Data

Recently, data-driven decision-making has attracted great interest; this requires high-quality datasets. However, real-world datasets often feature missing values for unknown or intentional reasons, rendering data-driven decision-making inaccurate. If a machine learning model is trained using incomplete datasets with missing values, the inferred results may be biased. In this case, a commonly used technique is the missing value imputation (MVI), which fills missing data with possible values estimated based on observed values. Various data imputation methods using machine learning, statistical inference, and relational database theories have been developed. Among them, conventional machine learning based imputation methods that handle tabular data can deal with only numerical columns or are time-consuming and cumbersome because they create an individualized predictive model for each column. Therefore, we have developed a novel imputational neural network that we term the Denoising Self-Attention Network (DSAN). Our proposed DSAN can deal with tabular datasets containing both numerical and categorical columns; it considers discretized numerical values as categorical values for embedding and self-attention layers. Furthermore, the DSAN learns robust feature expression vectors by combining self-attention and denoising techniques, and can predict multiple, appropriate substituted values simultaneously (via multi-task learning). To verify the validity of the method, we performed data imputation experiments after arbitrarily generating missing values for several real-world tabular datasets. We evaluated both imputational and downstream task performances, and we have seen that the DSAN outperformed the other models, especially in terms of category variable imputation. Full article

BIM (building information modelling) has gained wider acceptance in the AEC (architecture, engineering, and construction) industry. Conversion from 3D point cloud data to vector BIM data remains a challenging and labour-intensive process, but particularly relevant during various stages of a project lifecycle. While the challenges associated with processing very large 3D point cloud datasets are widely known, there is a pressing need for intelligent geometric feature extraction and reconstruction algorithms for automated point cloud processing. Compared to outdoor scene reconstruction, indoor scenes are challenging since they usually contain high amounts of clutter. This dataset comprises the indoor point cloud obtained by scanning four different rooms (including a hallway): two office workspaces, a workshop, and a laboratory including a water tank. The scanned space is located at the Electrical and Computer Engineering department of the Faculty of Engineering of the University of Porto. The dataset is fully labelled, containing major structural elements like walls, floor, ceiling, windows, and doors, as well as furniture, movable objects, clutter, and scanning noise. The dataset also contains an as-built BIM that can be used as a reference, making it suitable for being used in Scan-to-BIM and Scan-vs-BIM applications. For demonstration purposes, a Scan-vs-BIM change detection application is described, detailing each of the main data processing steps. Full article

This data article relates to the paper “Review of the cost-optimal methodology implementation in Member States in compliance with the Energy Performance of Buildings Directive”. Datasets linked with this article refer to the analysis of the latest national cost-optimal reports, providing an assessment of the implementation of the cost-optimal methodology, as established by the Energy Performance of Building Directive (EPBD). Based on latest national reports, the data provided a comprehensive update to the cost-optimal methodology implementation throughout Europe, which is currently lacking harmonization. Datasets allow an overall overview of the status of the cost-optimal methodology implementation in Europe with details on the calculations carried out (e.g., multi-stage, dynamic, macroeconomic, and financial perspectives, included energy uses, and full-cost approach). Data relate to the implemented methodology, reference buildings, assessed cost-optimal levels, energy performance, costs, and sensitivity analysis. Data also provide insight into energy consumption, efficiency measures for residential and non-residential buildings, nearly zero energy buildings (NZEBs) levels, and global costs. The reported data can be useful to quantify the cost-optimal levels for different building types, both residential (average cost-optimal level 80 kWh/m²y for new, 130 kWh/m²y for existing buildings) and non-residential buildings (140 kWh/m²y for new, 180 kWh/m²y for existing buildings). Data outline weak and strong points of the methodology, as well as future developments in the light of the methodology revision foreseen in 2026. The data support energy efficiency and energy policies related to buildings toward the EU building stock decarbonization goal within 2050. Full article

Côte d’Ivoire, the world’s largest cocoa producer, faces the challenge of quality production. Immature or overripe pods cannot produce quality cocoa beans, resulting in losses and an unprofitable harvest. To help farmer cooperatives determine the maturity of cocoa pods in time, our study evaluates the use of automation tools based on similarity measures. Although standard techniques, such as visual inspection and weighing, are commonly used to identify the maturity of cocoa pods, the use of automation tools based on similarity measures can improve the efficiency and accuracy of this process. We set up a database of cocoa pod images and used two feature extractors: one based on convolutional neural networks (CNN), in particular, MobileNet, and the other based on texture analysis using a gray-level co-occurrence matrix (GLCM). We evaluated the impact of different color spaces and feature extraction methods on our database. We used mathematical similarity measurement tools, such as the Euclidean distance, correlation distance, and chi-square distance, to classify cocoa pod images. Our experiments showed that the chi-square distance measurement offered the best accuracy, with a score of 99.61%, when we used GLCM as a feature extractor and the Lab color space. Using automation tools based on similarity measures can improve the efficiency and accuracy of cocoa pod maturity determination. The results of our experiments prove that the chi-square distance is the most appropriate measure of similarity for this task. Full article

Remote sensing data play a crucial role in precision agriculture and natural resource monitoring. The use of unmanned aerial vehicles (UAVs) can provide solutions to challenges faced by farmers and natural resource managers due to its high spatial resolution and flexibility compared to satellite remote sensing. This paper presents UAV and spectral datasets collected from different provinces in South Africa, covering different crops at the farm level as well as natural resources. UAV datasets consist of five multispectral bands corrected for atmospheric effects using the PIX4D mapper software to produce surface reflectance images. The spectral datasets are filtered using a Savitzky–Golay filter, corrected for Multiplicative Scatter Correction (MSC). The first and second derivatives and the Continuous Wavelet Transform (CWT) spectra are also calculated. These datasets can provide baseline information for developing solutions for precision agriculture and natural resource challenges. For example, UAV and spectral data of different crop fields captured at spatial and temporal resolutions can contribute towards calibrating satellite images, thus improving the accuracy of the derived satellite products. Full article

Human sex recognition with electrocardiogram signals is an emerging area in machine learning, mostly oriented toward neural network approaches. It might be the beginning of a field of heart behavior analysis focused on sex. However, a person’s heartbeat changes during daily activities, which could compromise the classification. In this paper, with the intention of capturing heartbeat dynamics, we divided the heart rate into different intervals, creating a specialized identification model for each interval. The sexual differentiation for each model was performed with a deep convolutional neural network from images that represented the RGB wavelet transformation of ECG pseudo-orthogonal X, Y, and Z signals, using sufficient samples to train the network. Our database included 202 people, with a female-to-male population ratio of 49.5–50.5% and an observation period of 24 h per person. As our main goal, we looked for periods of time during which the classification rate of sex recognition was higher and the process was faster; in fact, we identified intervals in which only one heartbeat was required. We found that for each heart rate interval, the best accuracy score varied depending on the number of heartbeats collected. Furthermore, our findings indicated that as the heart rate increased, fewer heartbeats were needed for analysis. On average, our proposed model reached an accuracy of 94.82% ± 1.96%. The findings of this investigation provide a heartbeat acquisition procedure for ECG sex recognition systems. In addition, our results encourage future research to include sex as a soft biometric characteristic in person identification scenarios and for cardiology studies, in which the detection of specific male or female anomalies could help autonomous learning machines move toward specialized health applications. Full article

The COVID-19 pandemic has had a significant impact on various aspects of society, including economic, health, political, and work-related domains. The pandemic has also caused an emotional effect on individuals, reflected in their opinions and comments on social media platforms, such as Twitter. This study explores the evolution of sentiment in Spanish pandemic tweets through a data analysis based on a fine-tuned BERT architecture. A total of six million tweets were collected using web scraping techniques, and pre-processing was applied to filter and clean the data. The fine-tuned BERT architecture was utilized to perform sentiment analysis, which allowed for a deep-learning approach to sentiment classification. The analysis results were graphically represented based on search criteria, such as “COVID-19” and “coronavirus”. This study reveals sentiment trends, significant concerns, relationship with announced news, public reactions, and information dissemination, among other aspects. These findings provide insight into the emotional impact of the COVID-19 pandemic on individuals and the corresponding impact on social media platforms. Full article

Recently, there has been a growing research interest in utilizing the electroencephalogram (EEG) as a non-invasive diagnostic tool for neurodegenerative diseases. This article provides a detailed description of a resting-state EEG dataset of individuals with Alzheimer’s disease and frontotemporal dementia, and healthy controls. The dataset was collected using a clinical EEG system with 19 scalp electrodes while participants were in a resting state with their eyes closed. The data collection process included rigorous quality control measures to ensure data accuracy and consistency. The dataset contains recordings of 36 Alzheimer’s patients, 23 frontotemporal dementia patients, and 29 healthy age-matched subjects. For each subject, the Mini-Mental State Examination score is reported. A monopolar montage was used to collect the signals. A raw and preprocessed EEG is included in the standard BIDS format. For the preprocessed signals, established methods such as artifact subspace reconstruction and an independent component analysis have been employed for denoising. The dataset has significant reuse potential since Alzheimer’s EEG Machine Learning studies are increasing in popularity and there is a lack of publicly available EEG datasets. The resting-state EEG data can be used to explore alterations in brain activity and connectivity in these conditions, and to develop new diagnostic and treatment approaches. Additionally, the dataset can be used to compare EEG characteristics between different types of dementia, which could provide insights into the underlying mechanisms of these conditions. Full article

MicroRNA transcriptomes from fresh tumors and the adjacent normal tissues were profiled in 10 Korean patients diagnosed with lung adenocarcinoma using a next-generation sequencing (NGS) technique called miRNA-seq. The sequencing quality was assessed using FastQC, and low-quality or adapter-contaminated portions of the reads were removed using Trim Galore. Quality-assured reads were analyzed using miRDeep2 and Bowtie. The abundance of known miRNAs was estimated using the reads per million (RPM) normalization method. Subsequently, using DESeq2 and Wx, we identified differentially expressed miRNAs and potential miRNA biomarkers for lung adenocarcinoma tissues compared to adjacent normal tissues, respectively. We defined reliable miRNA biomarkers for lung adenocarcinoma as those detected by both methods. The miRNA-seq data are available in the Gene Expression Omnibus (GEO) database under accession number GSE196633, and all processed data can be accessed via the Mendeley data website. Full article

The aquatic environment faces increasing threats from a variety of unregulated organic chemicals originating from human activities, collectively known as chemicals of emerging concern (CECs). These include pharmaceuticals, personal-care products, pesticides, surfactants, industrial chemicals, and their transformation products. CECs enter aquatic environments through various sources, including effluents from wastewater treatment plants, industrial facilities, runoff from agricultural and residential areas, as well as accidental spills. Data on the occurrence of CECs in the marine environment are scarce, and more information is needed to assess the chemical and ecological status of water bodies, and to prioritize toxic chemicals for further studies or risk assessment. In this study, we describe a monitoring campaign targeting CECs in surface waters at the Swedish west coast using, for the first time, an on-site large volume solid phase extraction (LVSPE) device. We detected up to 80 and 227 CECs in marine sites and the wastewater treatment plant (WWTP) effluent, respectively. The dataset will contribute to defining pollution fingerprints and assessing the chemical status of marine and freshwater systems affected by industrial hubs, agricultural areas, and the discharge of urban wastewater. Full article

Low-dose radiation refers to exposure to ionizing radiation at levels that are generally considered safe and not expected to cause immediate health effects. However, the effects of low-dose radiation are still not fully understood, and research in this area is ongoing. In this study, we investigated the alterations in gene expression profiles of human aortic endothelial cells (HAECs) and diabetic human aortic endothelial cells (T2D-HAECs) derived from patients with type 2 diabetes. To this end, we used RNA-seq to profile the transcriptomes of cells exposed to varying doses of low-dose radiation (0.1 Gy, 0.5 Gy, and 2.0 Gy) and compared them to a control group with no radiation exposure. Differentially expressed genes and enriched pathways were identified using the DESeq2 and gene set enrichment analysis (GSEA) methods, respectively. The data generated in this study are publicly available through the gene expression omnibus (GEO) database with the accession number GSE228572. This study provides a valuable resource for examining the effects of low-dose radiation on HAECs and T2D-HAECs, thereby contributing to a better understanding of the potential human health risks associated with low-dose radiation exposure. Full article

This paper presents a set of various geological and geophysical data for the Arctic zone, including some detailed models for the eastern part of the Russian Arctic zone. This hard-to-access territory has a complex geological structure, which is poorly studied by direct geophysical methods. Therefore, these data can be used in an integrative analysis for different purposes. These are the gravity field, heat flow, and various seismic tomography models. The gravity field data include several reductions calculated during our preceding studies, which are more appropriate for the study of the Earth’s interiors than the initial free air anomalies. Specifically, these are the Bouguer, isostatic, and decompensative gravity anomalies. A surface heat flow map included in the dataset is based on a joint inversion of multiple geophysical data constrained by the observations from the International Heat Flow Commission catalog. Available seismic tomography models were analyzed to select the best one for further investigation. We provide the models for the sedimentary cover and the Moho depth, which are significantly improved compared to the existing ones. The database provides a basis for qualitative and quantitative analysis of the region. Full article

The number of reviews from customers on travel websites and platforms is quickly increasing. They provide people with the ability to write reviews about their experience with respect to service quality, location, room, and cleanliness, thereby helping others before booking hotels. Many people fail to consider hotel bookings because the numerous reviews take a long time to read, and many are in a non-native language. Thus, hotel businesses need an efficient process to analyze and categorize the polarity of reviews as positive, negative, or neutral. In particular, low-resource languages such as Thai have greater limitations in terms of resources to classify sentiment polarity. In this paper, a sentiment analysis method is proposed for Thai sentiment classification in the hotel domain. Firstly, the Word2Vec technique (the continuous bag-of-words (CBOW) and skip-gram approaches) was applied to create word embeddings of different vector dimensions. Secondly, each word embedding model was combined with deep learning (DL) models to observe the impact of each word vector dimension result. We compared the performance of nine DL models (CNN, LSTM, Bi-LSTM, GRU, Bi-GRU, CNN-LSTM, CNN-BiLSTM, CNN-GRU, and CNN-BiGRU) with different numbers of layers to evaluate their performance in polarity classification. The dataset was classified using the FastText and BERT pre-trained models to carry out the sentiment polarity classification. Finally, our experimental results show that the WangchanBERTa model slightly improved the accuracy, producing a value of 0.9225, and the skip-gram and CNN model combination outperformed other DL models, reaching an accuracy of 0.9170. From the experiments, we found that the word vector dimensions, hyperparameter values, and the number of layers of the DL models affected the performance of sentiment classification. Our research provides guidance for setting suitable hyperparameter values to improve the accuracy of sentiment classification for the Thai language in the hotel domain. Full article

This paper presents a unique and extensive dataset containing over 33 million entries with pairs in the form “spelling error → correction” from ispravi.me, the most popular Croatian online spellchecking service, collected since 2008. The dataset, compiled from the contribution of nearly 900,000 users, is a valuable resource for researchers and developers in the field of natural language processing (NLP), improving spellcheck accuracy, and language learning applications. The dataset may be used to accomplish several goals: (1) improving spellchecking accuracy by incorporating common user corrections and reducing false positives and negatives; (2) helping language learners identify common errors and learn correct spelling through targeted feedback; (3) analyzing data trends and patterns to uncover the most common spelling errors and their underlying causes; (4) identifying and evaluating factors that influence typing input; (5) improving NLP applications such as text recognition and machine translation. Tasks specific to the Croatian language include the creation of a letter-level confusion matrix and the refinement of word suggestions based on historical usage of the service. This comprehensive dataset provides researchers and practitioners with a wealth of information, opening the path for advancements in spellchecking, language learning, and NLP applications in the Croatian language. Full article

This study introduces a dataset of crop imagery captured during the 2022 growing season in the Eastern Kazakhstan region. The images were acquired using a multispectral camera mounted on an unmanned aerial vehicle (DJI Phantom 4). The agricultural land, encompassing 27 hectares and cultivated with wheat, barley, and soybean, was subjected to five aerial multispectral photography sessions throughout the growing season. This facilitated thorough monitoring of the most important phenological stages of crop development in the experimental design, which consisted of 27 plots, each covering one hectare. The collected imagery underwent enhancement and expansion, integrating a sixth band that embodies the normalized difference vegetation index (NDVI) values in conjunction with the original five multispectral bands (Blue, Green, Red, Red Edge, and Near Infrared Red). This amplification enables a more effective evaluation of vegetation health and growth, rendering the enriched dataset a valuable resource for the progression and validation of crop monitoring and yield prediction models, as well as for the exploration of precision agriculture methodologies. Full article

Many previous studies have demonstrated that transcutaneous vagus nerve stimulation (VNS) has the potential to exhibit therapeutic effects similar to its invasive counterpart. An objective assessment of VNS requires a reliable biomarker of successful vagal activation. Although many potential biomarkers have been proposed, most studies have focused on heart rate variability (HRV). Despite the physiological rationale for HRV as a biomarker for assessing vagal stimulation, data on its effects on HRV are equivocal. To further advance this field, future studies investigating VNS should contain adequate methodological specifics that make it possible to compare the results between studies, to replicate studies, and to enhance the safety of study participants. This article describes the design and methodology of a randomized study evaluating the effect of short-term noninvasive stimulation of the auricular branch of the vagus nerve on parameters of HRV. Primary records of rhythmograms of all the subjects, as well as a dataset with clinical, instrumental, and laboratory data of all the current study subjects are in the public domain for possible secondary analysis to all interested researchers. The physiological interpretation of the obtained data is not considered in the article. Full article

The RaspberrySet dataset is a valuable resource for those working in the field of agriculture, particularly in the selection and breeding of ecologically adaptable berry cultivars. This is because long-term changes in temperature and weather patterns have made it increasingly important for crops to be able to adapt to their environment. To assess the suitability of different cultivars or to make yield predictions, it is necessary to describe and evaluate berries’ characteristics at various growth stages. This process is typically carried out visually, but it can be time-consuming and labor-intensive, requiring significant expert knowledge. The RaspberrySet dataset was created to assist with this process, and it includes images of raspberry berries at five different stages of development. These stages are flower buds, flowers, unripe berries, and ripe berries. All these stages of raspberry images classified buds, damaged buds, flowers, unripe berries, and ripe berries and were annotated using ground truth ROI and presented in YOLO format. The dataset includes 2039 high-resolution RGB images, with a total of 46,659 annotations provided by experts using Label Studio software (1.7.1). The images were taken in various weather conditions, at different times of the day, and from different angles, and they include fully visible buds, flowers, berries, and partially obscured buds. This dataset is intended to improve the efficiency of berry breeding and yield estimation and to identify the raspberry phenotype more accurately. It may also be useful for breeding other fruit crops, as it allows for the reliable detection and phenotyping of yield components at different stages of development. By providing a homogenized dataset of images taken on-site at the Institute of Horticulture in Dobele, Latvia, the RaspberrySet dataset offers a valuable resource for those working in horticulture. Full article

A high temporal and spatial resolution emission inventory for the North Sea and Baltic Sea was compiled using current emission factors and ship activity data. The inventory includes seagoing vessels over 100 GT registered with the International Maritime Organization traversing in the North and Baltic Seas. A bottom-up approach was chosen for the compilation of the inventory, which provides emission levels of the air pollutants CO₂, NO_x, SO₂, PM_2.5, CO, BC, Ash, NMVOC, and POA, as well as the speed-dependent fuel and energy consumption. Input data come from both main and auxiliary engines, as well as well-to-tank and tank-to-propeller emission and energy and fuel consumption quantities. The georeferenced data are provided in a temporal resolution of five minutes. The data can be used to assess, inter alia, the health effects of maritime emissions, the social costs of maritime transport, emission mitigation effects of alternative fuel scenarios, and shore-to-ship power supply. Full article

(1) Background: Bioeconomy aims to reduce dependence on non-renewable resources and foster economic growth through the development of new bio-based products and services. Achieving this goal requires social acceptance and stakeholder engagement in the development of sustainable technologies. The objective of this data article is to provide a dataset derived from a survey with a representative sample of 500 citizens over 18 years old based in the Community of Madrid. (2) Methods: We created a questionnaire on the social acceptance of technologies and bio-based products to later gather the responses using a SurveyMonkey panel for the Community of Madrid through an online CAWI survey; (3) Results: A dataset with a total of 82 columns with all responses is the result of this study. (4) Conclusions: This data article provides not only a valuable representative dataset of citizens of the Community of Madrid but also sufficient resources to replicate the same study in other regions. Full article