The Effects of Organic and Mineral Fertilization on Soil Enzyme Activities and Bacterial Community in the Below- and Above-Ground Parts of Wheat
Abstract
:1. Introduction
2. Materials and Methods
2.1. Experimental Site and Design
2.2. Soil Sampling and Analysis
2.3. Soil Enzymes Assay
2.4. Illumina High-Throughput Sequencing and Data Processing
2.4.1. DNA Extraction
2.4.2. Polymerase Chain Reaction (PCR) Amplification
2.4.3. Bioinformatics Analysis
2.5. Statistical Analyses
3. Results
3.1. Soil Properties in the Bulk and Rhizosphere Soil
3.2. Soil Enzyme Activities
3.3. BacterialCommunity
3.3.1. Alpha Diversity (Shannon Index)
3.3.2. Bacterial Community Structures
3.3.3. Genus Differed in Different Treatments
3.4. Correlations Analysis between Soil Properties and Bacterial Community Structure
4. Discussion
4.1. Effect of Fertilization on Soil Properties
4.2. Effect of Fertilization on Soil Enzyme Activities
4.3. Effects of Fertilization on Soil Bacterial Diversity and Community Composition
5. Conclusions
Author Contributions
Funding
Conflicts of Interest
References
- Altieri, M.A. The ecological role of biodiversity in agroecosystems. Agric. Ecosyst. Environ. 1999, 74, 19–31. [Google Scholar] [CrossRef] [Green Version]
- Wang, Z.; Liu, Y.; Zhao, L.; Zhang, W.; Liu, L. Change of soil microbial community under long-term fertilization in a reclaimed sandy agricultural ecosystem. PeerJ 2019, 7, 1–21. [Google Scholar] [CrossRef]
- Flandroy, L.; Poutahidis, T.; Berg, G.; Clarke, G.; Dao, M.C.; Decaestecker, E.; Furman, E.; Haahtela, T.; Massart, S.; Plovier, H.; et al. The impact of human activities and lifestyles on the interlinked microbiota and health of humans and of ecosystems. Sci. Total Environ. 2018, 627, 1018–1038. [Google Scholar] [CrossRef] [PubMed]
- Suleiman, A.K.A.; Manoeli, L.; Boldo, J.T.; Pereira, M.G.; Roesch, L.F.W. Shifts in soil bacterial community after eight years of land-use change. Syst. Appl. Microbiol. 2013, 36, 137–144. [Google Scholar] [CrossRef] [PubMed]
- Sun, R.; Zhang, X.X.; Guo, X.; Wang, D.; Chu, H. Bacterial diversity in soils subjected to long-term chemical fertilization can be more stably maintained with the addition of livestock manure than wheat straw. Soil Biol. Biochem. 2015, 88, 9–18. [Google Scholar] [CrossRef]
- Tiemann, L.K.; Grandy, A.S.; Atkinson, E.E.; Marin-Spiotta, E.; Mcdaniel, M.D. Crop rotational diversity enhances belowground communities and functions in an agroecosystem. Ecol. Lett. 2015, 18, 761–771. [Google Scholar] [CrossRef]
- D’Acunto, L.; Andrade, J.F.; Poggio, S.L.; Semmartin, M. Diversifying crop rotation increased metabolic soil diversity and activity of the microbial community. Agric. Ecosyst. Environ. 2018, 257, 159–164. [Google Scholar] [CrossRef]
- Juan, L.I.; Bing-Qiangl, Z.; Xiu-Yingl, L.I.; Rui-Bol, J.; Bing, S.H. Effects of Long-Term Combined Application of Organic and Mineral Fertilizers on Microbial Biomass, Soil Enzyme Activities and Soil Fertility. Agric. Sci. China 2008, 7, 336–343. [Google Scholar] [CrossRef]
- Garciá-Orenes, F.; Morugań-Coronado, A.; Zornoza, R.; Scow, K. Changes in soil microbial community structure influenced by agricultural management practices in a Mediterranean agro-ecosystem. PLoS ONE 2013, 8, e80522. [Google Scholar] [CrossRef]
- Kallenbach, C.M.; Wallenstein, M.D.; Schipanksi, M.E.; Stuart Grandy, A. Managing agroecosystems for soil microbial carbon use efficiency: Ecological unknowns, potential outcomes, and a path forward. Front. Microbiol. 2019, 10, 1–8. [Google Scholar] [CrossRef] [Green Version]
- Cai, F.; Pang, G.; Li, R.X.; Li, R.; Gu, X.L.; Shen, Q.R.; Chen, W. Bioorganic fertilizer maintains a more stable soil microbiome than chemical fertilizer for monocropping. Biol. Fertil. Soils 2017, 53, 861–872. [Google Scholar] [CrossRef]
- Cai, A.; Xu, M.; Wang, B.; Zhang, W.; Liang, G.; Hou, E. Manure acts as a better fertilizer for increasing crop yields than synthetic fertilizer does by improving soil fertility. Soil Tillage Res. 2019, 189, 168–175. [Google Scholar] [CrossRef]
- Okore, C.; Ogechukwu, M.; Bright, O.; Assumpta, U.; Agaptus, O.; Uloma, N.; Chimahhalam, A. Effects of NPK fertilizer on soil enzymes and micro biota. GRF Davos Planet@Risk 2014, 2, 249–254. [Google Scholar]
- Geisseler, D.; Scow, K.M. Long-term effects of mineral fertilizers on soil microorganisms—A review. Soil Biol. Biochem. 2014, 75, 54–63. [Google Scholar] [CrossRef]
- Xu, L.; Yi, M.; Yi, H.; Guo, E.; Zhang, A. Manure and mineral fertilization change enzyme activity and bacterial community in millet rhizosphere soils. World J. Microbiol. Biotechnol. 2018, 34, 1–13. [Google Scholar] [CrossRef]
- Holík, L.; Hlisnikovský, L.; Honzík, R.; Trögl, J.; Burdová, H.; Popelka, J. Soil microbial communities and enzyme activities after long-term application of inorganic and organic fertilizers at different depths of the soil profile. Sustainability 2019, 11, 3251. [Google Scholar] [CrossRef] [Green Version]
- Wang, W.; Luo, X.; Chen, Y.; Ye, X.; Wang, H.; Cao, Z.; Ran, W.; Cui, Z. Succession of composition and function of soil bacterial communities during key rice growth stages. Front. Microbiol. 2019, 10, 1–11. [Google Scholar] [CrossRef] [Green Version]
- Chang, E.; Chung, R.; Tsai, Y. Effect of different application rates of organic fertilizer on soil enzyme activity and microbial population. Soil Sci. Plant Nutr. 2017, 53, 132–140. [Google Scholar] [CrossRef]
- Wang, Q.; Ma, M.; Jiang, X.; Guan, D.; Wei, D.; Zhao, B. Impact of 36 years of nitrogen fertilization on microbial community composition and soil carbon cycling-related enzyme activities in rhizospheres and bulk soils in northeast China. Appl. Soil Ecol. 2019, 136, 148–157. [Google Scholar] [CrossRef]
- Van der Bom, F.; Nunes, I.; Sophie, N.; Hansen, V.; Bonnichsen, L.; Magid, J.; Nybroe, O.; Stoumann, L. Long-term fertilisation form, level and duration affect the diversity, structure and functioning of soil microbial communities in the field. Soil Biol. Biochem. 2018, 122, 91–103. [Google Scholar] [CrossRef]
- Badji, A. Effects of Biochar on Microbiological Activities of Soil under Strong Nitrogen Inputs (Gardening); Master 2: Biotechnol; Plant and Microbial, University Cheikh Anta Diop of Dakar: Dakar, Senegal, 2011; pp. 1–60. [Google Scholar]
- Latini, A.; Bacci, G.; Teodoro, M.; Gattia, D.M.; Bevivino, A.; Trakal, L. The impact of soil-applied biochars from different vegetal feedstocks on durum wheat plant performance and rhizospheric bacterial microbiota in low metal-contaminated soil. Front. Microbiol. 2019, 10, 1–20. [Google Scholar] [CrossRef] [PubMed]
- Elzobair, K.A.; Stromberger, M.E.; Ippolito, J.A.; Lentz, R.D. Contrasting effects of biochar versus manure on soil microbial communities and enzyme activities in an Aridisol. Chemosphere 2016, 142, 145–152. [Google Scholar] [CrossRef] [PubMed]
- Sandhu, S.; Sekaran, U.; Ozlu, E.; Hoilett, N.O.; Kumar, S. Short-term impacts of biochar and manure application on soil labile carbon fractions, enzyme activity, and microbial community structure. Biochar 2019, 1, 271–282. [Google Scholar] [CrossRef] [Green Version]
- Novak, J.M.; Busscher, W.J.; Watts, D.W.; Amonette, J.E.; Ippolito, J.A.; Lima, I.M.; Gaskin, J.; Das, K.C.; Steiner, C.; Ahmedna, M.; et al. Biochars impact on soil-moisture storage in an ultisol and two aridisols. Soil Sci. 2012, 177, 310–320. [Google Scholar] [CrossRef] [Green Version]
- Ullah, M.S.; Islam, M.S.; Islam, M.A.; Haque, T. Effects of organic manures and chemical fertilizers on the yield of brinjal and soil properties. J. Bangladesh Agric. Univ. 2008, 6, 271–276. [Google Scholar] [CrossRef] [Green Version]
- Balasubramanian, A. Soil Microorganisms. Univ. Mysore 2017. [Google Scholar] [CrossRef]
- Zhang, Y.; Shen, H.; He, X.; Thomas, B.W.; Lupwayi, N.Z.; Hao, X.; Thomas, M.C.; Shi, X. Fertilization shapes bacterial community structure by alteration of soil pH. Front. Microbiol. 2017, 8, 1–11. [Google Scholar] [CrossRef] [Green Version]
- Liu, Z.; Rong, Q.; Zhou, W.; Liang, G. Effects of inorganic and organic amendment on soil chemical properties, enzyme activities, microbial community and soil quality in yellow clayey soil. PLoS ONE 2017, 12, e0172767. [Google Scholar] [CrossRef]
- Fan, K.; Cardona, C.; Li, Y.; Shi, Y.; Xiang, X.; Shen, C.; Wang, H.; Gilbert, J.A.; Chu, H. Rhizosphere-associated bacterial network structure and spatial distribution differ significantly from bulk soil in wheat crop fields. Soil Biol. Biochem. 2017, 113, 275–284. [Google Scholar] [CrossRef]
- Donn, S.; Kirkegaard, J.A.; Perera, G.; Richardson, A.E.; Watt, M. Evolution of bacterial communities in the wheat crop rhizosphere. Environ. Microbiol. 2015, 17, 610–621. [Google Scholar] [CrossRef]
- Schirawski, J.; Perlin, M.H. Plant—Microbe Interaction 2017—The Good, the Bad and the Diverse. Int. J. Mol. Sci. 2018, 19, 1374. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Suleiman, B.; Muhammad, B.L.; Jakada, B.H.; Vyas, N.L. Rhizosphere Microbiome and Plant Nutrition. Int. J. Emerg. Trends Sci. Technol. 2015, 2, 3208–3216. [Google Scholar] [CrossRef] [Green Version]
- Smalla, K.; Wieland, G.; Buchner, A.; Zock, A.; Parzy, J.; Kaiser, S.; Roskot, N.; Heuer, H.; Berg, G. Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: Plant-dependent enrichment and seasonal shifts revealed. Appl. Environ. Microbiol. 2001, 67, 4742–4751. [Google Scholar] [CrossRef] [Green Version]
- Hirsch, P.R.; Mauchline, T.H. Who’s who in the plant root microbiome? Nat. Biotechnol. 2012, 30, 961–962. [Google Scholar] [CrossRef] [PubMed]
- Chen, S.; Waghmode, T.R.; Sun, R.; Kuramae, E.E.; Hu, C.; Liu, B. Root-associated microbiomes of wheat under the combined effect of plant development and nitrogen fertilization. Microbiome 2019, 7, 136. [Google Scholar] [CrossRef] [Green Version]
- Langenheder, S.; Lindstro, E.S.; Tranvik, L.J. Structure and function of bacterial communities emerging from different sources under identical conditions. Appl. Environ. Microbiol. 2006, 72, 212–220. [Google Scholar] [CrossRef] [Green Version]
- Nannipieri, P.; Ascher, J.; Ceccherini, M.T.; Landi, L.; Pietramellara, G.; Renella, G. Microbial diversity and soil functions. Eur. J. Soil Sci. 2017, 68, 12–26. [Google Scholar] [CrossRef]
- Zhu, J.; Peng, H.; Ji, X.; Li, C.; Li, S. Effects of reduced inorganic fertilization and rice straw recovery on soil enzyme activities and bacterial community in double-rice paddy soils. Eur. J. Soil Biol. 2019, 94, 103116. [Google Scholar] [CrossRef]
- Wang, J.; Song, Y.; Ma, T.; Raza, W.; Li, J.; Howland, J.G.; Huang, Q.; Shen, Q. Impacts of inorganic and organic fertilization treatments on bacterial and fungal communities in a paddy soil. Appl. Soil Ecol. 2017, 112, 42–50. [Google Scholar] [CrossRef]
- Xu, N.; Tan, G.; Wang, H.; Gai, X. Effect of biochar additions to soil on nitrogen leaching, microbial biomass and bacterial community structure. Eur. J. Soil Biol. 2016, 74, 1–8. [Google Scholar] [CrossRef]
- Wang, Q.; Jiang, X.; Guan, D.; Wei, D.; Zhao, B.; Ma, M.; Chen, S.; Li, L.; Cao, F.; Li, J. Long-term fertilization changes bacterial diversity and bacterial communities in the maize rhizosphere of Chinese Mollisols. Appl. Soil Ecol. 2018, 125, 88–96. [Google Scholar] [CrossRef]
- Schmidt, J.E.; Kent, A.D.; Brisson, V.L.; Gaudin, A.C.M. Agricultural management and plant selection interactively affect rhizosphere microbial community structure and nitrogen cycling. Microbiome 2019, 7, 1–18. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Jingjing, S.; Jiaheng, M.; Xiaoying, W.; Cheng, W.; Jun, Y. Microorganism quantity and enzyme activities in wheat field subjected to different nitrogen fertilizer rate. Open Biotechnol. J. 2015, 9, 204–208. [Google Scholar] [CrossRef] [Green Version]
- Akça, M.O.; Namlı, A. Effects of poultry litter biochar on soil enzyme activities and tomato, pepper and lettuce plants growth. Eurasian J. Soil Sci. 2015, 4, 161–168. [Google Scholar] [CrossRef] [Green Version]
- Jacoby, R.; Peukert, M.; Succurro, A.; Koprivova, A.; Kopriva, S. The role of soil microorganisms in plant mineral nutrition—Current knowledge and future directions. Front. Plant Sci. 2017, 8, 1–19. [Google Scholar] [CrossRef] [Green Version]
- OlumuyiwaIdowu, O.; Olajire-Ajayi, B.; Dada, O.; Wahab, O. Effects of fertilizers on soil’s microbial growth and populations: A review. Am. J. Eng. Res. 2015, 4, 52–61. [Google Scholar]
- Xiao, S.; You, H.; You, W.; Liu, J.; Cai, C.; Wu, J.; Ji, Z.; Zhan, S.; Hu, Z.; Zhang, Z.; et al. Rhizosphere and bulk soil enzyme activities in a Nothotsuga longibracteata forest in the Tianbaoyan National Nature Reserve, Fujian Province, China. J. For. Res. 2016, 28, 521–528. [Google Scholar] [CrossRef]
- Mei, J.; Li, Z.; Sun, L.; Gui, H.; Wang, X. Assessment of heavy metals in the urban river sediments in Suzhou city, northern Anhui Province, China. Procedia Environ. Sci. 2011, 10, 2547–2553. [Google Scholar] [CrossRef] [Green Version]
- Molina, L.R. Standard Operating Procedure Available Phosphorus (Olsen Phosphorus); International Rice Research Institute (IRRI): Los Baños, Philippines, 2011; Volume 3, pp. 1–8. [Google Scholar]
- Saiya-cork, K.R.; Sinsabaugh, R.L.; Zak, D.R. The effects of long term nitrogen deposition on extracellular enzyme activity in an Acer saccharum forest soil. Soil Biol. Biochem. 2002, 34, 1309–1315. [Google Scholar] [CrossRef]
- Deforest, J.L. The influence of time, storage temperature, and substrate age on potential soil enzyme activity in acidic forest soils using MUB-linked substrates and L-DOPA. Soil Biol. Biochem. 2009, 41, 1180–1186. [Google Scholar] [CrossRef]
- Sinsabaugh, R.L.; Reynolds, H.; Long, T.M. Rapid assay for amidohydrolase (urease) activity in environmental samples. Soil Biol. Biochem. 2000, 32, 2095–2097. [Google Scholar] [CrossRef]
- Marx, M.; Wood, M.; Jarvis, S.C. A microplate fluorimetric assay for the study of enzyme diversity in soils. Soil Biol. Biochem. 2001, 33, 1633–1640. [Google Scholar] [CrossRef]
- Allison, S. Fluorimetric and oxidative enzyme assay protocol. Enzyme 2012, 1–6. Available online: https://allison.bio.uci.edu/protocols/fluorimetricenzymeprotocol.pdf (accessed on 7 July 2018).
- Xu, Z.; Yu, G.; Zhang, X.; Ge, J.; He, N.; Wang, Q.; Wang, D. The variations in soil microbial communities, enzyme activities and their relationships with soil organic matter decomposition along the northern slope of Changbai Mountain. Appl. Soil Ecol. 2014, 86, 19–29. [Google Scholar] [CrossRef]
- Ai, C.; Zhang, S.; Zhang, X.; Guo, D.; Zhou, W.; Huang, S. Distinct responses of soil bacterial and fungal communities to changes in fertilization regime and crop rotation. Geoderma 2018, 319, 156–166. [Google Scholar] [CrossRef]
- Assays, F.E.; Samples, M.; Allison, S.; Boulder, C.; Biology, S.; N-acetyl-, M. Fluorimetric enzyme assay protocol for marine samples. Enzyme 2009, 2–6. Available online: https://allison.bio.uci.edu/protocols/enzymeprotocolmarine100311.pdf (accessed on 31 July 2018).
- Fan, F.; Li, Z.; Wakelin, S.A.; Yu, W.; Liang, Y. Mineral fertilizer alters cellulolytic community structure and suppresses soil cellobiohydrolase activity in a long-term fertilization experiment. Soil Biol. Biochem. 2012, 55, 70–77. [Google Scholar] [CrossRef]
- Fan, F.; Yang, Q.; Li, Z.; Liang, Y. pH, phosphorus and C: P dominantly control the community structure of bacteria, fungi, archaea and nitrogen-cycling-associated microbes in an arable chernozem. In Proceedings of the 19th World Congress of Soil Science, Soil Solutions for a Changing World, Brisbane, Australia, 1–6 August 2010; pp. 25–28. [Google Scholar]
- Dimitrov, M.R.; Veraart, A.J.; de Hollander, M.; Smidt, H.; Van Veen, J.A.; Kuramae, E.E. Successive DNA extractions improve characterization of soil microbial communities. PeerJ 2017, 1, 1–29. [Google Scholar] [CrossRef]
- Aerts, J.W.; van Spanning, R.J.M.; Flahaut, J.; Molenaar, D.; Bland, P.A.; Genge, M.J.; Ehrenfreund, P.; Martins, Z. Microbial communities in sediments from four mildly acidic ephemeral salt lakes in the Yilgarn Craton (Australia)–Terrestrial Analogs to Ancient Mars. Front. Microbiol. 2019, 10, 1–19. [Google Scholar] [CrossRef]
- Fan, F.; Yu, B.; Wang, B.; George, T.S.; Yin, H.; Xu, D.; Li, D.; Song, A. Microbial mechanisms of the contrast residue decomposition and priming effect in soils with different organic and chemical fertilization histories. Soil Biol. Biochem. 2019, 135, 213–221. [Google Scholar] [CrossRef]
- Edgar, R.C. UPARSE: Highly accurate OTU sequences from microbial amplicon reads. Nat. Methods 2013, 10, 996–998. [Google Scholar] [CrossRef]
- Edgar, R.C.; Haas, B.J.; Clemente, J.C.; Quince, C.; Knight, R. UCHIME improves sensitivity and speed of chimera detection. Bioinformatics 2011, 27, 2194–2200. [Google Scholar] [CrossRef] [Green Version]
- Edgar, R.C. Search and clustering orders of magnitude faster than BLAST. Bioinformatics 2010, 26, 2460–2461. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Wang, Q.; Garrity, G.M.; Tiedje, J.M.; Cole, J.R. Naïve Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl. Environ. Microbiol. 2007, 73, 5261–5267. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Lin, W.; Lin, M.; Zhou, H.; Wu, H.; Li, Z.; Lin, W. The effects of chemical and organic fertilizer usage on rhizosphere soil in tea orchards. PLoS ONE 2019, 14, e0217018. [Google Scholar] [CrossRef] [PubMed]
- Whalley, W.R.; Riseley, B.; Leeds-Harrison, P.B.; Bird, N.R.A.; Leech, P.K.; Adderley, W.P. Structural differences between bulk and rhizosphere soil. Eur. J. Soil Sci. 2005, 56, 353–360. [Google Scholar] [CrossRef]
- Carminati, A.; Moradi, A.B.; Vetterlein, D.; Vontobel, P.; Lehmann, E.; Weller, U.; Vogel, H.-J.; Oswald, S.E. Dynamics of soil water content in the rhizosphere. Plant Soil 2010, 332, 163–176. [Google Scholar] [CrossRef]
- Zhalnina, K.; Dias, R.; de Quadros, P.D.; Mcgrath, S.P.; Hirsch, P.R.; Triplett, E.W. Soil pH determines microbial diversity and composition in the park grass experiment. Soil Microbiol. 2015, 63, 395–406. [Google Scholar] [CrossRef]
- Yang, F.; Wu, J.; Zhang, D.; Chen, Q.; Zhang, Q.; Cheng, X. Soil bacterial community composition and diversity in relation to edaphic properties and plant traits in grasslands of southern China. Appl. Soil Ecol. 2018, 128, 43–53. [Google Scholar] [CrossRef]
- Moreno-Espíndola, I.P.; Ferrara-Guerrero, M.J.; Luna-Guido, M.L.; Ramírez-Villanueva, D.A.; de León-Lorenzana, A.S.; Gómez-Acata, S.; González-Terreros, E.; Ramírez-Barajas, B.; Navarro-Noya, Y.E.; Sánchez-Rodríguez, L.M.; et al. The Bacterial community structure and microbial activity in a traditional organic milpamarming system under different soil moisture conditions. Front. Microbiol. 2018, 9, 1–19. [Google Scholar] [CrossRef]
- Caldwell, B.A. Enzyme activities as a component of soil biodiversity: A review. Pedobiologia 2005, 49, 637–644. [Google Scholar] [CrossRef]
- Shi, J.; Yuan, X.; Lin, H.; Yang, Y.; Li, Z. Differences in soil properties and bacterial communities between the rhizosphere and bulk soil and among different production areas of the medicinal plant fritillaria thunbergii. Int. J. Mol. Sci. 2011, 12, 3770–3785. [Google Scholar] [CrossRef] [PubMed]
- Ai, C.; Liang, G.; Sun, J.; Wang, X.; Zhou, W. Responses of extracellular enzyme activities and microbial community in both the rhizosphere and bulk soil to long-term fertilization practices in a fluvo-aquic soil. Geoderma 2012, 173–174, 330–338. [Google Scholar] [CrossRef]
- Chaudhary, D.R.; Gautam, R.K.; Yousuf, B.; Mishra, A.; Jha, B. Nutrients, microbial community structure and functional gene abundance of rhizosphere and bulk soils of halophytes. Appl. Soil Ecol. 2015, 91, 16–26. [Google Scholar] [CrossRef]
- Liang, G.; Cai, A.; Wu, H.; Wu, X.; Houssou, A.A.; Ren, C.; Wang, Z.; Gao, L.; Wang, B.; Li, S.; et al. Soil biochemical parameters in the rhizosphere contribute more to changes in soil respiration and its components than those in the bulk soil under nitrogen application in croplands. Plant Soil 2019, 435, 111–125. [Google Scholar] [CrossRef]
- Elsoury, H.A.; Shouman, A.E.; Elkony, H.M. Soil enzymes and microbial activity as influenced by tillage and fertilization in wheat production. Egypt J. Soil. Sci. 2015, 55, 53–65. [Google Scholar] [CrossRef] [Green Version]
- Zheng, W.; Gong, Q.; Zhao, Z.; Liu, J.; Zhai, B.; Wang, Z. Changes in the soil bacterial community structure and enzyme activities after intercrop mulch with cover crop for eight years in an orchard. Eur. J. Soil Biol. 2018, 86, 34–41. [Google Scholar] [CrossRef]
- Zhang, L.; Chen, W.; Burger, M.; Yang, L.; Gong, P.; Wu, Z. Changes in Soil Carbon and Enzyme Activity as a Result of Different Long-Term Fertilization Regimes in a Greenhouse Field. PLoS ONE 2015, 10, e0118371. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Guo, Q.; Yan, L.; Korpelainen, H.; Niinemets, Ü.; Li, C. Plant-plant interactions and N fertilization shape soil bacterial and fungal communities. Soil Biol. Biochem. 2019, 128, 127–138. [Google Scholar] [CrossRef]
- De Almeida, R.F.; Naves, E.R.; Pinheiro, R. Soil quality: Enzymatic activity of soil β -glucosidase. Glob. J. Agric. Res. Rev. 2015, 3, 146–150. [Google Scholar]
- Hojati, S.; Nourbakhsh, F. Distribution of β-glucosidase activity within aggregates of a soil amended with organic fertilizers. Am. J. Agric. Biol. Sci. 2009, 4, 179–186. [Google Scholar] [CrossRef] [Green Version]
- Soman, C.; Li, D.; Wander, M.M.; Kent, A.D. Long-term fertilizer and crop-rotation treatments differentially affect soil bacterial community structure. Plant Soil 2017, 413, 145–159. [Google Scholar] [CrossRef]
- Nelkner, J.; Henke, C.; Lin, T.W.; Pätzold, W.; Hassa, J.; Jaenicke, S.; Grosch, R.; Pühler, A.; Sczyrba, A.; Schlüter, A. Effect of long-term farming practices on agricultural soil microbiome members represented by metagenomically assembled genomes (MAGs) and their predicted plant-beneficial genes. Genes 2019, 10, 424. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Müller, O.; Wilson, B.; Paulsen, M.L.; Ruminska, A.; Armo, H.R.; Bratbak, G.; Øvreås, L. Spatiotemporal dynamics of ammonia-oxidizing Thaumarchaeota in Distinct Arctic water masses. Front. Microbiol. 2018, 9, 1–13. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- He, H.; Zhen, Y.; Mi, T.; Fu, L.; Yu, Z. Ammonia-oxidizing archaea and bacteria differentially contribute to ammonia oxidation in sediments from adjacent waters of Rushan Bay, China. Front. Microbiol. 2018, 9, 1–14. [Google Scholar] [CrossRef] [Green Version]
- Meena, M.; Swapnil, P.; Zehra, A.; Aamir, M.; Dubey, M.K.; Goutam, J.; Upadhyay, R.S. Beneficial microbes for disease suppression and plant growth promotion. In Plant-Microbe Interactions in Agro-Ecological Perspectives; Springer: Singapore, 2017; Volume 2, pp. 395–432. ISBN 9789811065934. [Google Scholar]
- Bulgarelli, D.; Schlaeppi, K.; Spaepen, S.; Ver, E.; van Themaat, L.; Schulze-lefert, P. Structure and functions of the bacterial microbiota of plants. Annu. Rev. Plant Biol. 2013, 64, 807–838. [Google Scholar] [CrossRef] [Green Version]
- Iffis, B.; St-Arnaud, M.; Hijri, M. Petroleum contamination and plant identity influence soil and root microbial communities while AMF spores retrieved from the same plants possess markedly different communities. Front. Plant Sci. 2017, 8, 1–16. [Google Scholar] [CrossRef] [PubMed]
Soil Properties ª | r | p |
---|---|---|
H2O | 1.0043 | 0.426 |
pH | 1.4796 | 0.040 * |
NH4+ | 1.3446 | 0.099 |
NO3− | 1.1714 | 0.225 |
AP | 0.8341 | 0.742 |
TN | 0.8708 | 0.660 |
0.9062 | 0.5 |
Soil Properties ª | r | p |
---|---|---|
H2O | 1.5873 | 0.094 |
pH | 1.2963 | 0.147 |
NH4+ | 2.1899 | 0.005 ** |
NO3− | 1.4649 | 0.069 |
AP | 1.2421 | 0.18 |
AK | 0.8398 | 0.66 |
TN | 0.8483 | 0.677 |
© 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
Share and Cite
Amadou, A.; Song, A.; Tang, Z.-X.; Li, Y.; Wang, E.-Z.; Lu, Y.-Q.; Liu, X.-D.; Yi, K.; Zhang, B.; Fan, F. The Effects of Organic and Mineral Fertilization on Soil Enzyme Activities and Bacterial Community in the Below- and Above-Ground Parts of Wheat. Agronomy 2020, 10, 1452. https://doi.org/10.3390/agronomy10101452
Amadou A, Song A, Tang Z-X, Li Y, Wang E-Z, Lu Y-Q, Liu X-D, Yi K, Zhang B, Fan F. The Effects of Organic and Mineral Fertilization on Soil Enzyme Activities and Bacterial Community in the Below- and Above-Ground Parts of Wheat. Agronomy. 2020; 10(10):1452. https://doi.org/10.3390/agronomy10101452
Chicago/Turabian StyleAmadou, Abdoulaye, Alin Song, Zhi-Xi Tang, Yanling Li, En-Zhao Wang, Yu-Qiu Lu, Xiong-Duo Liu, Keke Yi, Bin Zhang, and Fenliang Fan. 2020. "The Effects of Organic and Mineral Fertilization on Soil Enzyme Activities and Bacterial Community in the Below- and Above-Ground Parts of Wheat" Agronomy 10, no. 10: 1452. https://doi.org/10.3390/agronomy10101452