Next Article in Journal
The Effect of Sex and Obesity on the Gene Expression of Lipid Flippases in Adipose Tissue
Previous Article in Journal
Combination Therapy of 0.1% Fluorometholone and 0.05% Azelastine in Eyes with Severe Allergic Conjunctival Diseases: A Randomized Controlled Trial
 
 
Font Type:
Arial Georgia Verdana
Font Size:
Aa Aa Aa
Line Spacing:
Column Width:
Background:
Article

Galectin 3 (LGALS3) Gene Polymorphisms Are Associated with Biochemical Parameters and Primary Disease in Patients with End-Stage Renal Disease in Serbian Population

by
Zoran Kovacevic
1,†,
Tatjana Lazarevic
1,2,†,
Nela Maksimovic
3,
Milka Grk
3,
Vladislav Volarevic
4,5,
Marina Gazdic Jankovic
5,
Svetlana Djukic
2,6,
Katarina Janicijevic
7,
Marina Miletic Kovacevic
8,* and
Biljana Ljujic
5
1
Clinic of Nephrology, University Clinical Center, 34000 Kragujevac, Serbia
2
Faculty of Medical Sciences, Department of Internal Medicine, University of Kragujevac, 34000 Kragujevac, Serbia
3
Faculty of Medicine, Institute of Human Genetics, University of Belgrade, 11000 Belgrade, Serbia
4
Faculty of Medical Sciences, Department of Microbiology and Immunology, University of Kragujevac, 34000 Kragujevac, Serbia
5
Faculty of Medical Sciences, Department of Genetics, University of Kragujevac, 34000 Kragujevac, Serbia
6
Hematology Clinic, University Clinical Center, 34000 Kragujevac, Serbia
7
Faculty of Medical Sciences, Department of Social Medicine, University of Kragujevac, 34000 Kragujevac, Serbia
8
Faculty of Medical Sciences, Department of Histology and Embryology, University of Kragujevac, 34000 Kragujevac, Serbia
*
Author to whom correspondence should be addressed.
These authors contributed equally to this work.
J. Clin. Med. 2022, 11(13), 3874; https://doi.org/10.3390/jcm11133874
Submission received: 26 May 2022 / Revised: 16 June 2022 / Accepted: 22 June 2022 / Published: 4 July 2022
(This article belongs to the Section Nephrology & Urology)

Abstract

:
Galectin 3 plays a significant role in the development of chronic renal failure, particularly end-stage renal disease (ESRD). The aim of our study was to investigate the association between Gal-3 and biochemical parameters and primary disease in ESRD patients, by exploring the polymorphisms LGALS3 rs4644, rs4652, and rs11125. A total of 108 ESRD patients and 38 healthy controls were enrolled in the study. Genotyping of LGALS3 gene rs4644, rs4652, and rs11125 polymorphisms was performed by polymerase chain reaction–restriction fragment length polymorphism (PCR–RFLP). By multivariate logistic regression analysis, we found that LGALS3 rs4644 CC and rs4652 AA genotypes were significantly associated with a higher risk for lower hemoglobin, higher level of parathyroid hormone, and also occurrence of diabetes mellitus and arterial hypertension. The CAA haplotype was significantly more common in patients with diabetes, low hemoglobin level, and normal PTH level. It has been observed as well that the ACT haplotype was more common in patients with low glomerular filtration, low PTH, and normal hemoglobin level. We found that the LGALS3 rs4644 and rs4652 gene polymorphism may be involved in the pathogenesis and appearance of complications in ESRD patients and thus could be considered a new genetic risk factor in this population.

1. Introduction

Chronic kidney disease (CKD) is a major health problem worldwide. The last stage of CKD is end-stage renal disease (ESRD), which is characterized by a progressive decrease in glomerular filtration rate (GFR). End-stage renal failure is often complicated by anemia, uremic cardiomyopathy, and renal osteodystrophy, which can be fatal [1]. Therefore, it is necessary to identify the risk factors that can lead to ESRD or death. In addition to well-defined early markers such as diabetes, hypertension, and obesity, it is necessary to identify other markers that would help in the prediction of the disease. It has been shown that genetic factors also have an influence on renal function, pathogenesis, and disease progression, which is confirmed by the results of genome-wide association studies (GWASs). The results of GWASs show that glomerular filtration rate and renal function are affected by several gene loci [2].
Galectin 3 (Gal-3) is the only representative chimera type of the galectin family, which forms a pentameric structure on the cell surface after binding to glycoproteins or glycolipids [3]. The results of numerous studies have shown that Gal-3 plays a significant role in fibrosis, inflammation, and proliferation [4,5,6]. Increased circulating levels of Gal-3 have been associated with various diseases, including cancer, immunological disorders, and cardiovascular disease [7]. There are two single-nucleotide polymorphism (SNP) sites located at chromosome 14 in exon 3 of LGALS3 which are most common, marked as rs4644 and rs4652 variants. The variant of rs4644 + 191 C > A substitutes histidine to proline at residue 64, whereas the variant of rs4652 + 292 A > C changes threonine at residue 98 to proline [8]. The results of the study showed the bilateral roles of different variants of Gal-3 in different types of malignancies. Previous studies concluded that genetic variants at two Gal-3 gene single-nucleotide polymorphism (SNP) sites are able to change the protein levels of Gal-3 [7]. In patients with acute heart failure, a single-time-point-based measurement of plasma Gal-3 concentration and the severity of myocardial fibrosis are both predictors for the composite outcome of all-cause mortality and rehospitalization at 1-year follow-up. However, no association is found between the polymorphisms of the Gal-3-coding gene (rs4644 and rs4652), plasma Gal-3 concentration, and the degree of myocardial fibrosis [9]. Contrarily, the genotype of rs4644 might be associated with lower left ventricular ejection fraction in patients with dilated cardiomyopathy [10].
Gal-3 plays a significant role in acute renal failure as well as in the development of chronic renal failure. Animal model studies have suggested that Gal-3 expressions were markedly upregulated in both ischemic and toxic types in acute renal failure, and play an important role in acute tubular injury and the following regeneration stage [11]. The results of the meta-analysis suggest that high levels of Gal-3 may increase the risk of all-cause mortality and cardiovascular events in patients with CKD; however, it is probably not a sensitive biomarker for outcomes in hemodialysis patients [12]. Additionally, the results of a clinical study showed that plasma Gal-3 levels were associated with renal insufficiency and poorer survival in patients with chronic systolic heart failure, but they did not record a relationship between Gal-3 and echocardiographic or hemodynamic indices [13]. Additionally, higher levels of Gal-3 correlate with an increased risk of CKD incidents in the general population and are strongly associated with a rapid loss of renal function during 10-year follow-up. No association was observed between the albuminuria level and the serum Gal-3 level [14]. These data suggest that Gal-3 may identify individuals at risk for the development of CKD many years before clinical onset. There are also several small studies that have examined the role of Gal-3 in patients with end-stage renal disease. A study conducted by Mejires et al. showed that urinary Gal-3 levels were not increased in patients with heart failure, despite significantly increased plasma Gal-3 levels [15]. In the multivariable Cox proportional hazard model, Gal-3 levels above the cut-off value remained an independent predictor of all-cause mortality, suggesting that Gal-3 is an independent predictor of mortality in hemodialysis patients [16].
The Gal-3 level has been considered as relevant to various disease treatments by some studies because they play an important role in inflammation and fibrosis process. However, the relationship between the SNPs in the Gal-3 gene and the phenotypic variations in CKD has not been evaluated. However, there is currently no study specifically examining the correlation of Gal-3 gene polymorphisms with the risk and prognosis of ESRD. Therefore, the present study intends to explore the relationship between Gal-3 and biochemical parameters and primary disease in ESRD patients by exploring the polymorphisms LGALS3 rs4644, rs4652, and rs11125. This may reveal a new aspect of prognosis and treatment in the future.

2. Material and Methods

2.1. Ethics Statement

All individuals participating in the study provided written informed consent and blood samples were collected under protocols approved by The Ethics Committee of the Clinical Centre of Kragujevac, Serbia (No. 01/20-859, Date 4 December 2020). The study included patients with chronic kidney disease (CKD) from central Serbia, diagnosed and treated at the Clinic of Nephrology and Center of Hemodialysis, Clinical Center of Kragujevac, Serbia. In addition to the genotyping studies, peripheral blood samples were also used to determine standard biochemical parameters relevant for CKD. Furthermore, blood samples from healthy volunteers were also collected. The study was performed in accordance with the Declaration of Helsinki.

2.2. Study Population

The study included 108 patients with end-stage renal disease (ESRD) and 38 healthy volunteers matched for age and sex. All patients had a reduced glomerular filtration rate (GFR <10 mL/min/1.73 m2). In total, there were 58.3% men and 41.7% women suffering from ESRD. Healthy controls were 73.7% men and 26.3% women.

2.3. Molecular Genetics Methods

Molecular genetic analyses were performed at the Institute of Human Genetics, Faculty of Medicine, University of Belgrade. Genomic DNA was isolated from 5 mL of patients’ peripheral blood with solution-based DNA extraction methods using salting out [17]. Genotypes of LGALS3 gene rs4644, rs4652, and rs11125 polymorphisms for each patient were determined by real-time PCR method, using TaqMan probes (TaqMan® SNP Genotyping Assays), C___7593635_1_, C___7593636_30, and C___7593637_10, respectively. All reactions were conducted in Real-time PCR machine ABI7500 Real-time system (Applied Biosystems, Foster, CA, USA)

2.4. Statistical Analysis

For the comparison of means of the different clinical parameters, between cases and controls, the Mann–Whitney test was used. For the analysis of the pathologies associated with CKD, the Fisher test was performed. The observed genotype frequencies in controls were tested for Hardy–Weinberg equilibrium using the chi-square test. Odds ratios (OR) and 95% confidence intervals (95% CI) for associations between genotypes and CKD, associated phenotypes, and clinical parameters converted to binary variables were estimated by logistic regression while linear regression was used for continuous variables. The analyses were carried out considering two models, one without adjustment and a second adjusting for age and gender. Statistical significance was determined by a p-value lower than 0.05. Statistical analyses were performed in SPSS program version 16.0 (SPSS Inc, Chicago, IL, USA), using appropriate statistical methods. Haplotype analysis was performed using HaploView 4.2 software. Haplotype blocks were assessed by the “Confidence Intervals LD” method [18].

3. Results

3.1. General Characteristic

The demographic, clinical, and biochemical characteristics of the studied patients are summarized in Table 1. The mean age of the ESRD patients (63 males, 45 females) included was 63.05 ± 11.74 years with the mean duration of dialysis at 5.68 ± 5.23 years. The mean age of the 38 healthy controls (28 males, 10 females) was 53.5 ±15.5 years.

3.2. Genetic Association Study

Frequencies of alleles and genotypes of the analyzed Gal-3 gene polymorphisms were compared between ESRD patients and controls, and are summarized in Table 2. There was no significant difference between the allele frequency of Gal-3 polymorphisms in the ESRD patients and control subjects (p > 0.05). Additionally, haplotype analysis of LGALS3 genes (rs4644, rs4652 and rs11125) was performed. The values of D’ (normalized LD coefficient) and r2 (correlation coefficient) are shown in Figure 1. The analysis showed that a haplotypic block was present between the three examined polymorphisms (rs4644, rs4652, and rs11125). The frequency of haplotypes present in patients is shown in Figure 2.

3.3. Galectin 3 Gene Polymorphisms Associated with Clinical/Biochemical Parameters

ESRD patients are characterized by a defined biochemical profile acting as a clinical indicator. The obtained results are shown in Table 3. As indicated, three biochemical parameters showed statistical association with the defined Gal-3 gene polymorphisms: hemoglobin, glomerular filtration rate, and parathyroid hormone. Moreover, ESRD patients with LGALS3 rs4644 CC (p = 0.034; OR = 4.83; CI 1.12–20.82) and rs4652 AA (p = 0.019; OR =2.86; CI 1.26–6.5) genotypes had 5 and 3 times, respectively, higher risk for lower hemoglobin (˂103 g/L). Additionally, binary logistic regression showed that low glomerular filtration depends on the LGALS3 rs11125 genotype. Moreover, ESRD patients with the LGALS3 rs11125 AA genotype have about four-times-higher risk of low filtration (p = 0.018; OR = 3.73; CI 1.33–10.5). Furthermore, ESRD patients with LGALS3 rs4644 CA or AA (p = 0.003; OR = 3.52; CI 1.58–7.88) and rs4652 AC or CC (p = 0.003; OR = 3.63; CI 1.60–8.23) genotypes had about 3.5 times, respectively, more risk for higher level of parathyroid hormone (>151.1 pg/mL). For other biochemical parameters, we did not detect risk association with LGALS3 genotypes.

3.4. Comparison of Gal-3 Gene Polymorphisms between ESRD Patients with Different Type of Primary Disease

Upon estimation of the risk association between LGALS3 genotypes and clinical complications, we studied the potential correlation between LGALS3 genotypes and primary diseases (Table 4). Moreover, binary logistic regression showed that patients who had LGALS3 rs4644 CC and rs4652 AA genotypes had 3.2- and 10-times-higher risk, respectively, of developing diabetes mellitus (p = 0.018; OR = 3.27; CI 1.30–8.60 and p = 0.017; OR = 3.27; CI 1.32–8.13, respectively). Additionally, binary logistic regression showed that patients with LGALS3 rs4644 AA genotype had 6.5-times-higher risk of developing hypertension (p = 0.013; OR = 6.46; CI 1.34–31.13). There was no risk association between different type of primary disease and LGALS3 rs11125 genotypes (p > 0.05).

3.5. Frequency of Haplotypes According to Clinical and Biochemical Parameters of ESRD Patients

The CAA haplotype was significantly more common in patients with diabetes (0.796 vs. 0.570; p = 0.0029), while the ACA haplotype was more common in patients without diabetes (0.259 vs. 0.093; p = 0.0102). Additionally, the CAA haplotype was protective against hypertension (0.691 vs. 0.559; p = 0.0469). It has been observed as well that the ACT haplotype was more common in patients with low glomerular filtration (0.167 vs. 0.064; p = 0.018). Among patients with normal PTH levels, the CAA haplotype was more frequent than among patients with lower PTH (0.708 vs. 0.547; p = 0.0157), while the ACT haplotype was significantly more frequent in patients with low PTH (0.160 vs. 0.066; p = 0.0302). Regarding the hemoglobin levels, the CAA haplotype was more common in patients with low hemoglobin levels than in patients with normal hemoglobin levels (0.704 vs. 0.547; p = 0.0209), while the ACT haplotype was more frequent in patients with normal hemoglobin (0.160 vs. 0.071; p = 0.0488) (Table 5).

4. Discussion

The multifactorial etiology of ESRD is well-documented in the previously published literature. In addition, a number of environmental factors, several mutations, and genetic variants were reported to have an association with kidney diseases [19,20,21,22]. In the present study, we investigated for the first time the three SNP polymorphisms of the LGALS3 gene and its correlation with hemoglobin levels, rate of glomerular filtration, level of parathyroid hormone, diabetes mellitus, and arterial hypertension. First, our findings showed that ESRD patients with the LGALS3 rs4644 CC and rs4652 AA genotypes and also the CAA haplotype had a higher risk for lower hemoglobin and lower PTH level, and occurrence of diabetes mellitus and arterial hypertension. A recent study indicated that two LGALS3 gene single-nucleotide polymorphisms (SNPs) (rs4644 and rs4652) are associated with changes in protein levels [7] and may alter the circulating Gal-3 content, but less is known about these genetic variations in relation to CKD or ESRD. However, some limitations should be taken into account when determining serum Gal-3 levels. Namely, repeated measurements at multiple time points can provide better information on the risk of later clinical outcomes. Additionally, genetic variations of rs4644 may affect test results. The variant of rs4652 is associated with Gal-3 expression level, and it was proven that when allele A is changed to C, rs4652 changes threonine to a proline at residue 98, resulting in irregular Gal-3 secretion [23].
During a sixteen-year study conducted by Rebholz et al., it was shown that elevated serum Gal-3 values were significantly associated with early and late stages of incident kidney disease in a diverse population with preserved kidney function and without heart failure, particularly among those with hypertension [24].
Our findings are in line with the above study that ESRD patients with rs4644 CC genotypes had a higher risk of occurrence of arterial hypertension with the evidence that individuals with hypertension appeared to be particularly susceptible to the risk of incident CKD in association with elevated Gal-3 levels [24].
Additionally, a recently published study demonstrated that Gal-3 levels, but not LGALS3 genotypes, were associated with multiple inflammatory marker levels in patients with coronary artery disease. They showed that the A variant of LGALS3 rs4644 genotypes and the C variant of LGALS3 4652 genotypes were associated with relatively low Gal-3 levels [25]. Moreover, the data showed that patients who have LGALS3 rs4652 pulmonary arterial hypertension and myopathy as predictor variables were statistically significant. Additionally, a decline was observed in the Gal-3 values for the LGALS3 rs4652 A/A, A/C, and C/C genotypes.
Examination of the relationship between biochemical parameters and polymorphisms of the Gal-3 gene showed that ESRD patients with rs4644 CC and rs4652 AA genotypes had 5 and 3 times, respectively, more risk for lower hemoglobin and 3- and 4-times more risk for a lower level of parathyroid hormone.
Both major alleles in rs4644 and rs4652 are in relation with high serum levels of Gal-3, since it is clearly shown that serum Gal-3 level was significantly increased in diabetic and prediabetic patients in comparison to the control group [26]. Therefore, in the continuation of our research, we examined the correlation of these two polymorphisms with the occurrence of diabetes in our population. In accordance with their finding, our results showed that patients who had LGALS3 rs4644 CC and rs4652 AA genotypes had a 3.2- and 10-times-higher risk of developing diabetes mellitus.

5. Conclusions

In summary, LGALS3 rs4644 CC and rs4652 AA genotypes were significantly associated with a higher risk for lower hemoglobin, higher level of parathyroid hormone, and also occurrence of diabetes mellitus and arterial hypertension. Determining SNP polymorphisms of the LGALS3 rs4644 CC and rs4652 AA genotypes may be useful for identifying ESRD patients with poor prognosis, especially for diabetes mellitus and arterial hypertension. Gal-3 may be a target for pharmacotherapy to prevent progression and complications in ESRD patients.

6. Limitation of the Study

The first limitation of this study is its modest sample size. Replication of this investigation using a larger sample cohort would improve the strength of the analysis. Second, having in mind that all the patients in the study were ethnically Serbian, caution should be exercised when extrapolating our results to individuals of other ethnicities.

Author Contributions

Z.K. and T.L. designed the study and collected data; N.M. and M.G. conducted molecular genetic analysis; V.V., M.G.J. and B.L. analyzed the data; S.D., K.J. and B.L. aided in interpreting the results. The corresponding authors M.M.K. made all figures and revised the final version of the manuscript. All authors have read and agreed to the published version of the manuscript.

Funding

This study was supported by the Ministry of Education, Science and Technological Development of the Republic of Serbia (Agreement No. 175103; Agreement No. 451-03-68/2020-14/200107 and Agreement No. 451-03-9/2021-14/200378) and by the Faculty of Medical Sciences, University of Kragujevac, Serbia (JP 25/19; JP 06/20 and JP 24/20).

Institutional Review Board Statement

The study was conducted in accordance with the Declaration of Helsinki, and the protocol was approved by the Ethics Committee of the Clinical Centre of Kragujevac, Serbia (No. 01/20-859, Date 4 December 2020).

Informed Consent Statement

Written informed consent was obtained from patients providing samples.

Data Availability Statement

Not applicable.

Conflicts of Interest

The authors declare no conflict of interest.

References

  1. Lo, L.J.; Go, A.S.; Chertow, G.M.; McCulloch, C.E.; Fan, D.; Ordonez, J.D.; Hsu, C.Y. Dialysis-requiring acute renal failure increases the risk of progressive chronic kidney disease. Kidney Int. 2009, 76, 893–899. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  2. O’Seaghdha, C.M.; Fox, C.S. Genome-wide association studies of chronic kidney disease: What have we learned? Nat. Rev. Nephrol. 2011, 8, 89–99. [Google Scholar] [CrossRef] [Green Version]
  3. Leffler, H.; Carlsson, S.; Hedlund, M.; Qian, Y.; Poirier, F. Introduction to galectins. Glycoconj. J. 2004, 19, 433–440. [Google Scholar] [CrossRef] [PubMed]
  4. Yang, R.Y.; Rabinovich, G.A.; Liu, F.T. Galectins: Structure, function and therapeutic potential. Expert. Rev. Mol. Med. 2008, 10, e17. [Google Scholar] [CrossRef]
  5. Dumic, J.; Dabelic, S.; Flogel, M. Galectin-3: An open-ended story. Biochim. Biophys. Acta. 2006, 1760, 616–635. [Google Scholar] [CrossRef]
  6. de Boer, R.A.; Voors, A.A.; Muntendam, P.; van Gilst, W.H.; van Veldhuisen, D.J. Galectin-3: A novel mediator of heart failure development and progression. Eur. J. Heart Fail. 2009, 11, 811–817. [Google Scholar] [CrossRef]
  7. De Boer, R.A.; Verweij, N.; van Veldhuisen, D.J.; Westra, H.J.; Bakker, S.J.; Gansevoort, R.T.; Kobold, A.C.; van Gilst, W.H.; Franke, L.; Leach, I.M.; et al. A genome-wide association study of circulating galectin-3. PLoS ONE 2012, 7, e47385. [Google Scholar] [CrossRef] [Green Version]
  8. Đorđevic, A.; Dekleva, M.; Živković, M.; Stanković, A.; Marković-Nikolić, N.; Alavantić, D.; Đurić, T. Left ventricular remodeling after the first myocardial infarction in association with LGALS-3 neighbouring variants rs2274273 and rs17128183 and its relative mRNA expression: A prospective study. Mol. Biol. Rep. 2018, 45, 2227–2236. [Google Scholar]
  9. Fu, H.; Nie, S.; Luo, P.; Ruan, Y.; Zhang, Z.; Miao, H.; Li, X.; Wen, S.; Bai, R. Galectin-3 and acute heart failure: Genetic polymorphisms, plasma level, myocardial fibrosis and 1-year outcomes. Biomark. Med. 2020, 14, 943–954. [Google Scholar] [CrossRef] [PubMed]
  10. Zhang, Y.; Wang, Y.; Zhai, M.; Gan, T.; Zhao, X.; Zhang, R.; An, T.; Huang, Y.; Zhou, Q.; Zhang, J. Influence of LGALS3 gene polymorphisms on susceptibility and prognosis of dilated cardiomyopathy in a Northern Han Chinese population. Gene 2018, 642, 293–298. [Google Scholar] [CrossRef] [PubMed]
  11. Nishiyama, J.; Kobayashi, S.; Ishida, A.; Nakabayashi, I.; Tajima, O.; Miura, S.; Katayama, M.; Nogami, H. Up-regulation of galectin-3 in acute renal failure of the rat. Am. J. Pathol. 2000, 157, 815–823. [Google Scholar] [CrossRef] [Green Version]
  12. Zhang, T.; Cao, S.; Yang, H.; Li, J. Prognostic impact of galectin-3 in chronic kidney disease patients: A systematic review and meta-analysis. Int. Urol. Nephrol. 2019, 51, 1005–1011. [Google Scholar] [CrossRef] [PubMed]
  13. Tang, W.H.; Shrestha, K.; Shao, Z.; Borowski, A.G.; Troughton, R.W.; Thomas, J.D.; Klein, A.L. Usefulness of plasma galectin-3 levels in systolic heart failure to predict renal insufficiency and survival. Am. J. Cardiol. 2011, 108, 385–390. [Google Scholar] [CrossRef] [Green Version]
  14. O’Seaghdha, C.M.; Hwang, S.J.; Ho, J.E.; Vasan, R.S.; Levy, D.; Fox, C.S. Elevated galectin-3 precedes the development of CKD. J. Am. Soc. Nephrol. 2013, 24, 1470–1477. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  15. Meijers, W.C.; van der Velde, A.R.; Ruifrok, W.P.; Schroten, N.F.; Dokter, M.M.; Damman, K.; Assa, S.; Franssen, C.F.; Gansevoort, R.T.; van Gilst, W.H.; et al. Renal handling of galectin-3 in the general population, chronic heart failure, and hemodialysis. J. Am. Heart Assoc. 2014, 3, e000962. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  16. Hogas, S.; Schiller, A.; Voroneanu, L.; Constantinescu, D.; Timar, R.; Cianga, P.; Covic, A. Predictive Value for Galectin 3 and Cardiotrophin 1 in Hemodialysis Patients. Angiology 2016, 67, 854–859. [Google Scholar] [CrossRef]
  17. Miller, S.A.; Dykes, D.D.; Polesky, H.F. A simple salting out procedure for extracting DNA from human nucleated cells. Nucleic. Acids. Res. 1988, 16, 1215. [Google Scholar] [CrossRef] [Green Version]
  18. Barrett, J.C.; Fry, B.; Maller, J.; Daly, M.J. Haploview: Analysis and visualization of LD and haplotype maps. Bioinformatics 2005, 21, 263–265. [Google Scholar] [CrossRef] [Green Version]
  19. Gregorio, T.O.; Ulla, T.S.; Matthias, K.; Robyn, G.H.; Nangaku, M.; Pecoits-Filho, R.; Pollock, C.; Rossert, J.; Correa-Rotter, R.; Stenvinkel, S.; et al. Genetic and environmental risk factors for chronic kidney disease. Kidney Int. Suppl. 2017, 7, 88–106. [Google Scholar]
  20. Linda, W.H.; Klag, M.J.; Meoni, I.A.; Reich, D.; Berthier-Schaad, Y.; Li, M.; Coresh, J.; Patterson, N.; Tandon, A.; Powe, N.R.; et al. MYH9 is associated with nondiabetic end-stage reanl disease in African Americans. Nat. Genet. 2008, 40, 1185–1192. [Google Scholar]
  21. Cheryl, A.W.; George, N.; Taras, K.O.; Nava, M.B.; Kopp, J.B. Genetics of focal segmental glomerulosclerosis and HIV-associated collapsing glomerulophathy: The role of MYH9 genetic variantion. Semin. Nephrol. 2010, 30, 111–125. [Google Scholar]
  22. Barry, I.F.; Pamela, J.H.; Meredith, A.B.; Cunningham, M.E.; Liu, Y.; Divers, J.; Kopp, J.B.; Winkler, C.A.; Nelson, G.W.; Langefeld, C.D.; et al. Polymorphisms in the non-muscle myosin heavy chain 9 gene (MYH9) are strongly associated with end-stage renal disease historically attributed to hypertension in African Americans. Kidney Int. 2009, 75, 736–745. [Google Scholar]
  23. Hu, C.Y.; Chang, S.K.; Wu, C.S.; Tsai, W.I.; Hsu, P.N. Galectin-3 gene (LGALS3) +292C allele is a genetic predisposition factor for rheumatoid arthritis in Taiwan. Clin. Rheumatol. 2011, 30, 1227–1233. [Google Scholar] [CrossRef] [PubMed]
  24. Rebholz, C.M.; Selvin, E.; Liang, M.; Ballantyne, C.M.; Hoogeveen, R.C.; Aguilar, D.; McEvoy, J.W.; Grams, M.E.; Coresh, J. Plasma galectin-3 levels are associated with the risk of incident chronic kidney disease. Kidney Int. 2017, 93, 252–259. [Google Scholar] [CrossRef] [Green Version]
  25. Liao, Y.H.; Teng, M.S.; Juang, J.J.; Chiang, F.T.; Er, L.K.; Wu, S.; Ko, Y.L. Genetic determinants of circulating galectin-3 levels in patients with coronary artery disease. Mol. Genet. Genomic. Med. 2020, 8, e1370. [Google Scholar] [CrossRef] [PubMed]
  26. Yilmaz, H.; Cakmak, M.; Inan, O.; Darcin, T.; Akcay, A. Increased levels of galectin-3 were associated with prediabetes and diabetes: New risk factor? J. Endocrinol. Investig. 2015, 38, 527–533. [Google Scholar] [CrossRef]
Figure 1. Schematic representation of LD with values of D’ (A) and r2 (B) among the analyzed polymorphisms of LGALS3 genes (rs4644, rs4652, and rs11125) in patients with renal disease. (A) Intense red color indicates a value of D’ = 100 for LOD values > 2. The decrease in the intensity of red is proportional to the decrease in the value of D’. (B) The black color is present at the value r2 = 100. The intensity of the gray color is proportional to the values of r2, where the white color corresponds to the value of r2 = 0.
Figure 1. Schematic representation of LD with values of D’ (A) and r2 (B) among the analyzed polymorphisms of LGALS3 genes (rs4644, rs4652, and rs11125) in patients with renal disease. (A) Intense red color indicates a value of D’ = 100 for LOD values > 2. The decrease in the intensity of red is proportional to the decrease in the value of D’. (B) The black color is present at the value r2 = 100. The intensity of the gray color is proportional to the values of r2, where the white color corresponds to the value of r2 = 0.
Jcm 11 03874 g001
Figure 2. Frequency of haplotypes present in patients.
Figure 2. Frequency of haplotypes present in patients.
Jcm 11 03874 g002
Table 1. Demographic, clinical, and biochemical characteristics of ESRD patients included in the study.
Table 1. Demographic, clinical, and biochemical characteristics of ESRD patients included in the study.
VariablesNormal ValueMean ± Standard Deviation
Age (years)>1863.05 ± 11.74
Length of hemodialysis treatment>6 months5.68 ± 5.23 years
Gender men/women63/45
Leukocytes(3.70–10.0 × 109/L)7.22 ± 3.46
Erythrocytes(3.86–5.08 × 10¹²/L)3.74 ± 1.23
Hemoglobin(110–157 g/L)102.90 ± 12.32
Platelets(135–450 × 109/L)183.86 ± 64.03
Iron(6.6–26.0 μmol/L)10.78 ± 5.26
Sodium(136–145 mmol/L)138.72 ± 2.98
Potassium(3.4–4.5 mmol/L)5.24 ± 0.82
Calcium(2.02–2.65 mmol/L)2.27 ± 0.20
Phosphorus(0.80–1.60 mmol/L)1.53 ± 0.49
Magnesium(0.70–1.10 mmol/L)1.16 ± 0.26
Parathyroid hormone(120–300 pg/mL)234.94 ± 271.53
Albumin(35–52 g/L)36.96 ± 3.26
Urea before hemodialysis(3.0–8.0 mmol/L)21.45± 5.06
Urea after hemodialysis(3.0–8.0 mmol/L)7.59 ±2.93
Creatinine before hemodialysis(49–106 μmol/L)772.59 ± 512.59
Creatinine after hemodialysis(49–106 μmol/L)324.36 ± 106.99
NTproBNP before hemodialysis(≥7200 pg/mL)17,491.20 ± 34,341.10
NTproBNP after hemodialysis(≥7200 pg/mL)14,575.93 ± 34,478.69
Troponin before hemodialysismen ≤ 0.03
woman ≤ 0.01
0.02 ± 0.01
Troponin after hemodialysismen ≤ 0.03
woman ≤ 0.01
0.02 ± 0.01
Glomerular filtration rate0–15 mL/min10.94 ± 3.37
Continuous variables are presented as mean ± SD. ESRD, end-stage renal disease; NTproBNP, N-terminal proBrain Natriuretic Peptide.
Table 2. Allele frequency of Galectin 3 polymorphisms in ESRD patients and control subjects.
Table 2. Allele frequency of Galectin 3 polymorphisms in ESRD patients and control subjects.
Galectin 3 PolymorphismControls
n = Number
(%)
ESRD Patients
n = Number
(%)
p Value
rs4644
CC16 (42.1)48 (45.3)0.540
CA15 (39.5)46 (43.4)
AA7 (18.4)12 (11.3)
rs4452
AA16 (42.1)44 (41.5)0.299
AC12 (31.6)45 (42.5)
CC10 (26.3)17 (16)
rs11125
AA30 (78.9)84 (79.2)0.675
AT8 (21.1)20 (18.9)
TT0 (0)2 (1.9)
ESRD, end-stage renal disease.
Table 3. Biochemical characteristics of hemodialyzed patients classified according to the Galectin 3 gene polymorphisms.
Table 3. Biochemical characteristics of hemodialyzed patients classified according to the Galectin 3 gene polymorphisms.
Clinical Parameters
(Normal Values)
(Cut-Off Value)
SNPGenotypeGroup 1 *
n (%)
Group 2 **
n (%)
OR; (95% CI)p Value
Hemoglobin
(110–157 g/L)
(˂103 g/L) **
rs4644CC16 (30.2)29 (59.2)3.35; (1.48–7.60)0.006
CA + AA37 (69.8)20 (20.8)
rs4652AA15 (28.3)26 (53.1)2.86; (1.26–6.5)0.019
CA + CC38 (71.7)23 (46.9)
rs11125AA38 (71.7)42 (85.7)2.37; (0.87–6.43)0.138
AT + TT15 (28.3)7 (14.3)
Glomerular filtration rate
(≤15 mL/min/1.75 m2)
(˂11 mL/min/1.75 m2) **
rs4644CC22 (43.1)26 (47.3)1.18; (0.55–2.54)0.823
CA + AA29 (56.9)29 (52.7)
rs4652AA20 (39.2)24 (43.6)1.2; (0.55–2.60)0.791
AC + CC31 (60.8)31 (56.4)
rs11125AA35 (68.6)49 (89.1)3.73; (1.33–10.5)0.018
AT + TT16 (31.4)6 (10.9)
Parathyroid hormone
(120–300 pg/mL) (>151.1 pg/mL) **
rs4644CC32 (60.4)16 (30.2)3.52; (1.58–7.88)0.003
CA + AA21 (39.6)37 (69.8)
rs4652AA30 (56.6)14 (26.4)3.63; (1.60–8.23)0.003
AC + CC23 (43.4)39 (73.6)
rs11125AA46 (86.8)38 (71.7)2.59; (0.96–7.01)0.090
AT + TT7 (13.2)15 (28.3)
SNP, single-nucleotide polymorphism; OR, odds ratios; CI, confidence intervals; Group 1 * Low risk; Group 2 ** High risk.
Table 4. The frequency distribution and risk association of Galectin 3 genotypes and alleles among the studied groups.
Table 4. The frequency distribution and risk association of Galectin 3 genotypes and alleles among the studied groups.
Clinical ParametersSNPGenotypeNo
n (%)
Yes
n (%)
OR; (95% CI)p Value
Diabetes mellitusrs4644CC30 (38.0)18 (66.7)3.27; (1.30–8.60)0.018
CA + AA49 (69.8)9 (20.8)
rs4652AA27 (34.2)17 (63.0)3.27; (1.32–8.13)0.017
CA + CC52 (65.8)10 (37.0)
rs11125AA61 (77.2)23 (85.2) 0.543
AT + TT18 (22.8)4 (14.8)
Hypertensionrs4644CC + CA53 (96.4)41 (80.4)6.46; (1.34–31.13)0.013
AA2 (3.6)10 (19.6)
rs4652AA + AC50 (90.9)39 (76.5) 0.078
CC5 (9.01)12 (23.5)
rs11125AA46 (83.6)38 (74.5) 0.359
AT + TT9 (16.4)13 (25.5)
Polycystic kidney diseasers4644CC39 (50.0)9 (32.1) 0.159
CA + AA39 (50.0)19 (67.8)
rs4652AA35 (44.9)9 (32.1) 0.342
AC + CC43 (55.1)19 (67.9)
rs11125AA61 (78.2)23 (82.1) 0.862
AT + TT17 (21.8)5 (17.9)
SNP, single-nucleotide polymorphism; OR, odds ratios; CI, confidence intervals.
Table 5. Frequency of haplotypes according to clinical and biochemical parameters of ESRD patients.
Table 5. Frequency of haplotypes according to clinical and biochemical parameters of ESRD patients.
HaploypesWith DMWithout DMpWith HTAWithout HTApLow
GFR
Normal GFRpHigh PTHNormal PTHpNormal HgbLow
Hgb
pPKD
No
PKD
Yes
p
CAA0.7960.5700.0030.5590.6910.0470.6360.6180.7780.5470.7080.0160.5470.7040.0210.6410.5930.492
ACA0.0930.2590.0100.2550.1820.1970.2450.1860.2960.2450.1890.3170.2640.1630.0800.1990.2590.282
ACT0.0740.1270.2930.1370.0910.2870.0640.1670.0180.1600.0660.0300.1600.0710.0490.1150.1110.867
CCA0.0370.0440.8190.0490.0360.6480.0550.0290.3640.0470.0380.7330.0280.0610.2530.0450.0370.771
ESRD, end-stage renal disease; DM, diabetes mellitus; PKD, polycystic kidney disease; GFR, glomerular filtration rate; PTH, parathyroid hormone; Hgb, hemoglobin; HTA, hypertension.
Publisher’s Note: MDPI stays neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Share and Cite

MDPI and ACS Style

Kovacevic, Z.; Lazarevic, T.; Maksimovic, N.; Grk, M.; Volarevic, V.; Gazdic Jankovic, M.; Djukic, S.; Janicijevic, K.; Miletic Kovacevic, M.; Ljujic, B. Galectin 3 (LGALS3) Gene Polymorphisms Are Associated with Biochemical Parameters and Primary Disease in Patients with End-Stage Renal Disease in Serbian Population. J. Clin. Med. 2022, 11, 3874. https://doi.org/10.3390/jcm11133874

AMA Style

Kovacevic Z, Lazarevic T, Maksimovic N, Grk M, Volarevic V, Gazdic Jankovic M, Djukic S, Janicijevic K, Miletic Kovacevic M, Ljujic B. Galectin 3 (LGALS3) Gene Polymorphisms Are Associated with Biochemical Parameters and Primary Disease in Patients with End-Stage Renal Disease in Serbian Population. Journal of Clinical Medicine. 2022; 11(13):3874. https://doi.org/10.3390/jcm11133874

Chicago/Turabian Style

Kovacevic, Zoran, Tatjana Lazarevic, Nela Maksimovic, Milka Grk, Vladislav Volarevic, Marina Gazdic Jankovic, Svetlana Djukic, Katarina Janicijevic, Marina Miletic Kovacevic, and Biljana Ljujic. 2022. "Galectin 3 (LGALS3) Gene Polymorphisms Are Associated with Biochemical Parameters and Primary Disease in Patients with End-Stage Renal Disease in Serbian Population" Journal of Clinical Medicine 11, no. 13: 3874. https://doi.org/10.3390/jcm11133874

Note that from the first issue of 2016, this journal uses article numbers instead of page numbers. See further details here.

Article Metrics

Back to TopTop