Special Issues

Microorganisms publishes Special Issues to create collections of papers on specific topics, with the aim of building a community of authors and readers to discuss the latest research and develop new ideas and research directions. Special Issues are led by Guest Editors, who are experts on the topic. The journal’s Editor-in-Chief and/or designated EBM will oversee Guest Editor appointments and Special Issue proposals, checking their content for relevance and ensuring the suitability of the material for the journal. The papers published in a Special Issue will be collected and displayed on a dedicated page of the journal’s website. For any inquiries related to a Special Issue, please contact the Editorial Office.

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The Role of Gut Microbiota in Inflammatory Bowel Disease: Mechanisms and Novel Therapeutic Approaches submission deadline 15 Jul 2024 | 3 articles | Viewed by 3166 | Submission Open
Keywords: Crohn’ s disease; ulcerative colitis; diets; dysbiosis; faecal microbiota transplantation; immunomodulation; metagenomics; herbal medicines; probiotics; prebiotics
(This special issue belongs to the Section Gut Microbiota)
Microorganisms and Diseases Associated with Aquatic Animals 2.0 submission deadline 15 Jul 2024 | 2 articles | Viewed by 1337 | Submission Open
Keywords: microorganisms; diseases; aquatic animals; prevention; diagnosis; pathogenesis; virulence; vaccines; microbiota; immune system
(This special issue belongs to the Section Veterinary Microbiology)
Emerging Viral Zoonoses, Second Edition
edited by
submission deadline 15 Jul 2024 | 1 articles | Viewed by 1289 | Submission Open
Keywords: epidemiology; zoonoses; emerging viruses; prevention
(This special issue belongs to the Section Virology)
Advances in Metabolic Engineering of Industrial Microorganisms
edited by Shuwen Liu and Shuobo Shi
submission deadline 15 Jul 2024 | 1 articles | Viewed by 1217 | Submission Open
Keywords: metabolic engineering; microbial metabolism; industrial microorganisms
(This special issue belongs to the Section Microbial Biotechnology)
Advances in the Research on Leptospira and Leptospirosis
edited by Eliete Caló Romero and
submission deadline 15 Jul 2024 | 1 articles | Viewed by 880 | Submission Open
Keywords: leptospirosis; zoonoses; environmental exposure; epidemiology; pathogenesis; clinical cases; diagnosis; genomics; serology; vaccine; One Health
(This special issue belongs to the Section Parasitology)
Research on Replication Mechanisms and Molecular Virology of Influenza Virus
edited by Sang-Ik Park, Yeong-Bin Baek and Jun-Gyu Park
submission deadline 15 Jul 2024 | 1 articles | Viewed by 838 | Submission Open
Keywords: the molecular characterization of influenza infection; host– virus interaction; the mechanism of viral replication; virus life cycle: attachment; penetration; uncoating; replication; assembly; maturation; and release cellular factors involved in the virus life cycle; host immune system during infection; novel antiviral strategy; insights on future antiviral drug; novel vaccine strategy
(This special issue belongs to the Section Virology)
Advances in Phage Therapies
edited by
submission deadline 15 Jul 2024 | Viewed by 453 | Submission Open
Keywords: phage therapies
(This special issue belongs to the Section Medical Microbiology)
Helicobacter pylori Infection: Detection and Novel Treatment
edited by Evangelos Kazakos
submission deadline 15 Jul 2024 | Viewed by 392 | Submission Open
Keywords: Helicobacter pylori; gastrointestinal health; antibiotic resistance; infection
(This special issue belongs to the Section Medical Microbiology)
Interactions between Plant Pathogens and Insect Vectors
edited by Mitsuru Okuda
submission deadline 15 Jul 2024 | Viewed by 169 | Submission Open
Keywords: molecular mechanisms; virus acquisition; insect vectors; virus-vector interactions; vector-borne plant diseases; vector-borne viruses; disease management
(This special issue belongs to the Section Plant Microbe Interactions)
Airborne Microbial Communities submission deadline 15 Jul 2024 | Viewed by 146 | Submission Open
Keywords: microbial community; diversity; air; atmosphere; built environments; monitoring; bacteria; fungi; microorganisms; bioaerosols
(This special issue belongs to the Section Environmental Microbiology)
Impact of COVID-19 on the Microorganisms Causing Healthcare-Associated Infections submission deadline 15 Jul 2024 | Viewed by 132 | Submission Open
Keywords: healthcare-associated infections; microorganisms; COVID-19; surveillance; antimicrobial resistance
(This special issue belongs to the Section Medical Microbiology)
Latest Review Papers in Gut Microbiota 2024
edited by
submission deadline 15 Jul 2024 | Viewed by 113 | Submission Open
Keywords: gut microbiota; nutrition; gut diseases; host health
(This special issue belongs to the Section Gut Microbiota)
Ancient Microbiomes in the Environment
edited by
submission deadline 15 Jul 2024 | Viewed by 106 | Submission Open
Keywords: ancient sedimentary DNA; molecular paleoecology; paleomicrobiology; paleoenvironmental perturbations; bioinformatics and biostatistics
(This special issue belongs to the Section Environmental Microbiology)
Plant-Growth-Promoting Microbes Modulating Plant–Insect–Virus Interactions
edited by Saumik Basu
submission deadline 15 Jul 2024 | Viewed by 96 | Submission Open
Keywords: plant-growth-promoting microbes; pathogens; herbivores; defense responses; plant nutrition; rhizobia; AMF; secondary metabolites; transcriptomics; metabolomics
(This special issue belongs to the Section Plant Microbe Interactions)
Novel Strategies in the Study of the Human Gut Microbiota 2.0 submission deadline 15 Jul 2024 | Viewed by 86 | Submission Open
Keywords: gut microbiota; homeostasis; probiotics; prebiotics; animal models; in vitro models
(This special issue belongs to the Section Gut Microbiota)
Antimicrobial Peptides: Therapeutic Potentials 2.0
edited by
submission deadline 20 Jul 2024 | 4 articles | Viewed by 4993 | Submission Open
Keywords: antimicrobial peptides; host defence peptides; multi-drug resistant bacteria; novel antimicrobials; immunomodulation; immunotherapy; anticancer peptides; antiparasitic peptides; antifungal peptides; wound healing peptides
(This special issue belongs to the Section Antimicrobial Agents and Resistance)
Overviews of Clinical Microbial Infection
edited by
submission deadline 30 Jul 2024 | 1 articles | Viewed by 5341 | Submission Open
Keywords: infection; infectious disease; clinical
(This special issue belongs to the Section Medical Microbiology)
Latest Review Papers in Antimicrobial Agents and Resistance 2024
edited by
submission deadline 30 Jul 2024 | Viewed by 131 | Submission Open
Keywords: antimicrobial agents; antibacterial agents; antifungal agents; antiparasitic agents; resistance properties of microorganisms; antibiotic resistance; multidrug resistance
(This special issue belongs to the Section Antimicrobial Agents and Resistance)
Combating Antibiotic Resistance in Veterinary Microbiology
edited by
submission deadline 30 Jul 2024 | Viewed by 106 | Submission Open
Keywords: veterinary microbiology; antibiotic misuse; resistance genes; One Health approach; drug-resistant pathogens
(This special issue belongs to the Section Veterinary Microbiology)
Antibiotic Resistance and Virulence Factors of Bacteria Isolated from Food submission deadline 31 Jul 2024 | 6 articles | Viewed by 10459 | Submission Open
Keywords: antimicrobial resistance; food microbiology; food chain; virulence; biofilm; antimicrobial resistance mechanisms
(This special issue belongs to the Section Food Microbiology)
Microbial Safety of Fermented Products 2.0
edited by
submission deadline 31 Jul 2024 | 2 articles | Viewed by 8318 | Submission Open
(This special issue belongs to the Section Food Microbiology)
Gut Microbiota: Metagenomics to Study Ecology
edited by
submission deadline 31 Jul 2024 | 5 articles | Viewed by 5449 | Submission Open
Keywords: metagenomics; ecology; multi-omics; metagenomic assembled genomes; function; host– microbe interactions; behavior; local adaptation; biodiversity conservation
(This special issue belongs to the Section Gut Microbiota)
Research on Plant—Bacteria Interactions
edited by
submission deadline 31 Jul 2024 | 5 articles | Viewed by 5375 | Submission Open
Keywords: plant growth promoting bacteria; symbiosis; chemical communication; molecular dialog; environmental stress; soil functioning; plant protection
(This special issue belongs to the Section Plant Microbe Interactions)
Pathogens and Aquaculture
edited by and Juan Pablo Pontigo
submission deadline 31 Jul 2024 | 4 articles | Viewed by 5050 | Submission Open
Keywords: fish; salmon; diseases; pathology; histopathology; virology; molecular epidemiology
(This special issue belongs to the Section Veterinary Microbiology)
Staphylococcal Infections (Host and Pathogenic Factors) 3.0
edited by
submission deadline 31 Jul 2024 | 3 articles | Viewed by 4386 | Submission Open
Keywords: S. aureus; S. epidermidis; Staphylococcus spp.; pore-forming toxins (hemolysins and leukotoxins); quorum sensing (QS) and two component (TC) systems; colonization; biofilm formation; surface proteins; enterotoxins (superantigens)
(This special issue belongs to the Section Molecular Microbiology and Immunology)
Gut Microbiome in Homeostasis and Disease 2.0
edited by
submission deadline 31 Jul 2024 | 4 articles | Viewed by 3780 | Submission Open
(This special issue belongs to the Section Gut Microbiota)
The Infective Endocarditis submission deadline 31 Jul 2024 | 4 articles | Viewed by 3414 | Submission Open
Keywords: infective endocarditis (IE); native valve endocarditis; TAVI endocarditis; prosthetic valve endocarditis; staphylococcal endocarditis; enterococcal endocarditis; molecular biology diagnosis; cardiac PET/CT diagnosis; vascular graft infections; LVAD infections; endocarditis in the elderly; endocarditis in PWID; oral antimicrobial treatment of IE; cardiac surgery of IE; cardiovascular infections; cardiac implantable electronic device (CIED)-IE
(This special issue belongs to the Section Medical Microbiology)
Interactions between Parasites/Pathogens and Vectors
edited by and Norman Ratcliffe
submission deadline 31 Jul 2024 | 3 articles | Viewed by 3299 | Submission Open
(This special issue belongs to the Section Parasitology)
Molecular Epidemiology, Diagnostics and Management of Respiratory Virus Infections 2.0 submission deadline 31 Jul 2024 | 3 articles | Viewed by 3113 | Submission Open
Keywords: viral respiratory infections; molecular epidemiology; diagnostics; management
(This special issue belongs to the Section Public Health Microbiology)
Pathogen Infection in Wildlife 2.0
edited by
submission deadline 31 Jul 2024 | 3 articles | Viewed by 2997 | Submission Open
(This special issue belongs to the Section Veterinary Microbiology)
Prevention and Control of Zoonotic Pathogen Infection
edited by Maria L. Danzetta
submission deadline 31 Jul 2024 | 3 articles | Viewed by 2800 | Submission Open
Keywords: zoonotic bacteria; zoonotic pathogen; global public health; food production
(This special issue belongs to the Section Public Health Microbiology)
The Evolution of SARS-CoV-2: Molecular Properties, Virulence and Epidemiology
edited by
submission deadline 31 Jul 2024 | 2 articles | Viewed by 2267 | Submission Open
Keywords: SARS-CoV-2; molecular epidemiology; epidemiology infection; transmission; monitoring; diagnosis
(This special issue belongs to the Section Public Health Microbiology)
The Human Microbiome and Its Impact on Rheumatic and Neurological Diseases
edited by and
submission deadline 31 Jul 2024 | 1 articles | Viewed by 1908 | Submission Open
Keywords: gut; microbiota; autoimmunity; antigens; arthritis
(This special issue belongs to the Section Medical Microbiology)
Bioactive Substances, Gut Microbiome, and Host Health
edited by Gang Liu and Tianwei Wang
submission deadline 31 Jul 2024 | 1 articles | Viewed by 1639 | Submission Open
Keywords: bioactive substances; gut microbiome; immunity; metabolism; diseases; health
(This special issue belongs to the Section Gut Microbiota)
Anaerobic Microorganisms on Mars 2.0
edited by
submission deadline 31 Jul 2024 | 2 articles | Viewed by 1558 | Submission Open
Keywords: astrobiology; mars; habitability; anaerobes; martian Life
(This special issue belongs to the Section Environmental Microbiology)
Engineering Cyanophages and Cyanotoxins
edited by Tao Sun
submission deadline 31 Jul 2024 | 1 articles | Viewed by 1488 | Submission Open
Keywords: artificial phage/cyanophage genome; cyanotoxin; harmful algae
(This special issue belongs to the Section Microbial Biotechnology)
Secondary Metabolism of Microorganisms 3.0 submission deadline 31 Jul 2024 | 2 articles | Viewed by 1433 | Submission Open
(This special issue belongs to the Section Microbial Biotechnology)
Acanthamoeba spp. as Factors for Severe Infectious Diseases in Humans, 2nd Edition submission deadline 31 Jul 2024 | 1 articles | Viewed by 1376 | Submission Open
Keywords: Acanthamoeba; facultative parasites; epidemiological aspects; contact lens; diagnosis and treatment; Acanthamoeba keratitis; concomitant infections bacteria and fungi; endosymbiotic microorganisms; trophozoites and cysts; oral cavity microbiota; slit lamp; confocal microscopy; corneal isolates and cultivation methods; in vivo and in vitro and molecular techniques.
(This special issue belongs to the Section Medical Microbiology)
Advances in Brucella
edited by
submission deadline 31 Jul 2024 | 1 articles | Viewed by 1209 | Submission Open
(This special issue belongs to the Section Medical Microbiology)
Molecular Epidemiology of Leishmaniasis
edited by
submission deadline 31 Jul 2024 | 1 articles | Viewed by 1045 | Submission Open
Keywords: leishmaniasis; molecular epidemiology; genomic epidemiology; genetic markers; transmission; molecular diagnosis; molecular taxonomy
(This special issue belongs to the Section Parasitology)
Genomics Approaches in Microbial Ecology
edited by Hugo César Ramírez-Saad and César Hernández-Rodríguez
submission deadline 31 Jul 2024 | 1 articles | Viewed by 1011 | Submission Open
Keywords: soil microorganisms; microbes associated with plants; microbes associated with animals; microbial ecology; omics approaches; microbiomes; microbial communities; microbial symbioses; bacteria; archaea; fungi; algae; protists; viruses
(This special issue belongs to the Section Molecular Microbiology and Immunology)
Microbial Community Structure in Marine and Coastal Sediments
edited by Alejandra Prieto-Davó
submission deadline 31 Jul 2024 | 1 articles | Viewed by 917 | Submission Open
Keywords: microbial communities; microbial symbiosis; marine ecology; coastal sediment
(This special issue belongs to the Section Environmental Microbiology)
Matrix-Assisted Laser Desorption/Ionization Time of Flight Mass Spectrometry (MALDI-TOF MS) for the Identification of Pathogenic Microorganisms 3.0
edited by
submission deadline 31 Jul 2024 | 1 articles | Viewed by 883 | Submission Open
Keywords: MALDI-TOF MS; diagnosis; microorganism identification; bacteria; viruses; parasites; fungi; antimicrobial susceptibility testing
(This special issue belongs to the Section Medical Microbiology)
Applied Microbiome Science and Technology submission deadline 31 Jul 2024 | 1 articles | Viewed by 845 | Submission Open
Keywords: microbiome-host-environment; diagnostics for humans; plants or environments; digital therapeutics for health of humans; plants; or environments
(This special issue belongs to the Section Microbiomes)
Fungal Biology and Interactions 2.0
edited by and Roberto Nascimento Silva
submission deadline 31 Jul 2024 | 1 articles | Viewed by 741 | Submission Open
(This special issue belongs to the Section Molecular Microbiology and Immunology)
Advances in Microbial Pathogenesis and Host Responses submission deadline 31 Jul 2024 | 1 articles | Viewed by 728 | Submission Open
Keywords: microbial infections; pathogenesis; microbiota; immune response; host-pathogen interactions; antibiotic resistance; clinical microbiology; public health; drug development; new therapeutic strategies
(This special issue belongs to the Section Public Health Microbiology)
Animal Virology, Molecular Diagnostics and Vaccine Development
edited by Elizabeth V. Fowler and Rebecca K. Ambrose
submission deadline 31 Jul 2024 | Viewed by 256 | Submission Open
Keywords: animal health; vaccine; in-field diagnostics; viral pathogens; novel molecular technologies
(This special issue belongs to the Section Virology)
Influenza Prevention: Exploring the Progress and Persevering through Challenges
edited by Filippo Ansaldi and
submission deadline 31 Jul 2024 | Viewed by 202 | Submission Open
Keywords: vaccine; immunization; preventive strategies; influenza
(This special issue belongs to the Section Medical Microbiology)
State of the Art of Wildlife Infection in Europe
edited by
submission deadline 31 Jul 2024 | Viewed by 181 | Submission Open
Keywords: wildlife; wildlife infection; wildlife zoonosis; one health; wildlife monitoring; wildlife surveillance; public health
(This special issue belongs to the Section Veterinary Microbiology)
Epidemiology of Vector Born Diseases 3.0
edited by
submission deadline 31 Jul 2024 | Viewed by 134 | Submission Open
Keywords: vector-borne infectious diseases; malaria; leishmaniasis; trypanosomiasis; filariasis; molecular basis of interactions; pathogens; vaccines; drug development and resistance
(This special issue belongs to the Section Public Health Microbiology)
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