sample was mixed with 2% (v/v) ethanol and centrifuged at 5000 rpm (10 min). Then, a clear supernatant layer of the sample was diluted (10%) with 0.1 M PBS (pH = 7.4). A series of different S. aureus concentrations (from 1.5 × 103 to 1.5 × 107 CFU mL 1 ) were spiked to the pretreated sample to test the developed aptasensor.

2.7. Aptasensor Construction and Sensing Principle

A GCE surface was polished on an emery paper impregnated with alumina powder (0.05 µm) to create a mirror-like surface. Then, the GCE was briefly sonicated in a DI water/ethanol mixture to eliminate some possible absorbed particles. A total of 5 µL of the synthesized nanocomposite was drop-casted on the clean GCE surface and dried at room temperature to provide the spongin-Cu2WO4(OH)2@AgNPs/GCE. Next, 10 µL Apt was incubated on the spongin-Cu2WO4(OH)2@AgNPs/GCE surface overnight (4 °C) to attach to the nanocomposite’s AgNPs through SAM linkage. The resulting Apt/spongin-Cu2WO4(OH)2@AgNPs/GCE as the aptasensor was washed by PBS to remove some unbound particles. The signals of the aptasensor incubated by different concentrations of S. aureus were recorded underlying [Fe(CN)6]3−/4− as the redox marker by the DPV technique (Scheme 1).

3. Results and Discussions

3.1. Characterization of the Spongin-Cu2WO4(OH)2@AgNPs Nanocomposite

The different synthesis stages of the nanocomposite were investigated by the XRD technique. While the XRD pattern of the spongin in Figure 1a indicates a single broad peak at 2θ of 22° corroborating the carbon-based structure of the spongin, some sharp peaks marked by the blue circle confirm the presence of Cu2WO4(OH)2 in Figure 1b. The Ag pattern with the pink circle in Figure 1c proves a successful synthesis of the nanocomposite functionalized by AgNPs. Moreover, the absence of some common additional peaks in XRD patterns confirms the high purity of the synthesized crystalline nanocomposite. According to the Scherrer equation (Equation (1)), an average dimension (τ) of the spongin-Cu2WO4(OH)2 and spongin-Cu2WO4(OH)2@AgNPs in the nanocomposite were calculated to be 42 nm and 50 nm, respectively, where dimensionless shape factor (K), X-ray wavelength (λ), β as corrected full width at half-maximum after eliminating instrumental line broadening, and Bragg angle were identified.
τ = k λ β c o s θ
FESEM images of the nanocomposite with two different magnifications were further recorded to identify the nanostructure (Figure 1d,f). Figure 1d exhibits a fiber network corresponding to the 3D scaffold of the spongin [34]. The morphology changes of the fiber network and the presence of some particles with different shapes and sizes in Figure 1e,f are attributed to covering Cu2WO4(OH)2 and Cu2WO4(OH)2@AgNPs on the scaffold surface, respectively. These images reveal that Cu2WO4(OH)2 and AgNPs are firmly attached to the spongin fibers, so they have not peeled off from the surface even during the ultrasonic washing process. FTIR spectrum of Cu2WO4(OH)2@AgNPs is shown in Figure 2a. The bands near 419 cm−1 and 619 cm−1 may be related to the Cu-O stretching vibration, and the peak located at 1116 cm−1 can be assigned to the presence of W-OH bonds [35]. The absorbance bands at 1384 cm−1 and 1635 cm−1 can be assigned to the C=O and C-O vibration modes in the carbon-based structure of the spongin, respectively. The broad band at 3420 cm−1 may correspond to the OH-stretching vibration modes of free and hydrogen-bonded hydroxyl groups [36]. The EDX spectrum in Figure 2b confirms the presence of all the elements of the synthesized spongin-Cu2WO4(OH)2@AgNPs.

3.2. Electrochemical Characterization of Aptasensor

The GCE modification process was investigated step by step with the recording of the corresponding cyclic voltammograms (CVs) of GCE in 0.1 M PBS containing 0.1 M KCl and 1 mM [Fe(CN)6]3−/4− as the redox marker at a scan rate of 50 mV s 1 (Figure 3a). As shown in Figure 3a, the CV of the spongin-Cu2WO4(OH)2/GCE exhibits a higher current signal with a lower peak-to-peak potential separation (ΔE = 145 mV) compared to the bare GCE (ΔE = 165 mV). This desired electrochemical behavior reveals the efficient ability of the spongin-Cu2WO4(OH)2 in activating the GCE sites and amplifying the electron transfer. The higher current signal and lower ΔE value (142 mV) of spongin-Cu2WO4(OH)2@AgNPs/GCE than the spongin-Cu2WO4(OH)2/GCE is attributed to the AgNPs presence in the nanocomposite. The AgNPs not only increase the surface conductivity and enhance the current signal than spongin-Cu2WO4(OH)2/GCE and bare GCE but also act as a linker for the thiolated-Apt attachment on the nanocomposite via chemisorption linkage. The current signal decrease and ΔE value increase (388 mV) in the Apt/spongin-Cu2WO4(OH)2@AgNPs/GCE layer is assigned to the repelling of the negatively charged Apt attached to the AgNPs and the anion [Fe(CN)6]3−/4− probe. This behavior confirms the attachment of thiolated-Apt to the AgNPs on the nanocomposite surface. The S. aureus/Apt complex formation on the surface is confirmed by further electron transfer decrease and the ΔE value increase (416 mV) stemming from the S. aureus attachment on the Apt’s arm and more space barrier created on the surface.
The electron transfers kinetic study of the aptasensor’s different layers by the EIS technique and corresponding Nyquist plots in Figure 3b exhibits a large semicircle with a charge transfer resistance (Rct) value of 1.089 kΩ and 0.289 kΩ for the bare GCE and spongin-Cu2WO4(OH)2/GCE, respectively. This behavior can be attributed to the high surface area and porosity of the spongin-Cu2WO4(OH)2 than the GCE to improve electron transfer and mass transfer on the surface. A low Rct value (0.03 kΩ) with a straight line for the spongin-Cu2WO4(OH)2@AgNPs/GCE layer proves the AgNPs presence in the nanocomposite. A remarkable increase in the Rct value (1.692 kΩ) for the Apt/spongin-Cu2WO4(OH)2@AgNPs/GCE is attributed to the immobilization of the negatively charged Apt on the GCE surface via AgNPs linker. More increase in Rct value to 2.018 kΩ is assigned to S. aureus capturing by the Apt and suitable performance of the aptasensor in the target tracking. The CV and EIS results certify the successful immobilization of all layers in the aptasensor fabrication process.
To evaluate the performance of the embedded nanocomposite in the surface area increasing, the electroactive surface area (A) values of GCE, spongin-Cu2WO4(OH)2/GCE, and spongin-Cu2WO4(OH)2@AgNPs/GCE surfaces were investigated by using the famous Randles–Sevcik Equation (2) [37]:
Ip = (2.69 × 105) n3/2 A D1/2 C ν1/2
where D is the diffusion coefficient of K3[Fe(CN)6] (7.6 × 10 6 cm2  s 1 ) and all symbols have a normal meaning. Accordingly, the A values of the GCE, spongin-Cu2WO4(OH)2/GCE, and spongin-Cu2WO4(OH)2@AgNPs/GCE surfaces were calculated to be 0.03, 0.06, and 0.08 cm2, respectively. The estimated A value of 2.67-fold for the spongin-Cu2WO4(OH)2@AgNPs/GCE surface confirms the unique properties of the proposed nanocomposite in supplying higher surface area and amplifying the current signal.

3.3. Optimization of Incubation Time

The incubation time strongly influences the response stability of the aptasensor. To appraise the incubation time of S. aureus on the aptasensor surface, different times from 10 min to 50 min were investigated by monitoring the recorded DPVs in 0.1 M PBS containing 0.1 M KCl and 1 mM [Fe(CN)6]3−/4− (Figure 4). The current difference (ΔI) value in the absence and presence of 1.5 × 106 CFU mL 1 of S. aureus was significantly decreased by the time increasing from 10 min to 30 min, attributing to occupying the surface’s active sites via the target and the target-Apt complex forming on the surface. Since the ΔI value was not approximately changed by more times from 30 min to 50 min and finally tended to a steady state, 30 min was considered the optimum incubation time for further experiments.

3.4. Analytical Performance of the Aptasensor

To appraise the analytical performance of the aptasensor, a series of different concentrations of S. aureus was injected into the aptasensor for 30 min. As indicated in Figure 5, the recorded DPVs of the aptasensor in the redox probe solution displays a current decrease by the increasing of the S. aureus concentration from 10 CFU mL 1 to 108 CFU mL 1 . This behavior may be stemmed from the fact that more concentrations of S. aureus on the aptasensor surface form more of the S. aureus/Apt complexes and enhance the electron transfer hindrance of redox marker on the sensing interface. Inset of Figure 5 presents a regression dependence of the current response to the logarithm of different S. aureus concentrations, as the analytical calibration depicted under an equation of ∆I (µA) = 3.8059 log CS. aureus − 1.38 (R2 = 0.9876). Accordingly, a limit of quantification (LOQ) of 12 CFU mL 1 and detection (LOD) of 1 CFU mL 1 were calculated based on the S/N of 3. The examination of the S. aureus assay (1.5 × 103 CFU mL 1 ) by the aptasensor through five times repetitions demonstrated suitable repeatability of the method with a relative standard deviation (RSD%) value of 3.52%. Furthermore, the detection of 1.5 × 103 CFU mL 1 of S. aureus by the five fabricated aptasensors confirmed a reproducible response of the aptasensor under the RSD% value of 2.59%.
Anti-interference ability of the aptasensor in the S. aureus monitoring in the presence of other similar bacteria is crucial in avoiding false identification. To appraise the selectivity of the aptasensor, three different strains of the cultured bacteria, including Salmon, E. coli, S. flexneri, and S. aureus (1.5 × 107 CFU mL 1 ), were separately measured (Figure 6a–d). S. aureus remarkably changed the signal, while other bacteria strains had no significant interference in the aptasensor response in 0.1 M PBS containing 0.1 M KCl and 1 mM [Fe(CN)6]3−/4−. So, the specific analysis of the aptasensor is confirmed. This satisfactory performance of the developed aptasensor compared to some reported sensors and aptasensors listed in Table 1 can be asserted due to using the efficient sensing interface because of some reasons as follows: (1) facilitating the mass transfer among the formed channels of the spongin with the porous network, (2) enhancing the electron transfer among the spongin-Cu2WO4(OH)2 conductive structure, (3) embedding a high surface to volume ratio in the presence of AgNPs, (4) providing more loading of Apt sequences on the surface via a strong bonding through SAM linkage, and (5) amplifying the sensing selectivity by utilizing Apt.

3.5. Real Sample Analysis

The human serum as the real sample was tested to examine the feasibility of the aptasensor for S. aureus tracking. The DPVs of the pretreated serum samples (described in the experimental part) analyzed by the aptasensor were recorded, and the results were evaluated. A series of calculated recovery values in the range of 94.2% to 103.4% with an RSD% value less than 3.01% revealed acceptable screening of S. aureus in the serum sample by the developed aptasensor.

4. Conclusions

To sum up, the highly porous spongin-Cu2WO4(OH)2@AgNPs nanocomposite was greenly synthesized. This biocompatible nanocomposite was utilized as the GCE modifier in the aptasensor fabrication due to its fast mass and electron transfer with a large surface area. The highly sensitive sensing interface with many active sites was achieved by loading Apt captures on the nanocomposite via AgNPs linkage. By binding S. aureus on the aptasensor surface and the corresponding increasing spatial barrier of the surface, the S. aureus was sensitively measured under a wider LDR with lower LOD, and LOQ values than many previously reported aptasensors. S. aureus was selectively distinguished in the presence of some similar strains of the cultured bacteria and human serum. The proposed methodology is promising for the nanocomposite immobilization on other carbon-based platforms as the electrode, such as carbon cloth, felt graphite, or screen-printed carbon electrode (SPCE), to attach further layers of AgNPs and Apt. Accordingly, a flexible and miniaturized aptasensor based on flexible or flat surfaces can be generated for S. aureus detection. Furthermore, various aptasensors can be designed for sensing other targets by only changing the Apt sequence. Because the reticular structure of the spongin gives adequate access to the catalysis process, this renewable bioresource can be used for more electrochemical fields, such as supercapacitors, batteries, and fuel cells.

Author Contributions

F.S.-F. and S.F. acquired various electrochemical data; M.A. and I.P. synthesized and characterized nanocomposite; A.H.K. edited the manuscript; H.E., M.R.-N., and F.A. proposed the research, provided all facilities, and investigated the different data and furthermore edited the manuscript. All authors have read and agreed to the published version of the manuscript.

Funding

The authors gratefully acknowledge the financial support of this proposal by the Iran University of Medical Sciences with grant no: 12377. In addition, this proposal has the ethical code of IR.IUMS.REC.1398.787. HE was partially supported by National Science Centre, Poland MAESTRO 12 project (2020/38/A/ST5/00151) and Alexander von Humboldt Polish Honorary Research Scholarship (FNP, Poland). IP was supported by Polish National Agency for Academic Exchange (NAWA) Ulam International Programme PPN/ULM/2020/1/00177.

Institutional Review Board Statement

Not applicable.

Informed Consent Statement

Not applicable.

Data Availability Statement

Not applicable.

Acknowledgments

This work was partially supported by the Alexander von Humboldt Foundation (Georg Forster research fellowship for experienced researchers program).

Conflicts of Interest

The authors declare no conflict of interest.

References

  1. Ehrlich, H.; Wysokowski, M.; Żółtowska-Aksamitowska, S.; Petrenko, I.; Jesionowski, T. Collagens of poriferan origin. Mar. Drugs 2018, 16, 79. [Google Scholar] [CrossRef] [PubMed]
  2. Jesionowski, T.; Norman, M.; Żółtowska-Aksamitowska, S.; Petrenko, I.; Joseph, Y.; Ehrlich, H. Marine spongin: Naturally prefabricated 3D scaffold-based biomaterial. Mar. Drugs 2018, 16, 88. [Google Scholar] [CrossRef] [PubMed]
  3. Tsurkan, D.; Wysokowski, M.; Petrenko, I.; Voronkina, A.; Khrunyk, Y.; Fursov, A.; Ehrlich, H. Modern scaffolding strategies based on naturally pre-fabricated 3D biomaterials of poriferan origin. Appl. Phys. A 2020, 126, 382. [Google Scholar] [CrossRef]
  4. Khrunyk, Y.; Lach, S.; Petrenko, I.; Ehrlich, H. Progress in modern marine biomaterials research. Mar. Drugs 2020, 18, 589. [Google Scholar] [CrossRef]
  5. Zdarta, J.; Norman, M.; Smułek, W.; Moszyński, E.; Kaczorek, D.; Stelling, A.L.; Ehrlich, H.; Jesionowski, T. Spongin-based scaffolds from Hippospongia communis demosponge as an effective support for lipase immobilization. Catalysts 2017, 7, 147. [Google Scholar] [CrossRef]
  6. Petrenko, I.; Summers, A.P.; Simon, P.; Żółtowska-Aksamitowska, S.; Motylenko, M.; Schimpf, C.; Rafaja, D.; Roth, F.; Kummer, K.; Brendler, E. Extreme biomimetics: Preservation of molecular detail in centimeter-scale samples of biological meshes laid down by sponges. Sci. Adv. 2019, 5, eaax2805. [Google Scholar] [CrossRef] [PubMed]
  7. Tsurkan, D.; Simon, P.; Schimpf, C.; Motylenko, M.; Rafaja, D.; Roth, F.; Inosov, D.S.; Makarova, A.A.; Stepniak, I.; Petrenko, I. Extreme Biomimetics: Designing of the First Nanostructured 3D Spongin–Atacamite Composite and its Application. Adv. Mater. 2021, 33, 2101682. [Google Scholar] [CrossRef]
  8. Żółtowska, S.; Koltsov, I.; Alejski, K.; Ehrlich, H.; Ciałkowski, M.; Jesionowski, T. Thermal decomposition behaviour and numerical fitting for the pyrolysis kinetics of 3D spongin-based scaffolds. The classic approach. Polym. Test. 2021, 97, 107148. [Google Scholar] [CrossRef]
  9. Simion, P.; Philippe, H.; Baurain, D.; Jager, M.; Richter, D.J.; Di Franco, A.; Roure, B.; Satoh, N.; Quéinnec, É.; Ereskovsky, A. A large and consistent phylogenomic dataset supports sponges as the sister group to all other animals. Curr. Biol. 2017, 27, 958–967. [Google Scholar] [CrossRef]
  10. Zheng, Q.; Bao, C.; Guo, W.; Li, S.; Chen, J.; Chen, B.; Luo, Y.; Lyu, D.; Li, Y.; Shi, G. Circular RNA profiling reveals an abundant circHIPK3 that regulates cell growth by sponging multiple miRNAs. Nat. Commun. 2016, 7, 11215. [Google Scholar] [CrossRef] [Green Version]
  11. Chen, W.; Rakhi, R.; Hu, L.; Xie, X.; Cui, Y.; Alshareef, H.N. High-performance nanostructured supercapacitors on a sponge. Nano Lett. 2011, 11, 5165–5172. [Google Scholar] [CrossRef] [PubMed]
  12. Lu, H.; Ko, Y.-G.; Kawazoe, N.; Chen, G. Cartilage tissue engineering using funnel-like collagen sponges prepared with embossing ice particulate templates. Biomaterials 2010, 31, 5825–5835. [Google Scholar] [CrossRef]
  13. Liu, X.; Du, X.; Wang, X.; Li, N.; Xu, P.; Ding, Y. Improved microbial fuel cell performance by encapsulating microbial cells with a nickel-coated sponge. Biosens. Bioelectron. 2013, 41, 848–851. [Google Scholar] [CrossRef] [PubMed]
  14. Liu, Y.; Zheng, H.; Liu, M. High performance strain sensors based on chitosan/carbon black composite sponges. Mater. Des. 2018, 141, 276–285. [Google Scholar] [CrossRef]
  15. Li, X.-P.; Li, Y.; Li, X.; Song, D.; Min, P.; Hu, C.; Zhang, H.-B.; Koratkar, N.; Yu, Z.-Z. Highly sensitive, reliable and flexible piezoresistive pressure sensors featuring polyurethane sponge coated with MXene sheets. J. Colloid Interface Sci. 2019, 542, 54–62. [Google Scholar] [CrossRef]
  16. Yao, H.B.; Ge, J.; Wang, C.F.; Wang, X.; Hu, W.; Zheng, Z.J.; Ni, Y.; Yu, S.H. A flexible and highly pressure-sensitive graphene–polyurethane sponge based on fractured microstructure design. Adv. Mater. 2013, 25, 6692–6698. [Google Scholar] [CrossRef] [PubMed]
  17. Wu, X.; Han, Y.; Zhang, X.; Zhou, Z.; Lu, C. Large-area compliant, low-cost, and versatile pressure-sensing platform based on microcrack-designed carbon Black@ polyurethane sponge for human–machine interfacing. Adv. Funct. Mater. 2016, 26, 6246–6256. [Google Scholar] [CrossRef]
  18. Guo, S.; Zhang, C.; Yang, M.; Zhou, Y.; Bi, C.; Lv, Q.; Ma, N. A facile and sensitive electrochemical sensor for non-enzymatic glucose detection based on three-dimensional flexible polyurethane sponge decorated with nickel hydroxide. Anal. Chim. Acta 2020, 1109, 130–139. [Google Scholar] [CrossRef]
  19. Wen, X.H.; Zhao, X.H.; Peng, B.F.; Yuan, K.P.; Li, X.X.; Zhu, L.Y.; Lu, H.L. Facile preparation of an electrochemical aptasensor based on Au NPs/graphene sponge for detection of homocysteine. App. Surf. Sci. 2021, 556, 149735. [Google Scholar] [CrossRef]
  20. Hrubantova, A.; Hippler, R.; Wulff, H.; Cada, M.; Gedeon, O.; Jiricek, P.; Houdkova, J.; Olejnicek, J.; Nepomniashchaia, N.; Helm, C.A.; et al. Copper tungsten oxide (CuxWOy) thin films for optical and photoelectrochemical applications deposited by reactive high power impulse magnetron co-sputtering. J. Appl. Phys. 2022, 132, 215301. [Google Scholar] [CrossRef]
  21. Shahdost-Fard, F.; Roushani, M. Impedimetric detection of cocaine by using a cocaine binding aptamer attached to a screen printed electrode modified with a dendrimer/silver nanoparticle nanocomposite. MCA Microchim. Acta 2018, 185, 214. [Google Scholar]
  22. Rajkovic, A.; Jovanovic, J.; Monteiro, S.; Decleer, M.; Andjelkovic, M.; Foubert, A.; Beloglazova, N.; Tsilla, V.; Sas, B.; Madder, A. Detection of toxins involved in foodborne diseases caused by Gram-positive bacteria. Compr. Rev. Food Sci. Food Saf. 2020, 19, 1605–1657. [Google Scholar] [CrossRef] [PubMed]
  23. Witt, A.; Mason, M.J.; Burgess, K.; Flocke, S.; Zyzanski, S. A case control study of bacterial species and colony count in milk of breastfeeding women with chronic pain. Breastfeed. Med. 2014, 9, 29–34. [Google Scholar] [CrossRef] [PubMed]
  24. Qin, H.; Shi, X.; Yu, L.; Li, K.; Wang, J.; Chen, J.; Yang, F.; Xu, H.; Xu, H. Multiplex real-time PCR coupled with sodium dodecyl sulphate and propidium monoazide for the simultaneous detection of viable Listeria monocytogenes, Cronobacter sakazakii, Staphylococcus aureus and Salmonella spp. in milk. Int. Dairy J. 2020, 108, 104739. [Google Scholar] [CrossRef]
  25. Liu, S.; Li, H.; Hassan, M.M.; Zhu, J.; Wang, A.; Ouyang, Q.; Zareef, M.; Chen, Q. Amplification of Raman spectra by gold nanorods combined with chemometrics for rapid classification of four Pseudomonas. Int. J. Food Microbiol. 2019, 304, 58–67. [Google Scholar] [CrossRef] [PubMed]
  26. Reddy, P.N.; Nagaraj, S.; Sripathy, M.H.; Batra, H.V. Use of biotin-labeled IgY overcomes protein A interference in immunoassays involving Staphylococcus aureus antigens. Ann. Microbiol. 2015, 65, 1915–1922. [Google Scholar] [CrossRef]
  27. Kuang, H.; Wang, W.; Xu, L.; Ma, W.; Liu, L.; Wang, L.; Xu, C. Monoclonal antibody-based sandwich ELISA for the detection of staphylococcal enterotoxin A. Int. J. Environ. Res. Public Health 2013, 10, 1598–1608. [Google Scholar] [CrossRef]
  28. Pires, J.; Novais, A.; Peixe, L. Blue-carba, an easy biochemical test for detection of diverse carbapenemase producers directly from bacterial cultures. J. Clin. Microbiol. 2013, 51, 4281–4283. [Google Scholar] [CrossRef]
  29. Ranjbar, S.; Shahrokhian, S. Design and fabrication of an electrochemical aptasensor using Au nanoparticles/carbon nanoparticles/cellulose nanofibers nanocomposite for rapid and sensitive detection of Staphylococcus aureus. Bioelectrochemistry 2018, 123, 70–76. [Google Scholar] [CrossRef]
  30. Sohouli, E.; Ghalkhani, M.; Zargar, T.; Joseph, Y.; Rahimi-Nasrabadi, M.; Ahmadi, F.; Plonska-Brzezinska, M.E.; Ehrlich, H. A new electrochemical aptasensor based on gold/nitrogen-doped carbon nano-onions for the detection of Staphylococcus aureus. Electrochim. Acta 2022, 403, 139633. [Google Scholar] [CrossRef]
  31. Ghalkhani, M.; Sohouli, E.; Khaloo, S.S.; Vaziri, M.H. Architecting of an aptasensor for the Staphylococcus aureus analysis by modification of the screen-printed carbon electrode with aptamer/Ag–Cs-Gr QDs/NTiO2. Chemosphere 2022, 293, 133597. [Google Scholar] [CrossRef] [PubMed]
  32. Cao, X.; Li, S.; Chen, L.; Ding, H.; Xu, H.; Huang, Y.; Li, J.; Liu, N.; Cao, W.; Zhu, Y. Combining use of a panel of ssDNA aptamers in the detection of Staphylococcus aureus. Nucleic Acids Res. 2009, 37, 4621–4628. [Google Scholar] [CrossRef] [PubMed]
  33. McFarland, J. The nephelometer: An instrument for estimating the number of bacteria in suspensions used for calculating the opsonic index and for vaccines. JAMA J. Am. Med. Assoc. 1907, 49, 1176–1178. [Google Scholar] [CrossRef]
  34. Szatkowski, T.; Kopczyński, K.; Motylenko, M.; Borrmann, H.; Mania, B.; Graś, M.; Lota, G.; Bazhenov, V.V.; Rafaja, D.; Roth, F. Extreme biomimetics: A carbonized 3D spongin scaffold as a novel support for nanostructured manganese oxide (IV) and its electrochemical applications. Nano Res. 2018, 11, 4199–4214. [Google Scholar] [CrossRef]
  35. Medidi, S.; Markapurapu, S.; Kotupalli, M.R.; Chinnam, R.K.R.; Susarla, V.M.; Gandham, H.B.; Sanasi, P.D. Visible light photocatalytic degradation of methylene blue and malachite green dyes with CuWO4-GO nano composite. MRC Mod. Res. Catal. 2018, 7, 17. [Google Scholar] [CrossRef]
  36. Shahdost-Fard, F.; Roushani, M. Cu-In-S/ZnS quantum dots/silver nanoparticles nanocomposites-modified electrode as an electrochemical label-free aptasensor for the detection of β-casomorphin 7 in early distinguish of autism. Microchem. J. 2020, 159, 105514. [Google Scholar] [CrossRef]
  37. Demir, N.; Atacan, K.; Ozme, M.; Zeki Bas, S. Design of a new electrochemical sensing system based on MoS2–TiO2/reduced graphene oxide nanocomposite for the detection of paracetamol. NJC New J. Chem. 2020, 44, 11759–11767. [Google Scholar] [CrossRef]
  38. Abbaspour, A.; Norouz-Sarvestani, F.; Noori, A.; Soltani, N. Aptamer-conjugated silver nanoparticles for electrochemical dual-aptamer-based sandwich detection of staphylococcus aureus. Biosens. Bioelectron. 2015, 68, 149–155. [Google Scholar] [CrossRef]
  39. Jia, F.; Duan, N.; Wu, S.; Ma, X.; Xia, Y.; Wang, Z.; Wei, X. Impedimetric aptasensor for Staphylococcus aureus based on nanocomposite prepared from reduced graphene oxide and gold nanoparticles. Microchim. Acta 2014, 181, 967–974. [Google Scholar] [CrossRef]
  40. Reich, P.; Stoltenburg, R.; Strehlitz, B.; Frense, D.; Beckmann, D. Development of an Impedimetric Aptasensor for the Detection of Staphylococcus aureus. Int. J. Mol. Sci. 2017, 18, 2484. [Google Scholar] [CrossRef]
  41. Zelada-Guillén, G.A.; Sebastián-Avila, J.L.; Blondeau, P.; Riu, J.; Rius, F.X. Label-free detection of Staphylococcus aureus in skin using real-time potentiometric biosensors based on carbon nanotubes and aptamers. Biosens. Bioelectron. 2012, 31, 226–232. [Google Scholar] [CrossRef]
  42. Yuan, J.; Wu, S.; Duan, N.; Ma, X.; Xia, Y.; Chen, J.; Ding, Z.; Wang, Z. A sensitive gold nanoparticle-based colorimetric aptasensor for Staphylococcus aureus. Talanta 2014, 127, 163–168. [Google Scholar] [CrossRef] [PubMed]
  43. Boujday, S.; Briandet, R.; Salmain, M.; Herry, J.M.; Marnet, P.G.; Gautier, M.; Pradier, C.M. Detection of pathogenic Staphylococcus aureus bacteria by gold based immunosensors. Microchim. Acta 2008, 163, 203–209. [Google Scholar] [CrossRef]
  44. Xue, X.; Pan, J.; Xie, H.; Wang, J.; Zhang, S. Fluorescence detection of total count of Escherichia coli and Staphylococcus aureus on water-soluble CdSe quantum dots coupled with bacteria. Talanta 2009, 77, 1808–1813. [Google Scholar] [CrossRef] [PubMed]
Scheme 1. The aptasensor fabrication procedure for S. aureus detection.
Scheme 1. The aptasensor fabrication procedure for S. aureus detection.
Biosensors 13 00271 sch001
Figure 1. XRD patterns and FESEM images of the (a,d) spongin, (b,e) spongin-Cu2WO4(OH)2, and (c,f) spongin-Cu2WO4(OH)2@AgNPs.
Figure 1. XRD patterns and FESEM images of the (a,d) spongin, (b,e) spongin-Cu2WO4(OH)2, and (c,f) spongin-Cu2WO4(OH)2@AgNPs.
Biosensors 13 00271 g001
Figure 2. (a) FTIR and (b) EDX spectra from the spongin-Cu2WO4(OH)2@AgNPs.
Figure 2. (a) FTIR and (b) EDX spectra from the spongin-Cu2WO4(OH)2@AgNPs.
Biosensors 13 00271 g002
Figure 3. The recorded CVs (at a scan rate of 50 mV s 1 ) and Nyquist curves of the GCE, spongin-Cu2WO4(OH)2/GCE, spongin-Cu2WO4(OH)2@AgNPs/GCE, Apt/spongin-Cu2WO4(OH)2@AgNPs/GCE, and 108 CFU mL 1  S. aureus incubated on the Apt/spongin-Cu2WO4(OH)2@AgNPs/GCE in 0.1 M PBS containing 0.1 M KCl and 1 mM [Fe(CN)6]3−/4− as the redox marker.
Figure 3. The recorded CVs (at a scan rate of 50 mV s 1 ) and Nyquist curves of the GCE, spongin-Cu2WO4(OH)2/GCE, spongin-Cu2WO4(OH)2@AgNPs/GCE, Apt/spongin-Cu2WO4(OH)2@AgNPs/GCE, and 108 CFU mL 1  S. aureus incubated on the Apt/spongin-Cu2WO4(OH)2@AgNPs/GCE in 0.1 M PBS containing 0.1 M KCl and 1 mM [Fe(CN)6]3−/4− as the redox marker.
Biosensors 13 00271 g003
Figure 4. Effect of incubation time of S. aureus on the aptasensor signal for 1.5 × 106 CFU mL 1 of S. aureus in 0.1 M PBS containing 0.1 M KCl and 1 mM ferro/ferricyanide ( Fe CN 6 3 / 4 ) as a redox marker.
Figure 4. Effect of incubation time of S. aureus on the aptasensor signal for 1.5 × 106 CFU mL 1 of S. aureus in 0.1 M PBS containing 0.1 M KCl and 1 mM ferro/ferricyanide ( Fe CN 6 3 / 4 ) as a redox marker.
Biosensors 13 00271 g004
Figure 5. The DPVs of the aptasensor and inset a corresponding calibration curve after incubation with a series of different concentrations of S. aureus from 10 CFU mL 1 to 108 CFU mL 1 during an incubation time of 30 min in 0.1 M PBS containing 0.1 M KCl and 1 mM Fe CN 6 3 / 4 as the redox marker.
Figure 5. The DPVs of the aptasensor and inset a corresponding calibration curve after incubation with a series of different concentrations of S. aureus from 10 CFU mL 1 to 108 CFU mL 1 during an incubation time of 30 min in 0.1 M PBS containing 0.1 M KCl and 1 mM Fe CN 6 3 / 4 as the redox marker.
Biosensors 13 00271 g005
Figure 6. The DPVs of the aptasensor after incubation of 1.5 × 107 CFU mL 1 of (a) S. aureus, (b) S. flexneri, (c) E. coli, and (d) Salmon for 30 min in 0.1 M PBS containing 0.1 M KCl and 1 mM ([Fe(CN)6]3−/4−) as the redox marker.
Figure 6. The DPVs of the aptasensor after incubation of 1.5 × 107 CFU mL 1 of (a) S. aureus, (b) S. flexneri, (c) E. coli, and (d) Salmon for 30 min in 0.1 M PBS containing 0.1 M KCl and 1 mM ([Fe(CN)6]3−/4−) as the redox marker.
Biosensors 13 00271 g006
Table 1. A comparison of the analytical performance of the aptasensor with some reported sensors and aptasensors in S. aureus detection.
Table 1. A comparison of the analytical performance of the aptasensor with some reported sensors and aptasensors in S. aureus detection.
StrategyTechniqueLOD
CFU mL−1
LDR
CFU mL−1
Ref.
Apt/S. aureus/Apt-AgNPDPV110–106[38]
Apt/rGO/AuNPsImpedimetric1010–106[39]
Apt/gold electrodeImpedimetric1010–104[40]
Apt/AuNPs/CNPs/CNFsImpedimetric 1.2 × 101–1.2 × 108[29]
Apt/SWCNTPotentiometric 103–108[41]
Apt/AuNPsColorimetric910–106[42]
CNT/AptPotentiometric8 × 1028 × 102–108[41]
Gold-based immunosensorsPM-RAIRS105[43]
CdSe QDFluorometric102102–107[44]
Apt/spongin-Cu2WO4(OH)2@AgNPs/GCEDPV110–108This study
rGO: reduced graphene oxide. SWCNT: single-walled carbon nanotube. CNP: carbon nanoparticles. CNF: cellulose nanofibers. CNT: carbon nanotube. PM-RAIRS: polarization modulation reflection absorption infrared spectroscopy. QDs: quantum dots.
Disclaimer/Publisher’s Note: The statements, opinions and data contained in all publications are solely those of the individual author(s) and contributor(s) and not of MDPI and/or the editor(s). MDPI and/or the editor(s) disclaim responsibility for any injury to people or property resulting from any ideas, methods, instructions or products referred to in the content.

Share and Cite

MDPI and ACS Style

Shahdost-Fard, F.; Faridfar, S.; Keihan, A.H.; Aghaei, M.; Petrenko, I.; Ahmadi, F.; Ehrlich, H.; Rahimi-Nasrabadi, M. Applicability of a Green Nanocomposite Consisted of Spongin Decorated Cu2WO4(OH)2 and AgNPs as a High-Performance Aptasensing Platform in Staphylococcus aureus Detection. Biosensors 2023, 13, 271. https://doi.org/10.3390/bios13020271

AMA Style

Shahdost-Fard F, Faridfar S, Keihan AH, Aghaei M, Petrenko I, Ahmadi F, Ehrlich H, Rahimi-Nasrabadi M. Applicability of a Green Nanocomposite Consisted of Spongin Decorated Cu2WO4(OH)2 and AgNPs as a High-Performance Aptasensing Platform in Staphylococcus aureus Detection. Biosensors. 2023; 13(2):271. https://doi.org/10.3390/bios13020271

Chicago/Turabian Style

Shahdost-Fard, Faezeh, Shahin Faridfar, Amir Homayoun Keihan, Mohammad Aghaei, Iaroslav Petrenko, Farhad Ahmadi, Hermann Ehrlich, and Mehdi Rahimi-Nasrabadi. 2023. "Applicability of a Green Nanocomposite Consisted of Spongin Decorated Cu2WO4(OH)2 and AgNPs as a High-Performance Aptasensing Platform in Staphylococcus aureus Detection" Biosensors 13, no. 2: 271. https://doi.org/10.3390/bios13020271

Note that from the first issue of 2016, this journal uses article numbers instead of page numbers. See further details here.

Article Metrics

Back to TopTop