Special Issue "The End of the COVID-19 Pandemic—What Is Currently Known and What Could Have Been Useful Four Years Ago?"

A special issue of Biomedicines (ISSN 2227-9059). This special issue belongs to the section "Immunology and Immunotherapy".

Deadline for manuscript submissions: 31 December 2023 | Viewed by 2062

Special Issue Editors

Department of Neurodegeneration Diagnostics, Medical University of Bialystok, 15-269 Bialystok, Poland
Interests: neurodegenerative diseases; cancer; specific proteins; cytokines; biomarkers; non-invasive diagnosis
Special Issues, Collections and Topics in MDPI journals
Department of Biochemical Diagnostics, Medical University of Bialystok, Waszyngtona 15A St., 15-269 Bialystok, Poland
Interests: biomarkers; non-invasive diagnosis; inflammation; tumor biomarkers; neuroinflammation; specific proteins
Special Issues, Collections and Topics in MDPI journals

Special Issue Information

Dear Colleagues,

COVID-19 is a contagious disease caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). The first known case was identified in Wuhan, China, in December 2019. The disease spread worldwide, leading to an ongoing pandemic which was announced on March 11, 2020 by the World Health Organization (WHO). In the face of the growing number of patients affected by this disease, there was an urgent need to determine how to treat it and effectively detect infection. In one of the more severe stages of the pandemic, i.e., in May 2020, the highest mortality rate was observed in Italy, which was 14%.

In March 2020, scientists performed full sequencing of the new coronavirus, SARS-CoV-2, which contributed to the subsequent development of vaccines. The genome of the new coronavirus, SARS-CoV-2, shows 79% similarity to SARS-CoV-1 and 50% similarity to MERS-CoV. In addition, SARS-CoV-2, similarly to all coronaviruses, has a positive RNA strand. SARS-CoV-2 is mainly spread via droplet–air. Infection can also occur through the direct contact of mucous membranes with contaminated surfaces, e.g., through dirty hands. Infection occurs as a result of binding the SARS-CoV-2 S protein to, e.g., the ACE2 receptor, located, among other areas, on type 2 follicular epithelial cells. SARS-CoV-2 infection has a wide clinical spectrum; however, the course of the disease in most patients is mild and does not require hospitalization.

The first stage of the disease is often asymptomatic or with mild symptoms, e.g., fever, chills or cough. In some patients, especially young people, a loss of smell (anosmia) or loss of taste (ageusia) may be the only manifestation of the disease. In turn, in the elderly, the occurrence of unusual symptoms such as body temperature fluctuations, deliration and falls (associated with fatigue and weakness) may precede respiratory symptoms. After the acute phase of COVID-19, post COVID syndrome could occur (PC19, long-COVID). Its frequency, exact clinical picture and therapeutic recommendations are not yet fully known. Post COVID syndrome is assumed to include an abnormality 4 weeks after the onset of COVID-19. The most common complications are pulmonary tiredness, dyspnea, heart palpitations and olfactory and taste disturbances.

Despite the fact that on May 5, 2023, WHO declared the end of the COVID-19 global health emergency, we are still struggling with its consequences. However, during the pandemic, many studies and observations were carried out that expanded our knowledge about COVID-19. That is why this Special Issue aims to encourage continued comprehensive study in the field of biomolecular science connected with this disease over the past four years.

Dr. Monika Zajkowska
Dr. Monika Gudowska-Sawczuk
Guest Editors

Manuscript Submission Information

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Keywords

  • COVID-19
  • SARS-CoV-2
  • pandemic
  • diagnosis
  • biomarkers
  • treatment
  • immunity
  • inflammation
  • cytokines
  • vaccine

Published Papers (3 papers)

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Research

10 pages, 1777 KiB  
Article
Application of a Receptor-Binding-Domain-Based Simple Immunoassay for Assessing Humoral Immunity against Emerging SARS-CoV-2 Virus Variants
Biomedicines 2023, 11(12), 3193; https://doi.org/10.3390/biomedicines11123193 - 01 Dec 2023
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Abstract
We have developed a simple, rapid, high-throughput RBD-based ELISA to assess the humoral immunity against emerging SARS-CoV-2 virus variants. The cDNAs of the His-tagged RBD proteins of the virus variants were stably engineered into HEK cells secreting the protein into the supernatant, and [...] Read more.
We have developed a simple, rapid, high-throughput RBD-based ELISA to assess the humoral immunity against emerging SARS-CoV-2 virus variants. The cDNAs of the His-tagged RBD proteins of the virus variants were stably engineered into HEK cells secreting the protein into the supernatant, and RBD purification was performed by Ni-chromatography and buffer exchange by membrane filtration. The simplified assay uses single dilutions of sera from finger-pricked native blood samples, purified RBD in 96-well plates, and a chromogenic dye for development. The results of this RBD-ELISA were confirmed to correlate with those of a commercial immunoassay measuring antibodies against the Wuhan strain, as well as direct virus neutralization assays assessing the cellular effects of the Wuhan and the Omicron (BA.5) variants. Here, we document the applicability of this ELISA to assess the variant-specific humoral immunity in vaccinated and convalescent patients, as well as to follow the time course of selective vaccination response. This simple and rapid assay, easily modified to detect humoral immunity against emerging SARS-CoV-2 virus variants, may help to assess the level of antiviral protection after vaccination or infection. Full article
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12 pages, 2351 KiB  
Article
Characterisation of Ferritin–Lymphocyte Ratio in COVID-19
Biomedicines 2023, 11(10), 2819; https://doi.org/10.3390/biomedicines11102819 - 18 Oct 2023
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Abstract
Introduction: The ferritin–lymphocyte ratio (FLR) is a novel inflammatory biomarker for the assessment of acute COVID-19 patients. However, the prognostic value of FLR for predicting adverse clinical outcomes in COVID-19 remains unclear, which hinders its clinical translation. Methods: We characterised the prognostic value [...] Read more.
Introduction: The ferritin–lymphocyte ratio (FLR) is a novel inflammatory biomarker for the assessment of acute COVID-19 patients. However, the prognostic value of FLR for predicting adverse clinical outcomes in COVID-19 remains unclear, which hinders its clinical translation. Methods: We characterised the prognostic value of FLR in COVID-19 patients, as compared to established inflammatory markers. Results: In 217 study patients (69 years [IQR: 55–82]; 60% males), FLR was weakly correlated with CRP (R = 0.108, p = 0.115) and white cell count (R = −0.144; p = 0.034). On ROC analysis, an FLR cut-off of 286 achieved a sensitivity of 86% and a specificity of 30% for predicting inpatient mortality (AUC 0.60, 95% CI: 0.53–0.67). The negative predictive values of FLR for ruling out mortality, non-invasive ventilation requirement and critical illness (intubation and/or ICU admission) were 86%, 85% and 93%, respectively. FLR performed similarly to CRP (AUC 0.60 vs. 0.64; p = 0.375) for predicting mortality, but worse than CRP for predicting non-fatal outcomes (all p < 0.05). On Kaplan–Meier analysis, COVID-19 patients with FLR values > 286 had worse inpatient survival than patients with FLR ≤ 286, p = 0.041. Conclusions: FLR has prognostic value in COVID-19 patients, and appears unrelated to other inflammatory markers such as CRP and WCC. FLR exhibits high sensitivity and negative predictive values for adverse clinical outcomes in COVID-19, and may be a good “rule-out” test. Further work is needed to improve the sensitivity of FLR and validate its role in prospective studies for guiding clinical management. Full article
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15 pages, 4698 KiB  
Article
Thrombosis in Multisystem Inflammatory Syndrome Associated with COVID-19 in Children: Retrospective Cohort Study Analysis and Review of the Literature
Biomedicines 2023, 11(8), 2206; https://doi.org/10.3390/biomedicines11082206 - 06 Aug 2023
Cited by 1 | Viewed by 782
Abstract
Background: The causative agent of the new coronavirus infection SARS-CoV-2 has unique properties causing hyperinflammatory syndrome and cytokine storm, as well as widespread endotheliitis and thrombotic microangiopathy, initially detected in the lungs of adult patients who died from a severe form of the [...] Read more.
Background: The causative agent of the new coronavirus infection SARS-CoV-2 has unique properties causing hyperinflammatory syndrome and cytokine storm, as well as widespread endotheliitis and thrombotic microangiopathy, initially detected in the lungs of adult patients who died from a severe form of the disease. Venous and arterial thrombosis in adults were identified as common causes of severe complications and deaths in new coronavirus infections. There are very few reports of thrombotic events in children with COVID-19 in the literature. Methods: We conducted a retrospective analysis of the histories of 60 patients in the Irkutsk Regional Children’s Clinical Hospital from November 2020 to November 2022 with a MIS-C diagnosis established according to WHO criteria, of which 8 (13.3%) were diagnosed with venous and/or arterial thrombosis, confirmed by laboratory and ultrasound and/or X-ray methods. Results: The average age of children with thrombosis (Me) was 7.5 years (min 4 months, max 17 years), with a M:F ratio of 3.0. Venous thrombosis was detected in six of the eight patients, including in the deep veins of the lower extremities in four. Pulmonary embolism occurred in two (one of them was fatal), and cerebral venous sinus thrombosis and thrombosis of the branches of the upper and lower vena cava were found in one patient. Extensive bilateral stroke due to thrombosis of the large cerebral arteries occurred in two patients, including one in combination with distal gangrene. Secondary thrombotic renal microangiopathy took place in three of the eight patients. Among these three, atypical HUS was diagnosed in one case. Multiple thrombosis involving the venous and arterial bed was detected in four of the eight patients. High levels of D-dimer, thrombocytopenia, increased NT-proBNP, cerebral coma, and aseptic meningitis were the events most often associated with thrombosis. All patients received immunomodulatory therapy (immunoglobulin, dexamethasone/methylprednisolone), pathogenetic therapy for multiorgan failure, anticoagulant therapy with heparin/LMWH, and acetylsalicylic acid. Biologics were used in two patients. Conclusions: The main predictors of thrombosis in children with MIS-C were increased D-dimer, thrombocytopenia, hospitalization in the ICU, and noncardiogenic pulmonary edema. Thrombosis of the deep veins of the lower extremities, large cerebral arteries, and secondary thrombotic microangiopathy was common. There was a single death (12.5% of the eight patients), associated with PE. Full article
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