Basic Statistics
Measure | Value |
---|---|
Filename | CerD22_forward_paired.fq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 23684235 |
Sequences flagged as poor quality | 0 |
Sequence length | 50-150 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCGGGG | 560 | 0.0 | 20.288183 | 1 |
CGCGTTT | 1995 | 0.0 | 13.169523 | 1 |
AGATCGG | 11920 | 0.0 | 12.319368 | 140-144 |
CGGGGAT | 5600 | 0.0 | 12.17291 | 1 |
CCCGCAT | 4045 | 0.0 | 11.586082 | 1 |
CGCCTCT | 6440 | 0.0 | 11.577496 | 1 |
CGGGCAT | 8950 | 0.0 | 11.504193 | 1 |
CGCCTAT | 2390 | 0.0 | 11.290078 | 1 |
CGGGCGT | 1145 | 2.564775E-10 | 11.162931 | 1 |
CGCGTAT | 1145 | 2.564775E-10 | 11.162931 | 1 |
CGGGGGT | 1760 | 0.0 | 10.489913 | 1 |
CGCCCAT | 6890 | 0.0 | 10.409104 | 1 |
CGGGGAC | 4955 | 0.0 | 10.318108 | 1 |
CTCGAAC | 12665 | 0.0 | 10.148096 | 1 |
CGCGTGT | 1050 | 1.02065314E-7 | 10.144092 | 1 |
CCCGCCT | 3945 | 0.0 | 10.079807 | 1 |
CGCCCCT | 3130 | 0.0 | 9.982045 | 1 |
CCCGCTT | 3285 | 0.0 | 9.943372 | 1 |
CGGGAAT | 10665 | 0.0 | 9.853989 | 1 |
CGGGCCT | 2550 | 0.0 | 9.7462845 | 1 |