Basic Statistics
Measure | Value |
---|---|
Filename | CerB81_reverse_paired.fq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 21618075 |
Sequences flagged as poor quality | 0 |
Sequence length | 50-150 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCGGGG | 710 | 0.0 | 24.538317 | 1 |
CGGGCAT | 5605 | 0.0 | 16.90933 | 1 |
CGGGGAT | 5250 | 0.0 | 13.539541 | 1 |
AATCCGC | 5995 | 0.0 | 12.900587 | 5 |
CCCGCAT | 3000 | 0.0 | 12.543986 | 1 |
CGGGAAT | 9425 | 0.0 | 11.5347 | 1 |
AGATCGG | 11475 | 0.0 | 11.486185 | 140-144 |
CGCCTCT | 7230 | 0.0 | 11.277443 | 1 |
CGGGGTA | 2345 | 0.0 | 10.995678 | 1 |
CGCGGAT | 2370 | 0.0 | 10.879689 | 1 |
CGGGTAT | 4100 | 0.0 | 10.878254 | 1 |
CGAAAAC | 12605 | 0.0 | 10.780895 | 1 |
CGGGCGT | 1115 | 2.6611815E-9 | 10.625201 | 1 |
TCCGCTC | 5650 | 0.0 | 10.6053915 | 7 |
CCCGGCT | 2850 | 0.0 | 10.514454 | 1 |
CCCGGAT | 6570 | 0.0 | 10.501055 | 1 |
CGGGCTT | 4535 | 0.0 | 10.449481 | 1 |
CGGGCCC | 1025 | 9.440373E-8 | 10.198363 | 1 |
CGGGGGG | 1915 | 0.0 | 10.189487 | 1 |
CGCCCCT | 3365 | 0.0 | 10.147851 | 1 |