Basic Statistics
Measure | Value |
---|---|
Filename | CerA78_forward_paired.fq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 21951933 |
Sequences flagged as poor quality | 0 |
Sequence length | 50-150 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCGGGG | 580 | 0.0 | 23.241589 | 1 |
CTCGCTA | 5765 | 0.0 | 13.660198 | 9 |
CGGGCAT | 6110 | 0.0 | 12.7729645 | 1 |
CGCCCTT | 5625 | 0.0 | 11.477811 | 1 |
TCGCTAG | 4640 | 0.0 | 11.467706 | 9 |
CCCGCTT | 3815 | 0.0 | 10.972301 | 1 |
GGAAAAT | 52200 | 0.0 | 10.356778 | 1 |
CGGGTAT | 4560 | 0.0 | 10.26879 | 1 |
CGGGGGG | 2080 | 0.0 | 10.232885 | 1 |
CGCACAT | 3615 | 0.0 | 10.2055235 | 1 |
AGATCGG | 14200 | 0.0 | 10.073301 | 140-144 |
CGGGGAT | 6015 | 0.0 | 9.79 | 1 |
GGGAAAT | 29935 | 0.0 | 9.764684 | 1 |
CCGGGAT | 7240 | 0.0 | 9.701454 | 1 |
CGGGCAC | 3390 | 0.0 | 9.627164 | 1 |
CCCGCAT | 3340 | 0.0 | 9.558864 | 1 |
CGGGCCC | 1195 | 6.659502E-8 | 9.499315 | 1 |
CGCGGGA | 1345 | 4.2346073E-9 | 9.494901 | 1 |
GCCCGAT | 4035 | 0.0 | 9.494901 | 1 |
CGCCCAT | 5940 | 0.0 | 9.435846 | 1 |