Crops, Volume 3, Issue 1 (March 2023) – 8 articles

Amaranthus caudatus is a nutrient-rich Andean pseudocereal with wide genetic variability. Six productive varieties (Oscar Blanco, Pucara, Tomina, Cotahuasi, Barbechos, and Guindo Criollo) were compared by proximate, mineral, and fatty acid composition. The proximal content showed certain singularities in the varieties. Barbechos and Guindo Criollo stood out for their fat content (9.50% and 9.01%, respectively), while Tomina stood out for their carbohydrate content (72.6%), and Pucara and Oscar Blanco for their fiber content (4.59% and 4.48%, respectively). The mineral content presented differences, highlighting the Ca content for Pucara (108 mg/100 g), and Tomina with micro-minerals (Zn, Mn, Fe, and Cu, 4.67, 5.90, 9.13 and 1.03 mg/100 g, respectively). All varieties showed high tricosanic acid (C23:0) content, and Cotahuasi was highlighted for its high linoleic acid (C18:2) content. Multivariate analysis showed negative correlations between proteins and carbohydrates, and between fat and fiber in their proximal content, as well as between Fe and Na for their mineral content, and C18:1 and C18:2 for the fatty acids. Although certain differences were found, the total nutritional composition tended to have minor differences between the investigated varieties. Full article

Rice protein is considered an important dietary protein source. Information regarding rice nutrient-related protein expression is still scarce, hence further study investigating this aspect is highly needed. Herein, we applied sequential window acquisition of all theoretical mass spectra (SWATH-MS) for a comparative proteomic analysis across six different Malaysian rice varieties. These consisted of black rice (BR: PH9 and BALI), red rice (RR: MRQ100 and MRM16), and white rice (WR: MRQ76 and MR297). This study aimed to unravel rice nutrient-related proteins and if their expressions were significantly different across varieties. A total of 4022 quantified proteins were found to be significantly expressed across all varieties with a false discovery rate (FDR) < 1% and p < 0.05. While among 1792 differentially expressed proteins (DEPs) that were identified, 74 DEPs had functions related to nutrient biosynthesis. There were significantly higher expressions of key enzymes for the carotenoid and amylopectin biosynthesis pathways and seed storage proteins, i.e., prolamins and glutelins in RR. Glycoproteins such as cupin and germin-like protein, as well as enzymes that are involved in the biosynthesis of thiamine and anthocyanin were abundantly found in BR. WR was particularly enriched with biosynthesis enzymes for essential amino acids (methionine and arginine), vitamin B, and unsaturated fatty acid. This study provides us insights into the differential expressions of storage and functional proteins with nutrient-related properties in shaping rice grain pigmentations and plant immunity, as well as in contributing diverse health benefits as daily functional food for human consumption. Full article

Meteorological factors have significant impacts on crop yield. To account for the impact of meteorological factors on foxtail millet (Setaria italica Beauv.) production in different water conditions, a total of 38 collected varieties were grown in nine seasons from 2011 to 2020 (except 2016) under well-watered (WW) and water-stressed (WS) conditions. The results showed that there was a large seasonal variation in GY; the variation ranged from 4.92 t ha⁻¹ to 6.95 t ha⁻¹ under the WW treatment and from 3.50 t ha⁻¹ to 5.77 t ha⁻¹ under the WS treatment. The impacts of meteorological factors on foxtail millet under the WW and WS treatments were different; sunshine duration during the whole stage, vegetative stage and reproductive stage had the greatest impact under the WW treatment, while under the WS treatment, sunshine duration and the diurnal temperature range during the whole stage and reproductive stage were the greatest impact factors on grain yield. This work could help us in high-yield foxtail millet cultivation and breeding. Full article

Rice is an indispensable crop in East and Southeast Asia, and the study of its biological characteristics has important value. We observed that different cultivars of rice have different levels of resistance to the brown planthopper (BPH), Nilaparvata lugens. In this study, transcriptome sequencing was used to analyze the differentially expressed genes (DEGs) of three rice varieties caused by BPH damage combined with physical stimulation and controls. We performed weighted correlation network analysis (WGCNA) and found a module positively related to physical stimulation. KEGG analysis showed that this module is strongly related to the ribosome pathway. Through comparative analysis with controls, we found the differential genes of each cultivar after BPH damage; through trend analysis, we found the differential genes shared by the three varieties after BPH damage. The KEGG/GO enrichment analysis of these genes found that they are mainly functionally concentrated in signal transduction, redox reactions, etc. The results of this research will be helpful to study the molecular mechanism of the BPH-rice interaction, identify resistance genes, and facilitate further studies on molecular resistance breeding and pest control. Full article

Background: Yerba-mate (Ilex paraguariensis) is a perennial native tree from South America. Improper management of yerba-mate crops results in low yield. This work evaluated the recovery and the vegetative capacity of the crop after coppicing. Methods: A 2-year field observation approach was used and the study area was monitored from 2019 to 2021 in a 20-year-old yerba-mate crop with low yield. Drastic coppicing was used as a strategy, aiming to study the effect of the month and the height of pruning. Four groups were defined combining the trunk heights of 10 and 40 cm and the months of pruning June and August. Results: Yerba-mate plants showed a low mortality rate of 2%. In the first year after the intervention, the height of the cutting was the most important factor that influenced the amount of primary and secondary branches, validating response surfaces with r² values of 0.9942 and 0.9084, respectively. In the second year of the experiment, full recovery in productivity was reached, with a mean rise of 109.7% in the plants of the group coppiced in June 40 cm above the soil. Conclusion: The techniques used in this study are appropriate for vigor recovery in yerba-mate plants inadequately managed and allow a new architecture on plants, enabling mechanical harvesting. Full article

Adapting agricultural systems to face persistent environmental hazards is at the center of global concerns. In line with this, understanding and highlighting the structural characteristics of agroforestry systems could strengthen their resilience in terms of disease management. This study was conducted to evaluate the effect of shade on the intensity of citrus leaf and fruit spot disease caused by Pseudocercospora (PLFSD). Investigations to assess the effects of shade components on the incidence of PLFSD were carried out on 15-year-old tangerine trees in a cocoa-based agroforestry plot (Bokito) during four fruits seasons. Tangerines under the shade of large forest trees were compared to others located under full sunlight. A complementary experiment was conducted on young grapefruit plants in an orchard with mango and avocado groves in Foumbot. Three shading conditions, i.e., under avocado trees, under mango trees, and without shade, were explored. Data on shade and PLFSD incidence were collected and analyzed. Our findings show that PLFSD incidence was null on tangerine leaves from trees under shade compared to those under full sunlight. The same trends were observed in fruits under shade and under full sunlight. Disease incidence on grapefruit leaves was lower on trees under shade compared to those under full sunlight. In short, shade trees appear to constitute potential physical barriers to disease progression. This study also highlights disease spatial distribution as beyond 12 m of distance between neighboring trees, no spatial dependence of disease spread was observed. Management actions based on the distance between citrus trees and regulating shade are envisaged. Full article

Maize is the most represented grain crop on the world’s arable land. It is mostly grown using standard sowing at an inter-row distance of 70 cm. However, growing in two rows (double-row sowing) is increasingly common today. The aim of this research was to determine the influence of different spatial distributions of the same population of maize plants on the yield of maize grains in a larger range of the FAO maize hybrid maturing group. The experiment lasted 5 years and was set up at two locations in Jakšić (Požeško-Slavonia County) and Lužani (Brodsko-Posavina County). Maize sowing with standard sowing was carried out with a PSK OLT seed drill with an inter-row spacing of 70 cm, while double-row sowing was carried out with a MaterMacc Twin Row-2 seed drill in two rows spaced 22 cm apart in a zigzag arrangement and 48 cm apart between adjacent sowing furrows. In the experiment, a total of three types of maize hybrids were used: H1-Kashmir (FAO 390 maturing group), H2-Kapitolis (FAO 400 maturing group) and H3-Konfites (FAO 450 maturing group). With standard maize sowing, an average set of plants was achieved: 71,946 plants ha⁻¹ (Kashmir), 71,714 plants ha⁻¹ (Kapitolis) and 72,205 plants ha⁻¹ (Konfites), while the double-row sowing achieved a set of plants of 72,166 plants ha⁻¹, 72,104 plants ha⁻¹ and 72,576 plants ha⁻¹. The two-row sowing of the hybrid Kapitolis and Konfites recorded a statistically significant higher set of maize plants. The yield of maize grains in all three types of the hybrid was statistically and significantly higher by 943 kg ha⁻¹ using two-row sowing, and the highest yield was achieved by the Kashmir hybrid (13,406 kg ha⁻¹). Full article