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Structural Characterization of Marine-Derived Compounds

A special issue of Molecules (ISSN 1420-3049). This special issue belongs to the section "Natural Products Chemistry".

Deadline for manuscript submissions: closed (30 November 2022) | Viewed by 1746

Special Issue Editors

School of Medicine and Pharmacy, Ocean University of China, Qingdao 266003, China
Interests: configuration; chiral; chromatography; molecular computerize
Special Issues, Collections and Topics in MDPI journals
School of Ocean Sciences, China University of Geosciences, Beijing 100190, China
Interests: marine; microorganism; natural products; antibacterial; drug development
Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, 130 Meilong Road, Shanghai 200237, China
Interests: marine natural products; synthetic biology; structural identification; natural pharmaceutical chemistry
Special Issues, Collections and Topics in MDPI journals

Special Issue Information

Dear Colleagues,

Organic molecules with chiral centers are commonly found in natural products research. Therefore, stereochemical elucidation of natural products is an important prerequisite for novel drug research and development. To date, many methods including general nuclear magnetic resonance parameters (NMR) spectroscopic experiment, chemical reactions, quantum chemical calculations, X-ray diffraction, and others or various combinations of these have been used to assign configurations of natural products. However, the configurations are still a challenge due to unstable conformations. Some compounds were not identified correctly. For example, some NOESY data could give a confused relationship because of the complex multiring system or more than one stable confirmation. Otherwise, there is a strong need for improving the configuration determination methods.

On the other hand, the configurations of the flexible structure are very difficult to achieve because of the special skeletons in which free rotation of the linear fragment due to C-C single bond generates much conformations and ultimately result in the difficulty of molecular configuration assignation. There are many trials to determine flexible structure configurations. However, except for chemical reactions and X-ray diffraction, these techniques are difficult to use for flexible molecules because they generate numerous complex and unpredictable conformations. Therefore, it is still a great challenge to accurately determine stereochemistry of flexible molecules, especially in the molecules with multiple chiral centers.

A correct configuration assignment of the right compound is crucial for the structure determination and related research. Additionally, it is an intriguing and state-of-the-art research topic.

Dr. Pinglin Li
Dr. Xiuli Xu
Dr. Faliang An
Guest Editors

Manuscript Submission Information

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Keywords

  • marine
  • natural products
  • bioassay
  • dereplication
  • structure characterization
  • drug development

Published Papers (1 paper)

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Review

28 pages, 5271 KiB  
Review
Genus Smenospongia: Untapped Treasure of Biometabolites—Biosynthesis, Synthesis, and Bioactivities
by Sabrin R. M. Ibrahim, Sana A. Fadil, Haifa A. Fadil, Rawan H. Hareeri, Hossam M. Abdallah and Gamal A. Mohamed
Molecules 2022, 27(18), 5969; https://doi.org/10.3390/molecules27185969 - 14 Sep 2022
Cited by 2 | Viewed by 1444
Abstract
Marine sponges continue to attract remarkable attention as one of the richest pools of bioactive metabolites in the marine environment. The genus Smenospongia (order Dictyoceratida, family Thorectidae) sponges can produce diverse classes of metabolites with unique and unusual chemical skeletons, including terpenoids (sesqui-, [...] Read more.
Marine sponges continue to attract remarkable attention as one of the richest pools of bioactive metabolites in the marine environment. The genus Smenospongia (order Dictyoceratida, family Thorectidae) sponges can produce diverse classes of metabolites with unique and unusual chemical skeletons, including terpenoids (sesqui-, di-, and sesterterpenoids), indole alkaloids, aplysinopsins, bisspiroimidazolidinones, chromenes, γ-pyrones, phenyl alkenes, naphthoquinones, and polyketides that possessed diversified bioactivities. This review provided an overview of the reported metabolites from Smenospongia sponges, including their biosynthesis, synthesis, and bioactivities in the period from 1980 to June 2022. The structural characteristics and diverse bioactivities of these metabolites could attract a great deal of attention from natural-product chemists and pharmaceuticals seeking to develop these metabolites into medicine for the treatment and prevention of certain health concerns. Full article
(This article belongs to the Special Issue Structural Characterization of Marine-Derived Compounds)
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