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Article

Natural Corynanthe-Type Cholinesterase Inhibitors from Malaysian Uncaria attenuata Korth.: Isolation, Characterization, In Vitro and In Silico Studies

by
Nelson Jeng-Yeou Chear
1,†,
Tan Ai Fein Ching-Ga
1,†,
Kooi-Yeong Khaw
2,
Francisco León
3,
Wen-Nee Tan
4,
Siti R. Yusof
1,
Christopher R. McCurdy
5,
Vikneswaran Murugaiyah
1,6,* and
Surash Ramanathan
1,*
1
Centre for Drug Research, Universiti Sains Malaysia, Minden 11800, Penang, Malaysia
2
School of Pharmacy, Monash University Malaysia, Bandar Sunway 47500, Selangor, Malaysia
3
Department of Drug Discovery and Biomedical Sciences, College of Pharmacy, University of South Carolina, Columbia, SC 29201, USA
4
Chemistry Section, School of Distance Education, Universiti Sains Malaysia, Minden 11800, Penang, Malaysia
5
Department of Medicinal Chemistry, College of Pharmacy, University of Florida, Gainesville, FL 32610, USA
6
Discipline of Pharmacology, School of Pharmaceutical Sciences, Universiti Sains Malaysia, Minden 11800, Penang, Malaysia
*
Authors to whom correspondence should be addressed.
These authors contributed equally to this work.
Metabolites 2023, 13(3), 390; https://doi.org/10.3390/metabo13030390
Submission received: 31 December 2022 / Revised: 23 February 2023 / Accepted: 1 March 2023 / Published: 7 March 2023

Abstract

:
The Uncaria genus is notable for its therapeutic potential in treating age-related dementia, such as Alzheimer’s disease. A phytochemical study of the leaves of Malaysian Uncaria attenuata Korth., afforded an undescribed natural corynanthe-type oxindole alkaloid, isovillocarine D (1) together with two known indole alkaloids, villocarine A (2) and geissoschizine methyl ether (3), and their structural identification was performed with extensive mono- and bidimensional NMR and MS spectroscopic methods. The isolated alkaloids were evaluated for their acetylcholinesterase (AChE)- and butyrylcholinesterase (BChE)-inhibitory activity. The results indicated that compound (2) was the most potent inhibitor against both AChE and BChE, with IC50 values of 14.45 and 13.95 µM, respectively, whereas compounds (1) and (3) were selective BChE inhibitors with IC50 values of 35.28 and 17.65 µM, respectively. In addition, molecular docking studies revealed that compound (2) interacts with the five main regions of AChE via both hydrogen and hydrophobic bonding. In contrast to AChE, the interactions of (2) with the enzymatic site of BChE are established only through hydrophobic bonding. The current finding suggests that U. attenuata could be a good source of bioactive alkaloids for treating age-related dementia.

1. Introduction

Alzheimer’s disease (AD) is the most prevalent type of age-related dementia among the elderly, which is characterized by a progressive decline in cognitive function and memory [1,2]. The classical hallmarks of AD pathogenesis are the formation of extracellular amyloid-β plaques, the accumulation of abnormally phosphorylated tau at the intracellular level, and the progressive loss of cholinergic neurons [3,4,5]. Unfortunately, most clinical trials targeting a single protein target, such as Aβ and tau, have often failed [6]. Current clinically approved anti-AD drugs are mainly cholinesterase inhibitors, such as rivastigmine, donepezil, and galantamine (Figure S1) [7,8]. Cholinesterase inhibitors block the action of cholinesterase, increasing acetylcholine availability and, subsequently, its duration of action in the brains of AD patients, which is essential for arousal, attention, learning, memory, muscle activation, etc. [9,10]. Nonetheless, cholinesterase inhibitors are symptomatic treatments that neither halt the disease course nor reverse the disease progression [11,12]. Due to the limited cholinesterase inhibitors available clinically, the search for more effective ones is ongoing, including from plant sources.
The Uncaria genus (Rubiaceae family), which includes Uncaria rhynchopylla (Gou-Teng), is commonly used in traditional Chinese medicine to treat cardiovascular and central nervous system disorders [2,13]. The main neuroprotective compounds in the Uncaria species are corynanthe-type indole and oxindole alkaloids such as rhynchophylline, isorhynchophylline, corynoxeine, isocorynoxeine, corynoxine, geissoschizine methyl ether, hirsuteine, and hirsutine (Figure S2a), which have been shown to have anti-amyloid aggregation, anti-tau hyperphosphorylation, anti-neuroinflammation, anti-aging, and cholinesterase-inhibitory activities, among others [13,14,15,16].
In our continuous effort to search for novel cholinesterase inhibitors from Malaysian Rubiaceous plants, the methanolic leaf extract of Uncaria attenuata Korth. has shown promising cholinesterase-inhibitory activity. Uncaria attenuata (also known as Uncaria salaccinesis or Uncaria bulusanensis) is a rare Uncaria species native to the Malay Archipelago (Peninsular Thailand, Malaysia, Indonesia, and the Philippines) [17,18]. A chemical investigation of U. attenuata was carried out between 1970 and 1997, of which the plant materials were collected from different localities in Thailand and Indonesia. Several common corynanthe- and heteroyohimbine-type alkaloids have been reported from the leaves of U. attenuata, including hirsuteine, hirsutine, rhynchophylline, isorhynchopylline, corynoxine B, mitraphylline, isomitraphylline, 3-isoajmalicine, tetrahydroalstonine, and rauniticine. However, the alkaloid profiles were greatly influenced by geographical origins [17,18,19]. In addition, four unusual D-secocorynanthe-type oxindole alkaloids—salacin, 3-oxo-7-hydroxy-3,7-secorhynchophylline, Us-7, and Us-8—were isolated from the stem and hook of Thai U. attenuata, which are exclusive to this species [20,21] (Figure S2b). These alkaloids with an opened D-ring were formed by an oxidative cleavage at the enamine double bond (C20–C21) of strictosidine aglycone intermediate during the biosynthesis process [21]. Yet, the potential neuroprotective activities of U. attenuata and its alkaloids are unknown. All these have sparked our interest in isolating and evaluating the cholinesterase-inhibitory activity of the alkaloid constituents from the leaves of Malaysian U. attenuata.

2. Materials and Methods

2.1. The General Experimental Procedures

Column chromatography was carried out on silica gel (230–400 mesh; Merck, Darmstadt, Germany). TLC (silica gel 60 F254, Merck, Darmstadt, Germany) was used to monitor fractions from column chromatography. Preparative TLC was performed on silica gel 60 F254 (20 cm × 20 cm, 0.5 mm; Merck, Darmstadt, Germany). Visualization of the TLC plates was achieved with a UV lamp (λ = 254 and 365 nm). Optical rotations were obtained utilizing a JASCO P-1010 polarimeter. Circular dichroism (CD) absorption spectra were recorded using a Jasco J-815 spectropolarimeter. 1H and 13C NMR spectra were obtained on Bruker model AMX 500 NMR spectrometers with standard pulse sequences, operating at 500 MHz in 1H and 125 MHz in 13C. The chemical shift values were reported in parts per million units (ppm) from trimethylsilane (TMS) using known solvent chemical shifts. Coupling constants were recorded in hertz (Hz). Standard pulse sequences were used for COSY, HMQC, HMBC, NOESY, and DEPT. High-resolution mass spectrum (HR-MS) was measured on a Waters Xevo G2-XS QTof quadrupole time-of-flight mass spectrometer (Waltham, MA, USA). Gas chromatography–mass spectra (GC-MS) were measured on an Agilent 6890 N Network GC system coupled to an Agilent 5973i mass selective detector (Agilent Technologies, Waldbronn, Germany). IR spectra were recorded by KBr using Perkin Elmer (Waltham, MA, USA) 2000 FT-IR spectrophotometer. Melting points were determined using a Stuart Scientific Melting Point SMP 1 (Staffordshire, UK) and were uncorrected. UV spectra were recorded on a Shimadzu UV-1800 spectrophotometer (Kyoto, Japan). The absorbance for AChE and BChE inhibitory assay was recorded on a Thermo Scientific Multiskan Go microplate reader (Waltham, MA, USA).

2.2. Chemicals and Reagents

Hexane, chloroform (CHCl3), ethyl acetate (EtOAc), and methanol (MeOH) used for the extraction and isolation of alkaloids were of analytical grade (Merck, Darmstadt, Germany). Reagents used for acid–base extraction were glacial acetic acid, anhydrous sodium sulfate, and ammonium hydroxide from Merck (Darmstadt, Germany). For the cholinesterase inhibitory assay, acetylthiocholine iodide and acetylcholinesterase from electric eel, bovine serum albumin, 5,5′-dithiobis (2-nitrobenzoic acid), and butyrylcholinesterase from equine serum, and S-butyrylthiocholine chloride and physostigmine were purchased from Sigma-Aldrich (St. Louis, MO, USA).

2.3. Plant Material

The leaves of Uncaria attenuata Korth. (Rubiaceae) were collected from Bukit Kledang, Ipoh, Perak, Malaysia (4°34′18.7763″ N, 101°1′39.4139″ E). The taxonomical identity of the plant was authenticated by Dr. Ooi Im Hin, a botanist from Penang Botanic Gardens, Malaysia. A voucher specimen (no. TAF 1) was then deposited at the herbarium of Penang Botanic Gardens.

2.4. Extraction of Plant Material

The air-dried and powdered leaf material (300 g) was extracted with MeOH (1:15 w/v) using a 5 L Soxhlet extractor for 48 h. The obtained supernatant was filtered and evaporated to dryness in vacuo to yield a crude MeOH extract (70 g). The MeOH extract was then subjected to acid–base extraction to enrich the alkaloid constituents. Briefly, the MeOH extract was partitioned between hexane (3 × 1 L) and 10% CH3COOH. The acidic aqueous layer was then adjusted to pH 9.0 with 25% NH4OH and extracted with CHCl3 (5 × 1 L). The CHCl3-soluble portion was washed with distilled water, dried over anhydrous sodium sulfate, and evaporated in vacuo to yield a crystalline alkaloid extract (2.5 g).

2.5. Alkaloid Isolation and Identification

The alkaloid extract (2.5 g) was subjected to vacuum liquid chromatography on a silica gel (5 cm × 18 cm) using a step gradient of hexane-EtOAc-MeOH (50:50:0 to 0:0:100, v/v/v) to yield six fractions (Fr. 1–Fr. 6). F3 (200 mg) was further separated by using silica gel column chromatography (hexane-EtOAc-MeOH 20:80:0 to 0:90:10, v/v/v) to afford four subfractions (SFr. 3a, 3b, 3c, and 3d). SFr. 3b (20 mg) was then purified using preparative TLC (EtOAc-MeOH 9:1, v/v) to yield villocarine A (2) (8 mg; TLC Rf 0.50) and geissoschizine methyl ether (3) (3 mg; TLC Rf 0.63). Next, Fr. 4 (200 mg) was repeatedly purified by silica gel CC to afford isovillocarine D (1) (9 mg). Spectroscopic and spectrometric data for the known compounds (2) and (3) agreed with that reported in the literature [22,23].
Isovillocarine D (1): white amorphous powder; [α] 18 D +17.1 (c 0.00058, MeOH); mp 157.5–150.0 °C; +HRESI-MS: m/z 383.1830 [M + H]+, calculated for C22H27N2O4, 383.1893; UV λmax (nm): 204.5, 243.0, 288.0. IR (film, KBr) νmax 3254, 2946, 1708, 1639, 1621, 1471, 1246, 1146 cm−1; 1H and 13C NMR data, see Table 1.

2.6. Cholinesterase Inhibitory Assay

The cholinesterase-inhibitory potential of the extracts and isolated compounds was determined using the spectrophotometric method described by Ellman et al. (1961) [24]. The assay procedure was the same as reported in our previous publications [25,26].

2.7. Molecular Docking

Molecular docking was performed only for the most active compound—villocarine A (2)—using Autodock 3.0.5 (La Jolla, CA, USA) along with AutoDockTools (ADT) to get insight into the molecular interactions and bonding affinities of the molecule in the active sites of the AChE and BChE enzymes following the method described in our previous publication [25]. Compound 2 was built using Hyperchem 8, and energy minimization was performed with a convergence criterion of 0.05 kcal/(mol A). The proper protein crystal structures of AChE from Torpedo californica in complex with galanthamine (PDB ID: 1W6R) and BChE from Homo sapiens (PDB ID: 2WIJ) were obtained from Protein Data Bank. For each docking experiment, one hundred independent dockings were carried out, and the lowest docked energy of each conformation in the most populated cluster was selected.

3. Results and Discussion

3.1. Structure Elucidation of Uncaria Attenuata Alkaloids 13

Screening data showed that the U. attenuata leaf extract exhibited potential inhibitory action against AChE and BChE enzymes with IC50 values below 50 µg/mL (Table 2). The alkaloid constituents were then enriched using acid–base extraction method and subjected to multiple-column chromatography to afford an undescribed oxindole alkaloid—isovillocarine D (1)—and two known indole alkaloids—villocarine A (2) and geissoschizine methyl ether (3). The chemical structure of these alkaloids was established based on multiple spectroscopic methods, such as UV, IR, ECD, EI-MS, ESI-MS, and NMR (Figure 1). The spectroscopic data of compounds (13) are provided in Table 1 and Supplementary Data (Figures S3–S21 and Tables S1 and S2). The stereochemical configuration of (2) at C3 and C15 were confirmed as R and S, respectively, based on NOE correlations and biogenesis considerations, as well as ECD analysis. The ECD spectrum of (2) showed a negative Cotton effect at 250–300 nm corresponding to the β orientation at H-3 (i.e., speciociliatine) (Figure S18) [27]. Compound (3) was identified as geissoschizine methyl ether, which is the 3S epimer of (2) based on the deshielded C3 signal at δc 58.9 (corresponded to δH 3.56) compared to (2) (δc 56.0, corresponded to δH 3.72) (Tables S1 and S2) [27,28]. This was further supported by the EI-MS fragmentation pattern of (3) (Figure S19), in which the M-CH3 fragment (m/z 351) was less intense than the M+ ion (m/z 366), in contrast to the EI-MS fragments observed for (2) (3R) (Figure S14) [28,29]. Notably, compounds (13) were reported for the first time in the leaves of U. attenuata native to Malaysia. The isomeric compounds (2) and (3) can also be found in the leaves of Uncaria villosa and the hooks of Uncaria rhynchophylla [22,30].
Isovillocarine D (1) was isolated as a white amorphous powder. Compound (1) had the molecular formula C22H26N2O4 deduced from the 13C NMR data and a pseudo molecular ion at m/z 383.1830 [M + H]+ (calculated for C22H27N2O4, 383.1893) in the HR-ESIMS, which was in consistency with 11 degrees of unsaturation. The 1H NMR data (Table 1) indicated compound (1) possessed an oxindole moiety with an indolic proton (NH) at δH 7.48 (1H, s); an ortho-disubstituted aromatic system at δH 7.41 (1H, br d, J = 7.8 Hz, H-9), 6.83 (1H, br. d, J = 7.8 Hz, H-12), 7.19 (1H, td, J = 7.8, 1.0 Hz, H-11), and 7.02 (1H, td, J = 7.8, 1.0 Hz, H-10) in conjunction with the 13C NMR data (δC 181.5 (C-2), 139.9 (C-13), 133.1 (C-8), 127.5 (C-11), 125.5 (C-9), 122.4 (C-10), and 56.7 (C-7)); and a β-methoxy acrylate moiety at δH 7.25 (1H, s, H-17), 3.66 (3H, s, OCH3-22), and 3.76 (3H, s, OCH3-17) in conjunction with the 13C NMR signals at δC 168.7 (C-22), 158.7 (C-17), 111.9 (C-16), 61.4 (OCH3-17), and 51.3 (OCH3-22). The above signals, including the typical carbonyl carbon at δC 181.5 (C-2) (Figure 2a), suggested that compound (1) is a corynanthe-type oxindole alkaloid like that of corynoxine isolated from Mitragyna speciosa [27,31]. The 13C NMR and HSQC data (Table 1 and Figures S7 and S12) indicated that compound (1) had 22 carbon signals, including the above-mentioned carbon signals, and an additional 9 carbon signals: 4 methylenes (δc 60.4 (C-21), 54.6 (C-5), 35.4 (C-6), and 31.8 (C-14)), 2 methines (δC 68.4 (C-3) and 30.5 (C-15)), 1 methyl (δC 13.1 (C-18)), and 1 extra double bond (δC 135.1 (C-20) and 121.8 (C-19)). A comparison of 1H and 13C NMR spectra of both (1) and corynoxine (Figure S2a) indicated that the typical signals of an ethyl side chain at position C-20 were missing in (1) [28,29]. However, a Δ19(20) olefinic moiety and a deshielded methyl group can be observed at δH 5.41 (q, J = 6.7 Hz, H-19); δC 121.8 (C-19) and 135.1 (C-20) and δH 1.52 (dd, J = 6.8, 1.8 Hz, H-18); δC 13.1 (C-18), suggesting the presence of an ethylidene side chain in (1) [22,23]. The assigned 1H and 13C NMR data of (1) were further supported by the 2D NMR experiments: 1H-1H COSY and HMBC (Figure 2a). The location of the ethylidene side chain was established by the HMBC correlations observed for H-19 with C-15, C-18, and C-21 and H-18 with C-20 and C-19. The HMBC correlations of H-15 with C-16, C-17, and C-22 indicated that the β-acrylate chain was substituted at position 15, which is one of the characteristic features of corynanthe-type alkaloids [31].
The configuration of (1) at C-3, C-7, and C-15 can be readily deduced from the 2D NOESY experiment (Figure 2b). In the experiment, H-15 (δH 3.84) showed spatial correlations with CH3-18 (δH 1.52) and H-14b (δH 1.28) and, subsequently, H-14b with H-3 (δH 2.75), and H-3 with H-21b (δH 3.32) and H-5b (δH 2.52). Following the biogenesis theory of corynanthe-type alkaloids, H-15 naturally occurs in the α-orientation, thus, indicating that all the above-correlated protons were on the same plane (α-orientation) [32,33,34]. The NOE correlation of H-15 with H3-18 also suggested that the geometry of the ethylidene side chain was in the (E)-configuration [23]. On the other hand, H-5a (δH 3.36) exhibited NOE correlations with H-6b (δH 2.08) and H-21a (δH 3.54) and, subsequently, H-21a with H-19 (δH 5.41), indicating these correlated protons were in the β-orientation. The relative configuration of the spiro-carbon, C-7, was assigned to be S based on the NOE correlations of H-9 with H-14βH 1.32) and H-6βH 2.08), which indicated that both H-14β and H-6β of (1) were located within the shielding zone of the aromatic ring [35] (Figure 2b). Therefore, the structure of isovillocarine D (3S,7S,15S) was established as (1) (Figure 1), which is an undescribed 7S-epimer of villocarine D isolated from Uncaria villosa [23]. This proposed structure of (1) was further supported by the downshift of C-3 (δc 68.4) as well as the upshift of H-14β by 1.2 ppm (δH 1.32) compared to villocarine D (7R) (H-14β, δH 2.52; C-3, δc 65.8) [23,35].

3.2. Cholinesterase-Inhibitory Activity

The total alkaloid extract of U. attenuata and the two major alkaloids, isovillocarine D (1) and villocarine A (2), and the minor alkaloid, geissoschizine methyl ether (3), were evaluated for their inhibition against AChE and BChE enzymes. The total alkaloid extract inhibited both enzymes with IC50 values of 8.90 and 21.74 µg/mL, respectively, which were about two times more potent than the origin methanolic extract (Table 2). Among the tested alkaloids, compound (2) displayed the most potent inhibitory effect against both AChE and BChE with IC50 values of 14.45 and 13.95 µM, respectively, regarded as a dual cholinesterase inhibitor (selectivity index ≈ 1). On the other side, compounds (3) and (1) were found to be moderate but selective BChE inhibitors (IC50 17.65 and 35.28 µM, respectively). The dose-dependent curve of extracts and individual alkaloids against AChE and BChE are provided in the Supplementary Materials (Supplementary Figures S22 and S23). Surprisingly, all the isolated compounds showed better selectivity toward BChE than AChE, which differed from the methanolic and alkaloid-enriched extracts. This suggested that the anti-AChE activity of U. attenuata extracts was possibly due to the synergistic effects among the alkaloid constituents.
A closer study of their structure–inhibition correlations revealed that the H-3β position at the indole C/D ring of (2) is critical for AChE inhibition, as evidenced by the higher IC50 value observed for its 3S-epimer (3), which was about three times higher than (2). Remarkably, a loss of anti-AChE activity was observed when the indole ring (3) was oxidized to form the spirocyclic oxindole (1), suggesting that the indole moiety is essential for inhibiting the enzyme. For BChE, both compounds (2) and (3) inhibited the enzyme with similar IC50 values, demonstrating that the chirality at C-3 has little to no effect on BChE inhibition. Like the AChE enzyme, the anti-BChE activity of (1) was cut in half compared to the IC50 value of (3). This showed that indole moiety is also preferable for BChE inhibition. The lack of anticholinesterase activity in corynanthe-type oxindole alkaloids was supported by other published data, in which rhynchophylline, isorhynchophylline, corynoxeine, and isocorynoxeine had no inhibition on AChE and BChE enzymes, even when tested at 100 µg/mL [36,37,38].

3.3. Molecular Docking Study

The binding interactions between the most potent compound—compound (2)—and both AChE and BChE enzymes were evaluated in silico. The free energy of binding (FEB) of (2) with AChE was slightly higher than BChE, which correlated with the IC50 values obtained (Table 3). In silico analysis showed that the β-methoxy acrylate moiety of (2) interacted with key amino acids of AChE at the oxyanion hole (Gly 118 and Ala 201) via hydrogen bonding. Further, (2) was predicted to interact with the key residues of the choline-binding site and acyl-binding pocket of AChE through hydrophobic interactions. Multiple π–alkyl interactions were observed between Trp 84 with indole C-ring, D-ring, and the C20-ethylidene chain of (2), which further substantiates the importance of the indole moiety and C20-ethylidene group in inhibiting AChE (Figure 3a). On the other hand, only the hydrophobic interaction of (2) with the choline-binding site, catalytic side, and oxyanion hole may explain the higher FEB with BChE. Similar to AChE, the interactions of (2) with the key amino acids within the BChE pocket were mainly established through its indole moiety and C20-ethylidene group (Figure 3b).

4. Conclusions

The present study reported the cholinesterase-inhibitory activity of U. attenuata and its alkaloid constituents for the first time. A new corynanthe-type oxindole alkaloid and two known indole alkaloids were isolated and characterized from the leaves of Malaysian U. attenuata. The new oxindole alkaloid was identified as isovillocarine D (3S,7S,15S) (1) using various modern spectroscopic analyses. All the isolated compounds (13) showed moderate to weak cholinesterase inhibition with IC50 values lower than 50 µM. Compound (2) had the most potent inhibitory activity against both AChE and BChE, with IC50 values of 14.45 and 13.94 µM, respectively, followed by compounds (3) and (1). In terms of selectivity, compound (2) is a dual inhibitor (selectivity ≈ 1), whereas (1) and (3) are selective BChE inhibitors. Molecular docking studies showed that (2) interacted with the active site of AChE and BChE mainly by forming hydrogen and hydrophobic bonds between the key amino acids and the indole moiety and ethylidene side chain. Overall, corynanthe-type indole alkaloids from U. attenuata showed potential inhibitory activity on AChE and BChE. The plant could be a good source for searching for new cholinesterase inhibitors.

Supplementary Materials

The following supporting information can be downloaded at: https://www.mdpi.com/article/10.3390/metabo13030390/s1, Figure S1: Examples of clinically approved cholinesterase inhibitors; Figure S2: (a) Common corynanthe-type neuroprotective alkaloids found in Uncaria species; (b) unusual D-secocorynanthe-type oxindole alkaloids from the stems and hooks of Thai Uncaria attenuata; Figure S3: UV spectrum of compound (1); Figure S4: Q-ToF-ESI-MS spectrum of compound (1); Figure S5: IR spectrum of compound (1); Figures S6–S13: 1D and 2D NMR spectra of compound (1); Figure S14: EI-MS spectrum of compound (2); Figures S15–S16: 1D NMR spectra of compound (2); Figure S17: EI-MS spectrum of compound (3); Figure S18: ECD spectrum of compound (2); Figure S19: EI-MS spectrum of (3); Figures S20–S21: 1D NMR spectra of compound (3); Figure S22: The dose-dependent curve of (a) methanol and alkaloid extracts, and (b) compounds (2) and (3) against acetylcholinesterase (AChE); Figure S23: The dose-dependent curve of (a) methanol and alkaloid extracts, and (b) compound (13) against butyrylcholinesterase (BChE). Table S1: 1D NMR data of compound (2); Table S2: 1D NMR data of compound (3).

Author Contributions

Conceptualization, V.M. and S.R.; methodology, N.J.-Y.C., T.A.F.C.-G., K.-Y.K. and F.L.; formal analysis, W.-N.T. and K.-Y.K.; writing—original draft preparation, N.J.-Y.C. and T.A.F.C.-G.; writing—review and editing, F.L., S.R.Y. and V.M.; supervision, C.R.M., V.M. and S.R.; project administration, N.J.-Y.C. and F.L.; funding acquisition, V.M. and S.R. All authors have read and agreed to the published version of the manuscript.

Funding

This research was funded by Universiti Sains Malaysia and the Malaysian Ministry of Higher Education under the Research University (RU) grant (1001.CDADAH.8011024) and HICoE programme (311/CDADAH/4401009), respectively. The research was partly supported by start-up funds from the College of Pharmacy, the University of South Carolina, USA, as well as the NIH grant (5P20GM109091).

Institutional Review Board Statement

Not applicable.

Informed Consent Statement

Not applicable.

Data Availability Statement

The data presented in this study are available in the article and Supplementary Materials.

Acknowledgments

The authors would like to acknowledge the Universiti Sains Malaysia (USM), and the Malaysian Ministry of Higher Education for sponsoring the study under the Research University (RU) grant with project code 1001.CDADAH.8011024 and HICoE programme (311/CDADAH/4401009), respectively. F.L. thanks the College of Pharmacy, the University of South Carolina, and NIH for start-up funds and NIH grant (5P20GM109091). The authors thank both Universiti Sains Malaysia and the University of South Carolina for their facilities and support.

Conflicts of Interest

The authors declare no conflict of interest.

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Figure 1. Chemical structure of compounds (13) isolated from the leaves of Malaysian Uncaria attenuata.
Figure 1. Chemical structure of compounds (13) isolated from the leaves of Malaysian Uncaria attenuata.
Metabolites 13 00390 g001
Figure 2. (a) Selected COSY and HMBC and (b) selected NOE correlations of compound (1) (most stable conformation, Chemdraw3D).
Figure 2. (a) Selected COSY and HMBC and (b) selected NOE correlations of compound (1) (most stable conformation, Chemdraw3D).
Metabolites 13 00390 g002
Figure 3. Binding orientations and interactions of compound (2) with protein residues at the active site of (a) acetylcholinesterase and (b) butyrylcholinesterase.
Figure 3. Binding orientations and interactions of compound (2) with protein residues at the active site of (a) acetylcholinesterase and (b) butyrylcholinesterase.
Metabolites 13 00390 g003
Table 1. 1D and 2D NMR data of compound (1).
Table 1. 1D and 2D NMR data of compound (1).
Compound (1)
Position1H [δH (J, Hz)]13C (δc)HMBC 1H to 13CNOESY 1H to 1H
NH7.48 [br s (1H)]-7, 8-
2-181.5--
32.75 [dd (1H, 11.9, 2.6)]68.485b, 14b, 21b
5a3.36 [overlapped (1H)]54.63, 76b, 21a
5b2.52 [q (1H, 8.9)]6, 213
6a2.42 [ddd (1H, 9.2, 2.2)]35.42, 5-
6b2.08 [m (1H)]85a, 9
7-56.7--
8-133.1--
97.41 [br d (1H, 7.8)]125.57, 11, 136b, 14a
107.02 [td (7.8, 1.0)]122.48, 12-
117.19 [td (1H, 7.8, 1.0)]127.59, 13-
126.83 [br d (1H, 7.8)]109.18, 10-
13-139.9--
14a1.32 [s (1H)]31.86, 15, 16-
14b1.28 [s (1H)]3, 5, 15, 203, 15, 21b
153.84 [d (1H, 6.9)]30.53, 14, 16, 17, 19, 20, 21, 2214b, 18, 21b
16-111.9--
177.25 [s (1H)]158.715, 16, OCH3-17, 22OCH3-17
181.52 dd [(3H, 6.8, 1.8)]13.119, 2015
195.41 [q (1H, 6.7)]121.815, 18, 2121a
20-135.1--
21a3.54 [br d (1H, 12.4)]60.43, 15, 19, 205a, 19
21b3.32 [overlapped (1H)]3, 19, 203, 14b, 5b
22-168.7--
OCH3-223.66 [s (3H)]51.322-
OCH3-173.76 [s (3H)]61.41717
Table 2. Cholinesterase-inhibitory activity of Uncaria attenuata and its isolated compounds (13).
Table 2. Cholinesterase-inhibitory activity of Uncaria attenuata and its isolated compounds (13).
SamplesAChEBChESelectivity Index
% Inhibition at 100 µMIC50, µMIC50, µg/mL% Inhibition at 100 µMIC50, µMIC50, µg/mLAChE aBChE b
Methanol extract *--16.46 ± 2.30--46.32 ± 1.172.810.36
Alkaloid extract *--8.90 ± 2.43--21.74 ± 4.342.440.41
Compound (1)22.11 ± 3.23--87.44 ± 1.3435.38 ± 5.6013.51--
Compound (2)75.55 ± 2.6114.45 ± 2.945.2995.80 ± 2.3313.94 ± 2.695.100.971.04
Compound (3)81.53 ± 1.4540.55 ± 0.9114.8490.75 ± 3.5617.64 ± 0.586.450.432.30
Galantamine HBr-0.94 ± 0.120.35-30.41 ± 1.1111.2032.350.03
All data are expressed as mean ± standard deviation (n = 3). * IC50 values of extracts are expressed as µg/Ml. a Selectivity for AChE is defined as IC50(BChE)/IC50(AChE). b Selectivity for BChE is defined as IC50(AChE)/IC50(BChE).
Table 3. Binding interaction data for compound (2) docked into active site gorge of TcAChE and hBChE.
Table 3. Binding interaction data for compound (2) docked into active site gorge of TcAChE and hBChE.
Binding Energy (kcal)ResidueType of InteractionDistance (Å)Interaction Sites
TcAChE−13.40Trp 84Pi–alkyl4.40Choline-binding site
Pi–alkyl5.00
Pi–alkyl5.30
Gly 118H-bond1.98Oxyanion hole
Ala 201H-bond2.69Oxyanion hole
Phe 290Pi–alkyl4.74Acyl-binding pocket
Phe 288Pi–alkyl4.96Acyl-binding pocket
hBChE−11.21Trp 82Pi–sigma3.68Choline-binding site
Pi–alkyl5.22
Pi–alkyl4.17
His 438Pi-alkyl5.46Catalytic site
Pi-cation5.76
Ala 199Pi-alkyl4.65Oxyanion hole
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MDPI and ACS Style

Chear, N.J.-Y.; Ching-Ga, T.A.F.; Khaw, K.-Y.; León, F.; Tan, W.-N.; Yusof, S.R.; McCurdy, C.R.; Murugaiyah, V.; Ramanathan, S. Natural Corynanthe-Type Cholinesterase Inhibitors from Malaysian Uncaria attenuata Korth.: Isolation, Characterization, In Vitro and In Silico Studies. Metabolites 2023, 13, 390. https://doi.org/10.3390/metabo13030390

AMA Style

Chear NJ-Y, Ching-Ga TAF, Khaw K-Y, León F, Tan W-N, Yusof SR, McCurdy CR, Murugaiyah V, Ramanathan S. Natural Corynanthe-Type Cholinesterase Inhibitors from Malaysian Uncaria attenuata Korth.: Isolation, Characterization, In Vitro and In Silico Studies. Metabolites. 2023; 13(3):390. https://doi.org/10.3390/metabo13030390

Chicago/Turabian Style

Chear, Nelson Jeng-Yeou, Tan Ai Fein Ching-Ga, Kooi-Yeong Khaw, Francisco León, Wen-Nee Tan, Siti R. Yusof, Christopher R. McCurdy, Vikneswaran Murugaiyah, and Surash Ramanathan. 2023. "Natural Corynanthe-Type Cholinesterase Inhibitors from Malaysian Uncaria attenuata Korth.: Isolation, Characterization, In Vitro and In Silico Studies" Metabolites 13, no. 3: 390. https://doi.org/10.3390/metabo13030390

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