Neutralizing Antibodies against SARS-CoV-2 and HIV

A special issue of Vaccines (ISSN 2076-393X).

Deadline for manuscript submissions: 1 August 2024 | Viewed by 3725

Special Issue Editor

Department of Cell and Molecular Biology, University of California, Berkeley, CA, USA
Interests: construction; characterization; immunization of nanoparticles that display a diverse array of influenza HA trimers

Special Issue Information

Dear Colleagues,

This Special Issue of Vaccines includes a collection of reviews and research articles that focus on neutralizing antibodies (NAbs) against SARS-CoV-2 and HIV viruses, covering topics such as the cellular and molecular mechanisms of antibody-mediated antiviral activities, analyses of the antibodies’ epitopes on viral antigens, structural bases of the antibody–antigen interactions, as well as implications of therapeutic developments.

The COVID-19 pandemic has caused immense damage to the global health and economy. The rapid development of COVID-19 vaccines helped to lower the risks of severe disease caused by viral infection. Studies on neutralizing antibodies targeting the SARS-CoV-2 S protein have provided guidance for the development of next-generation immunogens and rational designs of antibody-based prophylactic therapies.

Since its discovery in the early 1980s, the human immunodeficiency virus type 1 (HIV-1) has been a threat to human health. High mutation rates led to diverse strains and complex glycosylation patterns, and the multifold immune-suppressing mechanisms help the virus to escape human immune surveillance. Despite nearly four decades of research and development, which includes the more recent discovery and isolation of numerous broadly neutralizing antibodies (bNAbs) against HIV-1, improvements on HIV-1 Env-derived immunogens, various immunization and protection studies, as well as multiple clinical trials, an HIV-1 vaccine that efficiently elicits neutralizing antibodies remains a formidable challenge. However, characterizations of neutralizing antibodies against HIV-1 have provided researchers with guidance to developing the next-generation immunogens and therapeutic antibodies.

This Special Issue aims to provide opinions/commentaries, summaries, and in-depth analyses of neutralizing antibodies against SARS-CoV-2 and HIV-1. In this Special Issue, both original research articles and reviews are welcome. Research areas may include but are not limited to:

  • Molecular mechanisms of antigen–antibody interactions of neutralizing, as well as certain non-neutralizing, antibodies against SARS-CoV-2 or HIV-1;
  • Analyses of antibody epitopes on SARS-CoV-2 S or HIV-1 Env antigens;
  • Current progress and limitations of antibody-based therapeutic development;
  • Current progress and limitations of Nabs structure-based immunogen design;
  • Your proposed topics that you believe would be potentially interesting to our community.

We look forward to receiving your contributions.

Dr. Zhi Yang
Guest Editor

Manuscript Submission Information

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Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Vaccines is an international peer-reviewed open access monthly journal published by MDPI.

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Keywords

  • SARS-CoV-2
  • human immunodeficiency virus type 1 (HIV-1)
  • Neutralizing antibodies (NAbs)
  • antibody epitopes

Published Papers (2 papers)

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18 pages, 3619 KiB  
Article
An Efficient and Scalable Method for the Production of Immunogenic SARS-CoV-2 Virus-like Particles (VLP) from a Mammalian Suspension Cell Line
by Stefan Hirschberg, Fatemeh Ghazaani, Ghada Ben Amor, Markus Pydde, Alexander Nagel, Saveria Germani, Lara Monica, Anja Schlör, Hannes Bauer, Jane Hornung, Michael Voetz, Yamen Dwai, Benjamin Scheer, Frauke Ringel, Omar Kamal-Eddin, Christoph Harms, Jonas Füner, Lorenz Adrian, Axel Pruß, Kai Schulze-Forster, Katja Hanack and Julian Kamhieh-Milzadd Show full author list remove Hide full author list
Vaccines 2023, 11(9), 1469; https://doi.org/10.3390/vaccines11091469 - 09 Sep 2023
Cited by 2 | Viewed by 1890
Abstract
The rapid evolution of new SARS-CoV-2 variants poses a continuing threat to human health. Vaccination has become the primary therapeutic intervention. The goal of the current work was the construction of immunogenic virus-like particles (VLPs). Here, we describe a human cell line for [...] Read more.
The rapid evolution of new SARS-CoV-2 variants poses a continuing threat to human health. Vaccination has become the primary therapeutic intervention. The goal of the current work was the construction of immunogenic virus-like particles (VLPs). Here, we describe a human cell line for cost-efficient and scalable production of immunogenic SARS-CoV-2 VLPs. The modular design of the VLP-production platform facilitates rapid adaptation to new variants. Methods: The N, M-, and E-protein genes were integrated into the genome of Expi293 cells (ExpiVLP_MEN). Subsequently, this cell line was further modified for the constitutive expression of the SARS-CoV-2 spike protein. The resulting cell line (ExpiVLP_SMEN) released SARS-CoV-2 VLP upon exposure to doxycycline. ExpiVLP_SMEN cells were readily adapted for VLP production in a 5 L bioreactor. Purified VLPs were quantified by Western blot, ELISA, and nanoparticle tracking analysis and visualized by electron microscopy. Immunogenicity was tested in mice. Results: The generated VLPs contained all four structural proteins, are within the size range of authentic SARS-CoV-2 virus particles, and reacted strongly and specifically with immunoserum from naturally infected individuals. The VLPs were stable in suspension at 4 °C for at least 10 weeks. Mice immunized with VLPs developed neutralizing antibodies against lentiviruses pseudotyped with the SARS-CoV-2 spike protein. The flexibility of the VLP-production platform was demonstrated by the rapid switch of the spike protein to a new variant of concern (BA.1/Omicron). The present study describes an efficient, scalable, and adaptable production method of immunogenic SARS-CoV-2 VLPs with therapeutic potential. Full article
(This article belongs to the Special Issue Neutralizing Antibodies against SARS-CoV-2 and HIV)
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10 pages, 920 KiB  
Brief Report
SARS-CoV-2 Neutralizing Antibodies to B.1 and to BA.5 Variant after Booster Dose of BNT162b2 Vaccine in HIV Patients COVID-Naïve and on Successful Antiretroviral Therapy
by Ilaria Vicenti, Monica Basso, Nicole Pirola, Beatrice Bragato, Maria Cristina Rossi, Mario Giobbia, Susanna Pascoli, Antonio Vinci, Sara Caputo, Ilenia Varasi, Camilla Biba, Lia Fiaschi, Maurizio Zazzi and Saverio Giuseppe Parisi
Vaccines 2023, 11(4), 871; https://doi.org/10.3390/vaccines11040871 - 20 Apr 2023
Cited by 1 | Viewed by 1381
Abstract
Live virus neutralization is the gold standard to investigate immunity. This prospective observational study aimed to determine the magnitude of response against the original B.1 lineage and against the BA.5 lineage six months after the third BNT162b2 mRNA vaccine dose in patients with [...] Read more.
Live virus neutralization is the gold standard to investigate immunity. This prospective observational study aimed to determine the magnitude of response against the original B.1 lineage and against the BA.5 lineage six months after the third BNT162b2 mRNA vaccine dose in patients with HIV infection on successful antiretroviral treatment and no previous SARS-CoV-2 infection. A total of 100 subjects (M/F 83/17, median age 54 years) were included in the analysis: 95 had plasma HIV RNA <40 copies/mL, the median CD4+ T cell count at the administration of the third dose was 580 cells/mm3, and the median nadir CD4+ T cell count was 258 cells/mm3. Neutralizing antibodies (NtAb) against B.1 were detectable in all the subjects, but those to BA.5 were only detected in 88 (p < 0.001). The median NtAb titer to B.1 was significantly higher than that to BA.5 (393 vs. 60, p < 0.0001), and there was a strong positive correlation between the paired measurements (p < 0.0001). Linear regression on a subset of 87 patients excluding outlier NtAb titers showed that 48% of the changes in NtAb titers to BA.5 are related to the changes in value titers to B.1. SARS-CoV-2 variants evolve rapidly, challenging the efficacy of vaccines, and data on comparative NtAb responses may help in tailoring intervals between vaccine doses and in predicting vaccine efficacy. Full article
(This article belongs to the Special Issue Neutralizing Antibodies against SARS-CoV-2 and HIV)
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