Basic Statistics
Measure | Value |
---|---|
Filename | CerA58_reverse_paired.fq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 22885141 |
Sequences flagged as poor quality | 0 |
Sequence length | 50-150 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCGGGG | 710 | 0.0 | 22.523191 | 1 |
CTCGCTA | 6765 | 0.0 | 16.542995 | 9 |
CGCGTTT | 2335 | 0.0 | 15.186011 | 1 |
AGATCGG | 16100 | 0.0 | 13.125861 | 140-144 |
CGGGCAT | 6140 | 0.0 | 12.229701 | 1 |
CGCGTAT | 1565 | 0.0 | 11.995265 | 1 |
CGGGAAT | 12495 | 0.0 | 11.407172 | 1 |
GGAAAAT | 52220 | 0.0 | 11.34392 | 1 |
TCGCTAG | 4995 | 0.0 | 11.272119 | 9 |
CGCGTCT | 1365 | 0.0 | 11.205996 | 1 |
TCTCGCT | 10485 | 0.0 | 11.005143 | 8 |
CGCGGGA | 1270 | 1.8189894E-11 | 10.949308 | 1 |
CGCGAAT | 3005 | 0.0 | 10.874613 | 1 |
CGCCAAT | 9715 | 0.0 | 10.806737 | 1 |
CGCCCTT | 5945 | 0.0 | 10.759607 | 1 |
CGGGGAT | 5900 | 0.0 | 10.488138 | 1 |
GCCCGAT | 3920 | 0.0 | 10.46469 | 1 |
CAGATCG | 15525 | 0.0 | 10.305192 | 140-144 |
CGCCCAT | 6580 | 0.0 | 10.249585 | 1 |
CGGGGAC | 5775 | 0.0 | 10.233575 | 1 |