Basic Statistics
Measure | Value |
---|---|
Filename | CerB72_forward_paired.fq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 19008814 |
Sequences flagged as poor quality | 0 |
Sequence length | 50-150 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGGGCAT | 5225 | 0.0 | 16.29057 | 1 |
CGCGGGG | 540 | 6.4285086E-7 | 14.44908 | 1 |
CGCCCTT | 4885 | 0.0 | 12.923101 | 1 |
AATCCGC | 5250 | 0.0 | 11.88953 | 5 |
CGCACAT | 2985 | 0.0 | 11.881382 | 1 |
CGCGGTT | 1735 | 0.0 | 11.856044 | 1 |
CGCCCAT | 4690 | 0.0 | 11.645528 | 1 |
CGGGGAT | 4420 | 0.0 | 10.912593 | 1 |
CGCCCCT | 2955 | 0.0 | 10.8018055 | 1 |
CGGGAAT | 8890 | 0.0 | 10.771428 | 1 |
CGCCTAT | 2705 | 0.0 | 10.751224 | 1 |
CGGGCTT | 4225 | 0.0 | 10.744706 | 1 |
CCCGGCT | 2650 | 0.0 | 10.706695 | 1 |
CGCGTTT | 2005 | 0.0 | 10.613244 | 1 |
CCCGGTT | 5030 | 0.0 | 10.57632 | 1 |
CCCGCAT | 2470 | 0.0 | 10.338245 | 1 |
TCCGCTC | 4875 | 0.0 | 10.330588 | 7 |
AGATCGG | 10010 | 0.0 | 10.30868 | 140-144 |
TGCGCGC | 985 | 4.7103276E-7 | 10.081367 | 9 |
CCGGGAT | 5800 | 0.0 | 9.906 | 1 |