Cranggenome - 33 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00001_unitig_.. (original name was: unitig_265|quiver|quiver)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	T1PKS	51,551	91,181
Region 1.2	terpene	784,424	805,115	pyranonigrin E	Polyketide	100%
Region 1.3	T1PKS	1,250,684	1,310,573
Region 1.4	T1PKS	1,444,326	1,493,097

c00002_unitig_.. (original name was: unitig_0|quiver|quiver)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	T1PKS	592,340	637,516
Region 2.2	T1PKS	1,778,193	1,823,979	naphthalene	Polyketide	22%

c00003_unitig_.. (original name was: unitig_1|quiver|quiver)

Region	Type	From	To
Region 3.1	T1PKS	49,787	66,265
Region 3.2	T1PKS	627,627	663,011
Region 3.3	T1PKS	1,707,529	1,751,744

c00004_unitig_.. (original name was: unitig_4|quiver|quiver)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	NRPS-like	396,879	440,134

c00005_unitig_.. (original name was: unitig_299|quiver|quiver)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	T1PKS	372,319	419,275

c00006_unitig_.. (original name was: unitig_5|quiver|quiver)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	T1PKS	444,951	493,272
Region 6.2	NRPS-like	1,010,511	1,052,223

c00009_unitig_.. (original name was: unitig_8|quiver|quiver)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	NRPS-like	39,438	82,916
Region 9.2	T1PKS	618,435	666,874

c00010_unitig_.. (original name was: unitig_244|quiver|quiver)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	terpene	61,137	83,381	squalestatin S1	Terpene	40%
Region 10.2	T1PKS	188,522	236,159

c00013_unitig_.. (original name was: unitig_15|quiver|quiver)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	T1PKS	190,190	255,643	hypothemycin	Polyketide	60%

c00014_unitig_.. (original name was: unitig_27|quiver|quiver)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	T1PKS	714,826	761,457	naphthalene	Polyketide	22%

c00015_unitig_.. (original name was: unitig_22|quiver|quiver)

Region	Type	From	To	Most similar known cluster		Similarity
Region 15.1	terpene,T1PKS,NRPS	719,187	805,485	phyllostictine A / phyllostictine B	NRP + Polyketide	30%

c00017_unitig_.. (original name was: unitig_10|quiver|quiver)

Region	Type	From	To	Most similar known cluster		Similarity
Region 17.1	T1PKS	182,519	230,293	4-epi-15-epi-brefeldin A	Polyketide:Iterative type I	30%

c00021_unitig_.. (original name was: unitig_28|quiver|quiver)

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	T1PKS	186,225	233,905

c00024_unitig_.. (original name was: unitig_279|quiver|quiver)

Region	Type	From	To	Most similar known cluster		Similarity
Region 24.1	T1PKS	204,666	259,114

c00029_unitig_.. (original name was: unitig_11|quiver|quiver)

Region	Type	From	To	Most similar known cluster		Similarity
Region 29.1	NRPS-like	261,566	304,383

c00033_unitig_.. (original name was: unitig_48|quiver|quiver)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	NRPS-like	196,152	231,505
Region 33.2	T1PKS,NRPS	388,772	434,905	pyranonigrin E	Polyketide	100%

c00034_unitig_.. (original name was: unitig_241|quiver|quiver)

Region	Type	From	To	Most similar known cluster		Similarity
Region 34.1	T1PKS,NRPS	202,591	263,110

c00038_unitig_.. (original name was: unitig_62|quiver|quiver)

Region	Type	From	To	Most similar known cluster		Similarity
Region 38.1	T1PKS	308,530	368,481	depudecin	Polyketide:Iterative type I	50%

c00039_unitig_.. (original name was: unitig_67|quiver|quiver)

Region	Type	From	To	Most similar known cluster		Similarity
Region 39.1	T1PKS	97,347	141,320	alternariol	Terpene	100%

c00044_unitig_.. (original name was: unitig_243|quiver|quiver)

Region	Type	From	To	Most similar known cluster		Similarity
Region 44.1	NRPS	273,028	313,330

c00047_unitig_.. (original name was: unitig_63|quiver|quiver)

Region	Type	From	To	Most similar known cluster		Similarity
Region 47.1	T1PKS	37,212	82,812

c00054_unitig_.. (original name was: unitig_51|quiver|quiver)

Region	Type	From	To	Most similar known cluster		Similarity
Region 54.1	T3PKS,T1PKS	3,281	54,054

c00067_unitig_.. (original name was: unitig_106|quiver|quiver)

Region	Type	From	To	Most similar known cluster		Similarity
Region 67.1	NRPS	47,954	93,376

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	T1PKS	51,551	91,181
Region 1.2	terpene	784,424	805,115	pyranonigrin E	Polyketide	100%
Region 1.3	T1PKS	1,250,684	1,310,573
Region 1.4	T1PKS	1,444,326	1,493,097
Region 2.1	T1PKS	592,340	637,516
Region 2.2	T1PKS	1,778,193	1,823,979	naphthalene	Polyketide	22%
Region 3.1	T1PKS	49,787	66,265
Region 3.2	T1PKS	627,627	663,011
Region 3.3	T1PKS	1,707,529	1,751,744
Region 4.1	NRPS-like	396,879	440,134
Region 5.1	T1PKS	372,319	419,275
Region 6.1	T1PKS	444,951	493,272
Region 6.2	NRPS-like	1,010,511	1,052,223
Region 9.1	NRPS-like	39,438	82,916
Region 9.2	T1PKS	618,435	666,874
Region 10.1	terpene	61,137	83,381	squalestatin S1	Terpene	40%
Region 10.2	T1PKS	188,522	236,159
Region 13.1	T1PKS	190,190	255,643	hypothemycin	Polyketide	60%
Region 14.1	T1PKS	714,826	761,457	naphthalene	Polyketide	22%
Region 15.1	terpene,T1PKS,NRPS	719,187	805,485	phyllostictine A / phyllostictine B	NRP + Polyketide	30%
Region 17.1	T1PKS	182,519	230,293	4-epi-15-epi-brefeldin A	Polyketide:Iterative type I	30%
Region 21.1	T1PKS	186,225	233,905
Region 24.1	T1PKS	204,666	259,114
Region 29.1	NRPS-like	261,566	304,383
Region 33.1	NRPS-like	196,152	231,505
Region 33.2	T1PKS,NRPS	388,772	434,905	pyranonigrin E	Polyketide	100%
Region 34.1	T1PKS,NRPS	202,591	263,110
Region 38.1	T1PKS	308,530	368,481	depudecin	Polyketide:Iterative type I	50%
Region 39.1	T1PKS	97,347	141,320	alternariol	Terpene	100%
Region 44.1	NRPS	273,028	313,330
Region 47.1	T1PKS	37,212	82,812
Region 54.1	T3PKS,T1PKS	3,281	54,054
Region 67.1	NRPS	47,954	93,376

No secondary metabolite regions were found in these records:: c00007_unitig_.. (original name was: unitig_280|quiver|quiver); c00008_unitig_.. (original name was: unitig_7|quiver|quiver); c00011_unitig_.. (original name was: unitig_16|quiver|quiver); c00012_unitig_.. (original name was: unitig_17|quiver|quiver); c00016_unitig_.. (original name was: unitig_295|quiver|quiver); c00018_unitig_.. (original name was: unitig_42|quiver|quiver); c00019_unitig_.. (original name was: unitig_21|quiver|quiver); c00020_unitig_.. (original name was: unitig_285|quiver|quiver); c00022_unitig_.. (original name was: unitig_3|quiver|quiver); c00023_unitig_.. (original name was: unitig_55|quiver|quiver); c00025_unitig_.. (original name was: unitig_45|quiver|quiver); c00026_unitig_.. (original name was: unitig_57|quiver|quiver); c00027_unitig_.. (original name was: unitig_44|quiver|quiver); c00028_unitig_.. (original name was: unitig_58|quiver|quiver); c00030_unitig_.. (original name was: unitig_293|quiver|quiver); c00031_unitig_.. (original name was: unitig_59|quiver|quiver); c00032_unitig_.. (original name was: unitig_53|quiver|quiver); c00035_unitig_.. (original name was: unitig_286|quiver|quiver); c00036_unitig_.. (original name was: unitig_65|quiver|quiver); c00037_unitig_.. (original name was: unitig_61|quiver|quiver); c00040_unitig_.. (original name was: unitig_50|quiver|quiver); c00041_unitig_.. (original name was: unitig_24|quiver|quiver); c00042_unitig_.. (original name was: unitig_20|quiver|quiver); c00043_unitig_.. (original name was: unitig_277|quiver|quiver); c00045_unitig_.. (original name was: unitig_80|quiver|quiver); c00046_unitig_.. (original name was: unitig_290|quiver|quiver); c00048_unitig_.. (original name was: unitig_68|quiver|quiver); c00049_unitig_.. (original name was: unitig_90|quiver|quiver); c00050_unitig_.. (original name was: unitig_89|quiver|quiver); c00051_unitig_.. (original name was: unitig_296|quiver|quiver); c00052_unitig_.. (original name was: unitig_81|quiver|quiver); c00053_unitig_.. (original name was: unitig_56|quiver|quiver); c00055_unitig_.. (original name was: unitig_2|quiver|quiver); c00056_unitig_.. (original name was: unitig_292|quiver|quiver); c00057_unitig_.. (original name was: unitig_92|quiver|quiver); c00058_unitig_.. (original name was: unitig_34|quiver|quiver); c00059_unitig_.. (original name was: unitig_84|quiver|quiver); c00060_unitig_.. (original name was: unitig_99|quiver|quiver); c00061_unitig_.. (original name was: unitig_13|quiver|quiver); c00062_unitig_.. (original name was: unitig_97|quiver|quiver); c00063_unitig_.. (original name was: unitig_102|quiver|quiver); c00064_unitig_.. (original name was: unitig_98|quiver|quiver); c00065_unitig_.. (original name was: unitig_46|quiver|quiver); c00066_unitig_.. (original name was: unitig_31|quiver|quiver); c00068_unitig_.. (original name was: unitig_291|quiver|quiver); c00069_unitig_.. (original name was: unitig_262|quiver|quiver); c00070_unitig_.. (original name was: unitig_284|quiver|quiver); c00071_unitig_.. (original name was: unitig_112|quiver|quiver); c00072_unitig_.. (original name was: unitig_88|quiver|quiver); c00073_unitig_.. (original name was: unitig_101|quiver|quiver); c00074_unitig_.. (original name was: unitig_240|quiver|quiver); c00075_unitig_.. (original name was: unitig_111|quiver|quiver); c00076_unitig_.. (original name was: unitig_83|quiver|quiver); c00077_unitig_.. (original name was: unitig_109|quiver|quiver); c00078_unitig_.. (original name was: unitig_115|quiver|quiver); c00079_unitig_.. (original name was: unitig_79|quiver|quiver); c00080_unitig_.. (original name was: unitig_113|quiver|quiver); c00081_unitig_.. (original name was: unitig_263|quiver|quiver); c00082_unitig_.. (original name was: unitig_261|quiver|quiver); c00083_unitig_.. (original name was: unitig_64|quiver|quiver); c00084_unitig_.. (original name was: unitig_246|quiver|quiver); c00085_unitig_.. (original name was: unitig_108|quiver|quiver); c00086_unitig_.. (original name was: unitig_268|quiver|quiver); c00087_unitig_.. (original name was: unitig_36|quiver|quiver); c00088_unitig_.. (original name was: unitig_119|quiver|quiver); c00089_unitig_.. (original name was: unitig_85|quiver|quiver); c00090_unitig_.. (original name was: unitig_86|quiver|quiver); c00091_unitig_.. (original name was: unitig_52|quiver|quiver); c00092_unitig_.. (original name was: unitig_54|quiver|quiver); c00093_unitig_.. (original name was: unitig_242|quiver|quiver); c00094_unitig_.. (original name was: unitig_60|quiver|quiver); c00095_unitig_.. (original name was: unitig_270|quiver|quiver); c00096_unitig_.. (original name was: unitig_266|quiver|quiver); c00097_unitig_.. (original name was: unitig_122|quiver|quiver); c00098_unitig_.. (original name was: unitig_126|quiver|quiver); c00099_unitig_.. (original name was: unitig_49|quiver|quiver); c00100_unitig_.. (original name was: unitig_107|quiver|quiver); c00101_unitig_.. (original name was: unitig_259|quiver|quiver); c00102_unitig_.. (original name was: unitig_103|quiver|quiver); c00103_unitig_.. (original name was: unitig_248|quiver|quiver); c00104_unitig_.. (original name was: unitig_120|quiver|quiver); c00105_unitig_.. (original name was: unitig_39|quiver|quiver); c00106_unitig_.. (original name was: unitig_297|quiver|quiver); c00107_unitig_.. (original name was: unitig_121|quiver|quiver); c00108_unitig_.. (original name was: unitig_43|quiver|quiver); c00109_unitig_.. (original name was: unitig_236|quiver|quiver); c00110_unitig_.. (original name was: unitig_124|quiver|quiver); c00111_unitig_.. (original name was: unitig_257|quiver|quiver); c00112_unitig_.. (original name was: unitig_269|quiver|quiver); c00113_unitig_.. (original name was: unitig_267|quiver|quiver); c00114_unitig_.. (original name was: unitig_142|quiver|quiver); c00115_unitig_.. (original name was: unitig_272|quiver|quiver); c00116_unitig_.. (original name was: unitig_123|quiver|quiver); c00117_unitig_.. (original name was: unitig_29|quiver|quiver); c00118_unitig_.. (original name was: unitig_282|quiver|quiver); c00119_unitig_.. (original name was: unitig_131|quiver|quiver); c00120_unitig_.. (original name was: unitig_129|quiver|quiver); c00121_unitig_.. (original name was: unitig_14|quiver|quiver); c00122_unitig_.. (original name was: unitig_264|quiver|quiver); c00123_unitig_.. (original name was: unitig_276|quiver|quiver); c00124_unitig_.. (original name was: unitig_252|quiver|quiver); c00125_unitig_.. (original name was: unitig_275|quiver|quiver); c00126_unitig_.. (original name was: unitig_117|quiver|quiver); c00127_unitig_.. (original name was: unitig_289|quiver|quiver); c00128_unitig_.. (original name was: unitig_130|quiver|quiver); c00129_unitig_.. (original name was: unitig_19|quiver|quiver); c00130_unitig_.. (original name was: unitig_144|quiver|quiver); c00131_unitig_.. (original name was: unitig_12|quiver|quiver); c00132_unitig_.. (original name was: unitig_288|quiver|quiver); c00133_unitig_.. (original name was: unitig_256|quiver|quiver); c00134_unitig_.. (original name was: unitig_94|quiver|quiver); c00135_unitig_.. (original name was: unitig_249|quiver|quiver); c00136_unitig_.. (original name was: unitig_260|quiver|quiver); c00137_unitig_.. (original name was: unitig_74|quiver|quiver); c00138_unitig_.. (original name was: unitig_35|quiver|quiver); c00139_unitig_.. (original name was: unitig_283|quiver|quiver); c00140_unitig_.. (original name was: unitig_23|quiver|quiver); c00141_unitig_.. (original name was: unitig_136|quiver|quiver); c00142_unitig_.. (original name was: unitig_258|quiver|quiver); c00143_unitig_.. (original name was: unitig_77|quiver|quiver); c00144_unitig_.. (original name was: unitig_133|quiver|quiver); c00145_unitig_.. (original name was: unitig_302|quiver|quiver); c00146_unitig_.. (original name was: unitig_128|quiver|quiver); c00147_unitig_.. (original name was: unitig_38|quiver|quiver); c00148_unitig_.. (original name was: unitig_298|quiver|quiver); c00149_unitig_.. (original name was: unitig_253|quiver|quiver); c00150_unitig_.. (original name was: unitig_143|quiver|quiver); c00151_unitig_.. (original name was: unitig_47|quiver|quiver); c00152_unitig_.. (original name was: unitig_33|quiver|quiver); c00153_unitig_.. (original name was: unitig_118|quiver|quiver); c00154_unitig_.. (original name was: unitig_75|quiver|quiver); c00155_unitig_.. (original name was: unitig_271|quiver|quiver); c00156_unitig_.. (original name was: unitig_76|quiver|quiver); c00157_unitig_.. (original name was: unitig_72|quiver|quiver); c00158_unitig_.. (original name was: unitig_69|quiver|quiver); c00159_unitig_.. (original name was: unitig_278|quiver|quiver); c00160_unitig_.. (original name was: unitig_6|quiver|quiver); c00161_unitig_.. (original name was: unitig_40|quiver|quiver); c00162_unitig_.. (original name was: unitig_247|quiver|quiver); c00163_unitig_.. (original name was: unitig_154|quiver|quiver); c00164_unitig_.. (original name was: unitig_239|quiver|quiver); c00165_unitig_.. (original name was: unitig_237|quiver|quiver); c00166_unitig_.. (original name was: unitig_96|quiver|quiver); c00167_unitig_.. (original name was: unitig_139|quiver|quiver); c00168_unitig_.. (original name was: unitig_95|quiver|quiver); c00169_unitig_.. (original name was: unitig_91|quiver|quiver); c00170_unitig_.. (original name was: unitig_32|quiver|quiver); c00171_unitig_.. (original name was: unitig_138|quiver|quiver); c00172_unitig_.. (original name was: unitig_37|quiver|quiver); c00173_unitig_.. (original name was: unitig_245|quiver|quiver); c00174_unitig_.. (original name was: unitig_238|quiver|quiver); c00175_unitig_.. (original name was: unitig_287|quiver|quiver); c00176_unitig_.. (original name was: unitig_196|quiver|quiver); c00177_unitig_.. (original name was: unitig_176|quiver|quiver); c00178_unitig_.. (original name was: unitig_251|quiver|quiver); c00179_unitig_.. (original name was: unitig_134|quiver|quiver); c00180_unitig_.. (original name was: unitig_212|quiver|quiver); c00181_unitig_.. (original name was: unitig_70|quiver|quiver); c00182_unitig_.. (original name was: unitig_137|quiver|quiver); c00183_unitig_.. (original name was: unitig_71|quiver|quiver); c00184_unitig_.. (original name was: unitig_73|quiver|quiver)

Compact view

c00001_unitig_.. - Region 1 - T1PKS

Download region GenBank file

Location: 51,551 - 91,181 nt. (total: 39,631 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 51550 - 91181:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

input.path1.gene13

PKS_AT (845..1137): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 58.3%; inactive: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 70.7
inactive: 50.8
Methoxymalonyl-CoA: 48.0
Methylmalonyl-CoA: 35.6
fatty_acid: 25.3
Ethylmalonyl-CoA: 16.6
CHC-CoA: 15.6
Propionyl-CoA: 14.8
2-Methylbutyryl-CoA: 12.9
Benzoyl-CoA: 11.9
trans-1,2-CPDA: 11.3
Isobutyryl-CoA: 10.0
Acetyl-CoA: 9.4
3-Methylbutyryl-CoA: 0.0

c00001_unitig_.. - Region 2 - terpene

Download region GenBank file

Location: 784,424 - 805,115 nt. (total: 20,692 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

ClusterBlast

KnownClusterBlast

SubClusterBlast

Similar gene clusters

Similar known gene clusters

Similar subclusters

No matches found.

c00001_unitig_.. - Region 3 - T1PKS

Download region GenBank file

Location: 1,250,684 - 1,310,573 nt. (total: 59,890 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 3, location 1250683 - 1310573:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk) + (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

input.path1.gene273

PKS_AT (232..526): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 94.4
Methoxymalonyl-CoA: 43.3
Methylmalonyl-CoA: 37.7
inactive: 35.3
Isobutyryl-CoA: 22.2
Benzoyl-CoA: 19.1
fatty_acid: 11.4
Propionyl-CoA: 11.3
Acetyl-CoA: 9.5
2-Methylbutyryl-CoA: 9.3
trans-1,2-CPDA: 0.0
Ethylmalonyl-CoA: 0.0
CHC-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

input.path1.gene276

PKS_AT (453..768): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Methylmalonyl-CoA: 66.7%; Ethylmalonyl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 85.8
Methoxymalonyl-CoA: 71.8
Malonyl-CoA: 68.6
Ethylmalonyl-CoA: 55.1
Isobutyryl-CoA: 52.6
Propionyl-CoA: 34.8
2-Methylbutyryl-CoA: 33.9
trans-1,2-CPDA: 25.0
Benzoyl-CoA: 23.7
CHC-CoA: 21.7
3-Methylbutyryl-CoA: 16.6
fatty_acid: 14.8
Acetyl-CoA: 14.4
inactive: 10.9

c00001_unitig_.. - Region 4 - T1PKS

Download region GenBank file

Location: 1,444,326 - 1,493,097 nt. (total: 48,772 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

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NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

c00002_unitig_.. - Region 1 - T1PKS

Download region GenBank file

Location: 592,340 - 637,516 nt. (total: 45,177 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

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NRPS/PKS domains

ClusterBlast

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Detailed domain annotation

Selected features only

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Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 592339 - 637516:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

input.path1.gene121

PKS_AT (339..660): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Methylmalonyl-CoA: 66.7%; Ethylmalonyl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 79.1
Methoxymalonyl-CoA: 77.1
Ethylmalonyl-CoA: 62.8
Isobutyryl-CoA: 48.7
Malonyl-CoA: 47.9
Propionyl-CoA: 23.6
Benzoyl-CoA: 22.1
fatty_acid: 19.3
2-Methylbutyryl-CoA: 18.3
trans-1,2-CPDA: 16.3
inactive: 13.2
CHC-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

c00002_unitig_.. - Region 2 - T1PKS

Download region GenBank file

Location: 1,778,193 - 1,823,979 nt. (total: 45,787 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

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NRPS/PKS domains

ClusterBlast

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Detailed domain annotation

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Similar known gene clusters

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No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 2, location 1778192 - 1823979:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

input.path1.gene363

PKS_AT (523..779): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 83.3%; inactive: 54.2%

minowa: Methoxymalonyl-CoA

Prediction, score:

Methoxymalonyl-CoA: 24.1
Malonyl-CoA: 18.2
Propionyl-CoA: 15.9
inactive: 12.3
Methylmalonyl-CoA: 7.1
2-Methylbutyryl-CoA: 4.2
3-Methylbutyryl-CoA: 0.1
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Isobutyryl-CoA: 0.0
Ethylmalonyl-CoA: 0.0
CHC-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0

c00003_unitig_.. - Region 1 - T1PKS

Download region GenBank file

Location: 49,787 - 66,265 nt. (total: 16,479 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

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NRPS/PKS domains

ClusterBlast

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Detailed domain annotation

Selected features only

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Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 49786 - 66265:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

input.path1.gene1

PKS_AT (275..528): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; Methylmalonyl-CoA: 62.5%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 68.1
Methoxymalonyl-CoA: 64.1
Malonyl-CoA: 46.0
Ethylmalonyl-CoA: 37.8
Propionyl-CoA: 26.5
Isobutyryl-CoA: 25.5
fatty_acid: 21.7
Benzoyl-CoA: 20.8
trans-1,2-CPDA: 12.5
CHC-CoA: 10.9
inactive: 10.0
3-Methylbutyryl-CoA: 9.9
2-Methylbutyryl-CoA: 9.6
Acetyl-CoA: 0.0

c00003_unitig_.. - Region 2 - T1PKS

Download region GenBank file

Location: 627,627 - 663,011 nt. (total: 35,385 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

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ClusterBlast

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SubClusterBlast

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No matches found.

Similar subclusters

No matches found.

c00003_unitig_.. - Region 3 - T1PKS

Download region GenBank file

Location: 1,707,529 - 1,751,744 nt. (total: 44,216 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

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NRPS/PKS domains

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Detailed domain annotation

Selected features only

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Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 3, location 1707528 - 1751744:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

input.path1.gene380

PKS_AT (500..795): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 87.5%; Methylmalonyl-CoA: 62.5%; Methoxymalonyl-CoA: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 98.0
Methoxymalonyl-CoA: 68.7
Methylmalonyl-CoA: 64.1
inactive: 59.8
Propionyl-CoA: 29.2
Ethylmalonyl-CoA: 27.9
Isobutyryl-CoA: 23.0
2-Methylbutyryl-CoA: 20.9
CHC-CoA: 18.2
Benzoyl-CoA: 15.2
3-Methylbutyryl-CoA: 14.1
trans-1,2-CPDA: 13.4
Acetyl-CoA: 12.9
fatty_acid: 12.7

c00004_unitig_.. - Region 1 - NRPS-like

Download region GenBank file

Location: 396,879 - 440,134 nt. (total: 43,256 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

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NRPS/PKS domains

ClusterBlast

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Detailed domain annotation

Selected features only

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Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 396878 - 440134:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

input.path1.gene70

Search NORINE for peptide: strict or relaxed

AMP-binding (54..395): X

NRPSPredictor2: hydrophilic

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: vaefvggagk
Nearest Stachelhaus code:: N, A
Stachelhaus code match:: 0% (weak)

c00005_unitig_.. - Region 1 - T1PKS

Download region GenBank file

Location: 372,319 - 419,275 nt. (total: 46,957 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

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NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

No significant ClusterBlast hits found.

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 372318 - 419275:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

input.path1.gene81

PKS_AT (696..997): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 70.8%; inactive: 66.7%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 87.7
Methoxymalonyl-CoA: 54.6
Methylmalonyl-CoA: 50.2
inactive: 35.8
Propionyl-CoA: 18.1
Isobutyryl-CoA: 17.7
Ethylmalonyl-CoA: 15.1
CHC-CoA: 12.6
fatty_acid: 12.4
trans-1,2-CPDA: 11.7
Benzoyl-CoA: 9.7
2-Methylbutyryl-CoA: 6.6
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

c00006_unitig_.. - Region 1 - T1PKS

Download region GenBank file

Location: 444,951 - 493,272 nt. (total: 48,322 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

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NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 444950 - 493272:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

input.path1.gene107

PKS_AT (589..829): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; Methylmalonyl-CoA: 62.5%; Methoxymalonyl-CoA: 54.2%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 56.7
Methoxymalonyl-CoA: 48.5
Ethylmalonyl-CoA: 44.2
Propionyl-CoA: 28.8
Malonyl-CoA: 26.5
trans-1,2-CPDA: 25.0
Isobutyryl-CoA: 22.4
fatty_acid: 21.5
Benzoyl-CoA: 21.4
CHC-CoA: 19.4
2-Methylbutyryl-CoA: 18.1
3-Methylbutyryl-CoA: 10.5
inactive: 0.0
Acetyl-CoA: 0.0

c00006_unitig_.. - Region 2 - NRPS-like

Download region GenBank file

Location: 1,010,511 - 1,052,223 nt. (total: 41,713 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

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NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

No significant ClusterBlast hits found.

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

c00009_unitig_.. - Region 1 - NRPS-like

Download region GenBank file

Location: 39,438 - 82,916 nt. (total: 43,479 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

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NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

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Similar gene clusters

No significant ClusterBlast hits found.

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

c00009_unitig_.. - Region 2 - T1PKS

Download region GenBank file

Location: 618,435 - 666,874 nt. (total: 48,440 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

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NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 2, location 618434 - 666874:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

input.path1.gene103

PKS_AT (428..746): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 62.5%; Ethylmalonyl-CoA: 58.3%; Methylmalonyl-CoA: 58.3%

minowa: Methoxymalonyl-CoA

Prediction, score:

Methoxymalonyl-CoA: 78.6
Methylmalonyl-CoA: 76.3
Malonyl-CoA: 49.4
Isobutyryl-CoA: 49.4
Ethylmalonyl-CoA: 45.0
Benzoyl-CoA: 28.7
Propionyl-CoA: 22.3
trans-1,2-CPDA: 17.0
2-Methylbutyryl-CoA: 16.1
inactive: 15.1
CHC-CoA: 11.1
fatty_acid: 8.8
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

c00010_unitig_.. - Region 1 - terpene

Download region GenBank file

Location: 61,137 - 83,381 nt. (total: 22,245 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

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ClusterBlast

KnownClusterBlast

SubClusterBlast

Similar gene clusters

No significant ClusterBlast hits found.

Similar known gene clusters

Similar subclusters

No matches found.

c00010_unitig_.. - Region 2 - T1PKS

Download region GenBank file

Location: 188,522 - 236,159 nt. (total: 47,638 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

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NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 2, location 188521 - 236159:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

input.path1.gene50

PKS_AT (857..1151): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 62.5%; inactive: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 56.3
inactive: 47.4
Methoxymalonyl-CoA: 45.3
Methylmalonyl-CoA: 36.1
Propionyl-CoA: 23.7
Ethylmalonyl-CoA: 22.5
CHC-CoA: 22.4
2-Methylbutyryl-CoA: 20.9
Acetyl-CoA: 15.7
Isobutyryl-CoA: 15.5
trans-1,2-CPDA: 15.4
Benzoyl-CoA: 15.4
fatty_acid: 13.3
3-Methylbutyryl-CoA: 10.5

c00013_unitig_.. - Region 1 - T1PKS

Download region GenBank file

Location: 190,190 - 255,643 nt. (total: 65,454 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

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Gene details

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NRPS/PKS domains

ClusterBlast

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SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Similar known gene clusters

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 190189 - 255643:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk) + (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

input.path1.gene45

PKS_AT (528..832): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 87.5%; Methylmalonyl-CoA: 70.8%; 2-Methylbutyryl-CoA: 62.5%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 89.8
Methoxymalonyl-CoA: 77.3
Malonyl-CoA: 75.7
Isobutyryl-CoA: 46.5
Benzoyl-CoA: 37.8
Propionyl-CoA: 29.8
CHC-CoA: 28.4
trans-1,2-CPDA: 19.7
Acetyl-CoA: 19.0
2-Methylbutyryl-CoA: 14.5
inactive: 14.1
fatty_acid: 11.6
3-Methylbutyryl-CoA: 0.0
Ethylmalonyl-CoA: -3.5

input.path1.gene50

PKS_AT (600..894): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 62.5%; Methylmalonyl-CoA: 54.2%; inactive: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 104.4
inactive: 67.3
Methoxymalonyl-CoA: 64.7
Methylmalonyl-CoA: 51.7
Isobutyryl-CoA: 42.1
Acetyl-CoA: 32.0
Benzoyl-CoA: 31.9
Propionyl-CoA: 26.5
2-Methylbutyryl-CoA: 25.5
fatty_acid: 23.4
Ethylmalonyl-CoA: 22.2
CHC-CoA: 19.1
trans-1,2-CPDA: 18.5
3-Methylbutyryl-CoA: 18.5

c00014_unitig_.. - Region 1 - T1PKS

Download region GenBank file

Location: 714,826 - 761,457 nt. (total: 46,632 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

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NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

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Similar gene clusters

Similar known gene clusters

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 714825 - 761457:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

input.path1.gene151

PKS_AT (823..1120): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; inactive: 58.3%; Methylmalonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 139.1
inactive: 69.7
Methoxymalonyl-CoA: 61.9
Methylmalonyl-CoA: 61.0
Propionyl-CoA: 42.6
Isobutyryl-CoA: 26.6
Ethylmalonyl-CoA: 21.2
2-Methylbutyryl-CoA: 19.4
Acetyl-CoA: 15.9
fatty_acid: 14.7
CHC-CoA: 10.5
Benzoyl-CoA: 10.1
trans-1,2-CPDA: 0.0
3-Methylbutyryl-CoA: 0.0

c00015_unitig_.. - Region 1 - NRPS,T1PKS,terpene

Download region GenBank file

Location: 719,187 - 805,485 nt. (total: 86,299 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

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NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Similar known gene clusters

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 719186 - 805485:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk) + (X)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 3, location 753051 - 801112:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk) + (X)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 4, location 761581 - 805485:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk) + (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

input.path1.gene189

PKS_AT (467..788): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Methylmalonyl-CoA: 66.7%; Ethylmalonyl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 77.5
Methoxymalonyl-CoA: 65.6
Ethylmalonyl-CoA: 61.8
Malonyl-CoA: 47.5
Isobutyryl-CoA: 42.7
fatty_acid: 40.7
trans-1,2-CPDA: 36.0
Benzoyl-CoA: 29.9
Propionyl-CoA: 27.0
2-Methylbutyryl-CoA: 18.2
Acetyl-CoA: 15.9
3-Methylbutyryl-CoA: 11.4
CHC-CoA: 9.9
inactive: 0.0

input.path1.gene190

Search NORINE for peptide: strict or relaxed

AMP-binding (180..593): X

NRPSPredictor2: glu, gln

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: glu, gln
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: nhdkfgsisk
Nearest Stachelhaus code:: N, A
Stachelhaus code match:: 0% (weak)

c00017_unitig_.. - Region 1 - T1PKS

Download region GenBank file

Location: 182,519 - 230,293 nt. (total: 47,775 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Similar known gene clusters

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 182518 - 230293:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

input.path1.gene18

PKS_AT (559..869): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 70.8%; Methylmalonyl-CoA: 58.3%; Ethylmalonyl-CoA: 54.2%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 67.3
Methoxymalonyl-CoA: 60.9
Malonyl-CoA: 41.8
Propionyl-CoA: 38.1
Ethylmalonyl-CoA: 33.1
fatty_acid: 27.7
3-Methylbutyryl-CoA: 19.3
inactive: 18.8
Isobutyryl-CoA: 18.8
2-Methylbutyryl-CoA: 16.3
CHC-CoA: 11.7
trans-1,2-CPDA: 10.5
Benzoyl-CoA: 9.9
Acetyl-CoA: -0.7

c00021_unitig_.. - Region 1 - T1PKS

Download region GenBank file

Location: 186,225 - 233,905 nt. (total: 47,681 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 186224 - 233905:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

input.path1.gene29

PKS_AT (314..625): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 70.8%; Isobutyryl-CoA: 58.3%; Methylmalonyl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 66.7
Methoxymalonyl-CoA: 58.6
Malonyl-CoA: 32.2
Ethylmalonyl-CoA: 27.2
Propionyl-CoA: 25.3
inactive: 14.8
fatty_acid: 14.8
Isobutyryl-CoA: 14.8
trans-1,2-CPDA: 14.5
CHC-CoA: 13.2
Benzoyl-CoA: 10.9
3-Methylbutyryl-CoA: 10.6
Acetyl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

c00024_unitig_.. - Region 1 - T1PKS

Download region GenBank file

Location: 204,666 - 259,114 nt. (total: 54,449 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 204665 - 259114:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

input.path1.gene49

PKS_AT (516..814): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 87.5%; inactive: 62.5%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 118.8
inactive: 77.9
Methoxymalonyl-CoA: 48.4
Methylmalonyl-CoA: 46.7
Propionyl-CoA: 33.1
Isobutyryl-CoA: 22.5
Benzoyl-CoA: 19.0
2-Methylbutyryl-CoA: 13.5
Acetyl-CoA: 13.3
CHC-CoA: 11.2
fatty_acid: 11.1
Ethylmalonyl-CoA: 10.7
3-Methylbutyryl-CoA: 8.2
trans-1,2-CPDA: 0.0

input.path1.gene50

PKS_AT (446..757): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 70.8%; Methylmalonyl-CoA: 62.5%; Isobutyryl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 73.2
Methoxymalonyl-CoA: 72.9
Malonyl-CoA: 57.6
Ethylmalonyl-CoA: 44.2
Isobutyryl-CoA: 35.4
Propionyl-CoA: 21.7
inactive: 19.9
fatty_acid: 15.9
Acetyl-CoA: 15.3
Benzoyl-CoA: 14.0
trans-1,2-CPDA: 11.1
CHC-CoA: 9.2
3-Methylbutyryl-CoA: 9.1
2-Methylbutyryl-CoA: 0.0

c00029_unitig_.. - Region 1 - NRPS-like

Download region GenBank file

Location: 261,566 - 304,383 nt. (total: 42,818 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

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NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

c00033_unitig_.. - Region 1 - NRPS-like

Download region GenBank file

Location: 196,152 - 231,505 nt. (total: 35,354 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 196151 - 231505:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

input.path1.gene41

Search NORINE for peptide: strict or relaxed

AMP-binding (65..397): X

NRPSPredictor2: hydrophilic

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: dvmlagcack
Nearest Stachelhaus code:: N, A
Stachelhaus code match:: 0% (weak)

c00033_unitig_.. - Region 2 - NRPS,T1PKS

Download region GenBank file

Location: 388,772 - 434,905 nt. (total: 46,134 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

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other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Similar known gene clusters

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 2, location 388771 - 434905:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

input.path1.gene82

Search NORINE for peptide: strict or relaxed

PKS_AT (579..889): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 66.7%; Methylmalonyl-CoA: 62.5%; Ethylmalonyl-CoA: 54.2%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 75.7
Methoxymalonyl-CoA: 73.2
Isobutyryl-CoA: 71.3
Malonyl-CoA: 39.1
3-Methylbutyryl-CoA: 38.7
Acetyl-CoA: 37.2
Ethylmalonyl-CoA: 34.3
Propionyl-CoA: 30.5
inactive: 30.4
Benzoyl-CoA: 29.4
trans-1,2-CPDA: 22.7
CHC-CoA: 15.9
fatty_acid: 14.2
2-Methylbutyryl-CoA: 5.6

AMP-binding (2886..3298): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: dlvyyatvqk
Nearest Stachelhaus code:: N, A
Stachelhaus code match:: 0% (weak)

c00034_unitig_.. - Region 1 - NRPS,T1PKS

Download region GenBank file

Location: 202,591 - 263,110 nt. (total: 60,520 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

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Gene details

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NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 202590 - 263110:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 2, location 202590 - 249253:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 3, location 218244 - 263110:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

input.path1.gene36

PKS_AT (403..702): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Ethylmalonyl-CoA: 62.5%; Methylmalonyl-CoA: 62.5%

minowa: Methoxymalonyl-CoA

Prediction, score:

Methoxymalonyl-CoA: 70.0
Methylmalonyl-CoA: 69.5
Malonyl-CoA: 56.9
Ethylmalonyl-CoA: 40.7
Isobutyryl-CoA: 30.5
Propionyl-CoA: 26.3
fatty_acid: 18.2
CHC-CoA: 15.5
inactive: 12.4
Benzoyl-CoA: 10.5
2-Methylbutyryl-CoA: 7.7
trans-1,2-CPDA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

input.path1.gene39

Search NORINE for peptide: strict or relaxed

AMP-binding (14..416): X

NRPSPredictor2: hydrophilic

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: dgfkygcvlk
Nearest Stachelhaus code:: N, A
Stachelhaus code match:: 0% (weak)

c00038_unitig_.. - Region 1 - T1PKS

Download region GenBank file

Location: 308,530 - 368,481 nt. (total: 59,952 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

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regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Similar known gene clusters

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 308529 - 368481:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal) + (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

input.path1.gene67

PKS_AT (507..706): mal

ATSignature: (unknown)

No matches above 50%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 31.6
Methoxymalonyl-CoA: 25.2
inactive: 21.7
Ethylmalonyl-CoA: 14.1
Methylmalonyl-CoA: 13.5
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Propionyl-CoA: 0.0
Isobutyryl-CoA: 0.0
CHC-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

input.path1.gene70

PKS_AT (547..859): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Methylmalonyl-CoA: 62.5%; Isobutyryl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 60.4
Malonyl-CoA: 50.0
Methoxymalonyl-CoA: 43.1
Isobutyryl-CoA: 30.6
Propionyl-CoA: 30.1
Ethylmalonyl-CoA: 23.0
Benzoyl-CoA: 15.6
2-Methylbutyryl-CoA: 14.7
3-Methylbutyryl-CoA: 13.7
fatty_acid: 11.5
trans-1,2-CPDA: 0.0
inactive: 0.0
CHC-CoA: 0.0
Acetyl-CoA: 0.0

c00039_unitig_.. - Region 1 - T1PKS

Download region GenBank file

Location: 97,347 - 141,320 nt. (total: 43,974 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Similar known gene clusters

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 97346 - 141320:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

input.path1.gene14

PKS_AT (459..750): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; inactive: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 86.6
Methylmalonyl-CoA: 52.4
inactive: 49.8
Methoxymalonyl-CoA: 46.5
Ethylmalonyl-CoA: 30.6
Propionyl-CoA: 26.8
fatty_acid: 26.3
2-Methylbutyryl-CoA: 24.8
Benzoyl-CoA: 20.3
CHC-CoA: 18.2
Isobutyryl-CoA: 13.8
Acetyl-CoA: 11.4
3-Methylbutyryl-CoA: 11.4
trans-1,2-CPDA: 9.5

c00044_unitig_.. - Region 1 - NRPS

Download region GenBank file

Location: 273,028 - 313,330 nt. (total: 40,303 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

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regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

c00047_unitig_.. - Region 1 - T1PKS

Download region GenBank file

Location: 37,212 - 82,812 nt. (total: 45,601 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

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resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

c00054_unitig_.. - Region 1 - T1PKS,T3PKS

Download region GenBank file

Location: 3,281 - 54,054 nt. (total: 50,774 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

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resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

No significant ClusterBlast hits found.

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

c00067_unitig_.. - Region 1 - NRPS

Download region GenBank file

Location: 47,954 - 93,376 nt. (total: 45,423 nt) Show pHMM detection rules used

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 47953 - 93376:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

input.path1.gene4

Search NORINE for peptide: strict or relaxed

AMP-binding (548..835): X

NRPSPredictor2: orn, lys, arg

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: orn, lys, arg
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: dfdsfgnvak
Nearest Stachelhaus code:: N, A
Stachelhaus code match:: 0% (weak)